Definition Pseudomonas fluorescens Pf0-1 chromosome, complete genome.
Accession NC_007492
Length 6,438,405

Click here to switch to the map view.

The map label for this gene is 77458889

Identifier: 77458889

GI number: 77458889

Start: 3059193

End: 3060938

Strand: Direct

Name: 77458889

Synonym: Pfl01_2664

Alternate gene names: NA

Gene position: 3059193-3060938 (Clockwise)

Preceding gene: 77458888

Following gene: 77458892

Centisome position: 47.51

GC content: 53.61

Gene sequence:

>1746_bases
ATGGAACAATTTAAACAGTTCAATGCCAGCAAGACCGAGGTGATCAAGTCGCTCGACAACCTCCAGAAACTGGTGGGCGC
GCTGGAGGCACTTGGGCTGGACGTCTCTCAGGACATCGAAAAGATCAGGAAGGCGATCGGCGACGTTCAGTCCGATGCCT
TGCGTATCGCTTTGCTGGGTGCATTTTCCGACGGCAAGACCAGCGTAGTTGCCGGCTGGCTGGGCCAGGTCATGAAAGAC
ATGAAGATCGACACCAATGAGTCTTCGGACGCATTGGCGATCTATCGTCCCGACAATCTTCAGGACCGTTGTGAGATTGT
TGACACTCCCGGTCTGTTCGGTGACAAGGAAAAGGCAGCTGAAAACGGCGCGCTGGTGCAATACGGCGATATCACCAAGA
ACTATATTTCCGAGGCGCATCTGATCTTCTATGTGGTCGATGCCACGAACCCGCTCAAGGAAAGTCACCAGGACATCGTC
CGCTGGGTACTGCGCGATCTTAACAAGTTGAGTTCGACCATTTTCGTCATCAATAAAATGGATGAAGTTGCCGATCTGCG
CGATGCCGAAGAGTTCGAGCAGCAGAGCACAATCAAAAAGAACAACCTGCTGGATAAATTGCAGCGTTTTGTCGACCTCT
CTGCGGCCGAGCGTGATGCGATCAATGTGGTCTGCGTAGCCTCCAACCCGAATAGCCGCGGACTGGAGTTCTGGCTGGAG
CAAAAGGACCTGTATGACCAGCGCTCGCGAATCAGCGAACTCAAAGTGGTGACGCAACAAGTACTCGATGGCAGCGGTCG
TGAAACCCTGATCAAGAAGACCGGCATCGATGTCGTGCGTGATGTGCTGGGCAAGAAAATCGCCCTGGCTCAGGACGAGT
TGATCAAGTTCAGGCTGTTGGCCGATAACCAGCGACGTGATTCCGCACGCATCCAGGAGGACATTGCCGAGGGCAAACGG
AAAGTCCTAGCGACGGTCGGCAACCTCTACGAAGAGTTGAACAACCTCGAAACCGATTTGCTTAACAGCATTCGCACATT
GCCGCGCGACCAGGTACGCGCCTTTCTCGAATCGCAGATTGGTTTTTCGAACAATGATATCGGCGAGAAGCTGCGCTTTC
GCATAGATCACCTGTTCAGCACCGCATTCAACCAGTCCTCAAGCATCATGAGCGGCATCAGTGCCAAGATCGAACATCAA
CTAGACAGCTCTTCGGACTTCGCCGACAGCATCACCGCGTCGGCGTTGTCAGCGTCGAGCCGTGCGCTGACGGCCGTATC
GAAAATTCCTGTTGAAAGCATCAAGAGTGGCGTATTCCTGGCCCGTGAGACCCTGAAAAACCTCACCGGCTATGTCTACA
AATTCAAACCTTGGGAAGCAACCAAGCTGGCTGCCAACATCAGCCGGTGGGCCGGCCCGATTGGTGCAGGCATTCAGGTG
TTGACTGACGTCATTAGTGTTGCCCAGCAGCAGCGTGCGGAAACCGAACTGAAACAGTTGCAGGGCGATTTGGCCGAAGT
GGTCAAAAGCTACTTTGCCGAGCCAATGAAACTGCTGATGGATCACGAAAAAGTCATGGATATTTTCGCGCCACAAATCA
AGGCGTTCGAGAAGATCCTGGTCGAGCAGGAAGCTAGCCTCGATGACCTGCGCAACCGCCAGACTCAACTGGCAGAGCTT
GAGACCCACTTAAGCCAAGCGTTTGACTCGCAAAATGTCATCGAAGGCGAGTACGGCGTGGTTTGA

Upstream 100 bases:

>100_bases
TTAACGGACGAACGCCGCAAGATGGCCGACGTCACTCGCTTGTTCGATGAAAAGATCGCCTCGATTCAGGCACTGAAAAA
CGAGGTGGGAGATAGACCCT

Downstream 100 bases:

>100_bases
TCCGGTGAGCCTGGCCAGCAGCCGCTGGCCAGGTTTTATATCAGCACGTCAGAGCAACCCTTCATTGTTCAGCTTCAAGC
GCGCGTAGAAGACAGCCGCA

Product: HSR1-like GTP-binding protein

Products: NA

Alternate protein names: LeoA Protein

Number of amino acids: Translated: 581; Mature: 581

Protein sequence:

>581_residues
MEQFKQFNASKTEVIKSLDNLQKLVGALEALGLDVSQDIEKIRKAIGDVQSDALRIALLGAFSDGKTSVVAGWLGQVMKD
MKIDTNESSDALAIYRPDNLQDRCEIVDTPGLFGDKEKAAENGALVQYGDITKNYISEAHLIFYVVDATNPLKESHQDIV
RWVLRDLNKLSSTIFVINKMDEVADLRDAEEFEQQSTIKKNNLLDKLQRFVDLSAAERDAINVVCVASNPNSRGLEFWLE
QKDLYDQRSRISELKVVTQQVLDGSGRETLIKKTGIDVVRDVLGKKIALAQDELIKFRLLADNQRRDSARIQEDIAEGKR
KVLATVGNLYEELNNLETDLLNSIRTLPRDQVRAFLESQIGFSNNDIGEKLRFRIDHLFSTAFNQSSSIMSGISAKIEHQ
LDSSSDFADSITASALSASSRALTAVSKIPVESIKSGVFLARETLKNLTGYVYKFKPWEATKLAANISRWAGPIGAGIQV
LTDVISVAQQQRAETELKQLQGDLAEVVKSYFAEPMKLLMDHEKVMDIFAPQIKAFEKILVEQEASLDDLRNRQTQLAEL
ETHLSQAFDSQNVIEGEYGVV

Sequences:

>Translated_581_residues
MEQFKQFNASKTEVIKSLDNLQKLVGALEALGLDVSQDIEKIRKAIGDVQSDALRIALLGAFSDGKTSVVAGWLGQVMKD
MKIDTNESSDALAIYRPDNLQDRCEIVDTPGLFGDKEKAAENGALVQYGDITKNYISEAHLIFYVVDATNPLKESHQDIV
RWVLRDLNKLSSTIFVINKMDEVADLRDAEEFEQQSTIKKNNLLDKLQRFVDLSAAERDAINVVCVASNPNSRGLEFWLE
QKDLYDQRSRISELKVVTQQVLDGSGRETLIKKTGIDVVRDVLGKKIALAQDELIKFRLLADNQRRDSARIQEDIAEGKR
KVLATVGNLYEELNNLETDLLNSIRTLPRDQVRAFLESQIGFSNNDIGEKLRFRIDHLFSTAFNQSSSIMSGISAKIEHQ
LDSSSDFADSITASALSASSRALTAVSKIPVESIKSGVFLARETLKNLTGYVYKFKPWEATKLAANISRWAGPIGAGIQV
LTDVISVAQQQRAETELKQLQGDLAEVVKSYFAEPMKLLMDHEKVMDIFAPQIKAFEKILVEQEASLDDLRNRQTQLAEL
ETHLSQAFDSQNVIEGEYGVV
>Mature_581_residues
MEQFKQFNASKTEVIKSLDNLQKLVGALEALGLDVSQDIEKIRKAIGDVQSDALRIALLGAFSDGKTSVVAGWLGQVMKD
MKIDTNESSDALAIYRPDNLQDRCEIVDTPGLFGDKEKAAENGALVQYGDITKNYISEAHLIFYVVDATNPLKESHQDIV
RWVLRDLNKLSSTIFVINKMDEVADLRDAEEFEQQSTIKKNNLLDKLQRFVDLSAAERDAINVVCVASNPNSRGLEFWLE
QKDLYDQRSRISELKVVTQQVLDGSGRETLIKKTGIDVVRDVLGKKIALAQDELIKFRLLADNQRRDSARIQEDIAEGKR
KVLATVGNLYEELNNLETDLLNSIRTLPRDQVRAFLESQIGFSNNDIGEKLRFRIDHLFSTAFNQSSSIMSGISAKIEHQ
LDSSSDFADSITASALSASSRALTAVSKIPVESIKSGVFLARETLKNLTGYVYKFKPWEATKLAANISRWAGPIGAGIQV
LTDVISVAQQQRAETELKQLQGDLAEVVKSYFAEPMKLLMDHEKVMDIFAPQIKAFEKILVEQEASLDDLRNRQTQLAEL
ETHLSQAFDSQNVIEGEYGVV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 64864; Mature: 64864

Theoretical pI: Translated: 4.81; Mature: 4.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEQFKQFNASKTEVIKSLDNLQKLVGALEALGLDVSQDIEKIRKAIGDVQSDALRIALLG
CCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHEEEEEEE
AFSDGKTSVVAGWLGQVMKDMKIDTNESSDALAIYRPDNLQDRCEIVDTPGLFGDKEKAA
ECCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCHHHEECCCCCCCCHHHHH
ENGALVQYGDITKNYISEAHLIFYVVDATNPLKESHQDIVRWVLRDLNKLSSTIFVINKM
CCCCEEEECCHHHHHHCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHEEEEECH
DEVADLRDAEEFEQQSTIKKNNLLDKLQRFVDLSAAERDAINVVCVASNPNSRGLEFWLE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCHHHHHH
QKDLYDQRSRISELKVVTQQVLDGSGRETLIKKTGIDVVRDVLGKKIALAQDELIKFRLL
HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
ADNQRRDSARIQEDIAEGKRKVLATVGNLYEELNNLETDLLNSIRTLPRDQVRAFLESQI
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHC
GFSNNDIGEKLRFRIDHLFSTAFNQSSSIMSGISAKIEHQLDSSSDFADSITASALSASS
CCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
RALTAVSKIPVESIKSGVFLARETLKNLTGYVYKFKPWEATKLAANISRWAGPIGAGIQV
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCEEEECCCCHHHHHHHHHHHCCCCCHHHHH
LTDVISVAQQQRAETELKQLQGDLAEVVKSYFAEPMKLLMDHEKVMDIFAPQIKAFEKIL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VEQEASLDDLRNRQTQLAELETHLSQAFDSQNVIEGEYGVV
HHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MEQFKQFNASKTEVIKSLDNLQKLVGALEALGLDVSQDIEKIRKAIGDVQSDALRIALLG
CCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHEEEEEEE
AFSDGKTSVVAGWLGQVMKDMKIDTNESSDALAIYRPDNLQDRCEIVDTPGLFGDKEKAA
ECCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCHHHEECCCCCCCCHHHHH
ENGALVQYGDITKNYISEAHLIFYVVDATNPLKESHQDIVRWVLRDLNKLSSTIFVINKM
CCCCEEEECCHHHHHHCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHEEEEECH
DEVADLRDAEEFEQQSTIKKNNLLDKLQRFVDLSAAERDAINVVCVASNPNSRGLEFWLE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCHHHHHH
QKDLYDQRSRISELKVVTQQVLDGSGRETLIKKTGIDVVRDVLGKKIALAQDELIKFRLL
HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
ADNQRRDSARIQEDIAEGKRKVLATVGNLYEELNNLETDLLNSIRTLPRDQVRAFLESQI
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHC
GFSNNDIGEKLRFRIDHLFSTAFNQSSSIMSGISAKIEHQLDSSSDFADSITASALSASS
CCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
RALTAVSKIPVESIKSGVFLARETLKNLTGYVYKFKPWEATKLAANISRWAGPIGAGIQV
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCEEEECCCCHHHHHHHHHHHCCCCCHHHHH
LTDVISVAQQQRAETELKQLQGDLAEVVKSYFAEPMKLLMDHEKVMDIFAPQIKAFEKIL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VEQEASLDDLRNRQTQLAELETHLSQAFDSQNVIEGEYGVV
HHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA