| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is kgtP [H]
Identifier: 77457499
GI number: 77457499
Start: 1445006
End: 1446340
Strand: Direct
Name: kgtP [H]
Synonym: Pfl01_1272
Alternate gene names: 77457499
Gene position: 1445006-1446340 (Clockwise)
Preceding gene: 77457498
Following gene: 77457500
Centisome position: 22.44
GC content: 60.45
Gene sequence:
>1335_bases ATGTCTAGACTGTCACTGTCCCTATCGAGTGAAAAAATAATGACAACCACCACCTCCCATTACACCGGCGAAGAGCGCAG CAAGCGCATCTTTGCCATTGTCGGTGCCTCGTCCGGCAACCTCGTCGAATGGTTCGACTTCTACGTCTACGCTTTCTGCG CGATCTACTTCGCCCCGGCGTTTTTTCCCTCGGACAACCCCACGGTGCAGCTGGTCAACACCGCTGGCGTTTTCGCCGCC GGGTTTCTGATGCGACCGATCGGCGGCTGGATTTTCGGCCGGGTCGCAGACAAGCACGGGCGCAAGAACTCGATGCTGAT CTCGATCCTGATGATGTGCTTCGGCTCGTTGTTGATCGCCTGTCTGCCGACCTACAAGGACATCGGCGTCTGGGCGCCGC TGTTGCTGTTGTTCGCGCGTCTGCTGCAAGGCCTGTCGGTGGGCGGTGAGTACGGCACCACCGCGACCTACATGAGCGAA GTCGCGCTCAAGGGCCAGCGCGGGTTCTTCGCCTCGTTCCAGTACGTGACCCTGATCGGCGGGCAACTGCTGGCGGTGCT GCTGGTGGTGATCCTGCAACAGTTCCTCACCGAAGAAGAATTGCGTGCCTACGGCTGGCGGATTCCGTTCGTGGTCGGTG CGGCCGCCGCGCTGATTTCGCTGTTCCTGCGTCGCTCGCTGAAAGAAACCACGAGCAAGGAAATGCGCGAGAACAAGGAC GCCGGCAGCATCCGCGCACTGTTCCGCGACCACAAGGCTGCGTTCATCACCGTGCTGGGTTACACCGCCGGCGGCTCGCT GATTTTCTACACCTTCACCACGTACATGCAGAAGTACCTGGTGAACACCGCCGGCATGCACGCCAAGACCGCCAGCTACA TCATGACCGGCGCGCTGTTCCTGTACATGTGCATGCAGCCGCTGTTCGGCATGCTCGCCGACAAGATCGGCCGGCGTAAC TCGATGCTCTGGTTCGGCGGCCTCGGCACGTTGTTCACAGTGCCGATCCTGCTCAGCCTGAAAAGTGTCGGCAGTCCGTT CCTGGCCTTTGTGCTGATCACCCTGGCGCTGGCGATCGTCAGTTTCTACACCTCGATCAGCGGTCTGGTGAAAGCCGAGA TGTTCCCGCCGGAAGTCCGCGCCCTCGGCGTCGGCCTGGCCTACGCGGTGGCTAACGCGATCTTCGGCGGGTCGGCCGAA TACGTGGCCCTGAGCCTCAAGGCTGGCGGCATGGAAAACGCGTTCTACTGGTATGTCACGATCATGATGGCCGTGGCATT CCTGTTCAGCCTGCGCTTGCCCAAAGAAGCGAAGTATTTGCACCACGACCTTTAA
Upstream 100 bases:
>100_bases ATTATTGAAAGAACACCGATCGCCACGCTCCGCGCTGATCGTTCCCACGCGGAGCGTGGGAACGATCAATACAGGATGTG GAACGGGACTGTTGCGAAGT
Downstream 100 bases:
>100_bases ACCGATGCGCGCGGGCCACACCGGCCCGCGCCGGCAAGGACTGTTTATGACTCAGCGACCGGGCAATCAATTGTTCGATG CCTACTTTACTGCCCGCGAT
Product: citrate-proton symport
Products: Proton [Cytoplasm]; 2-oxoglutarate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 444; Mature: 443
Protein sequence:
>444_residues MSRLSLSLSSEKIMTTTTSHYTGEERSKRIFAIVGASSGNLVEWFDFYVYAFCAIYFAPAFFPSDNPTVQLVNTAGVFAA GFLMRPIGGWIFGRVADKHGRKNSMLISILMMCFGSLLIACLPTYKDIGVWAPLLLLFARLLQGLSVGGEYGTTATYMSE VALKGQRGFFASFQYVTLIGGQLLAVLLVVILQQFLTEEELRAYGWRIPFVVGAAAALISLFLRRSLKETTSKEMRENKD AGSIRALFRDHKAAFITVLGYTAGGSLIFYTFTTYMQKYLVNTAGMHAKTASYIMTGALFLYMCMQPLFGMLADKIGRRN SMLWFGGLGTLFTVPILLSLKSVGSPFLAFVLITLALAIVSFYTSISGLVKAEMFPPEVRALGVGLAYAVANAIFGGSAE YVALSLKAGGMENAFYWYVTIMMAVAFLFSLRLPKEAKYLHHDL
Sequences:
>Translated_444_residues MSRLSLSLSSEKIMTTTTSHYTGEERSKRIFAIVGASSGNLVEWFDFYVYAFCAIYFAPAFFPSDNPTVQLVNTAGVFAA GFLMRPIGGWIFGRVADKHGRKNSMLISILMMCFGSLLIACLPTYKDIGVWAPLLLLFARLLQGLSVGGEYGTTATYMSE VALKGQRGFFASFQYVTLIGGQLLAVLLVVILQQFLTEEELRAYGWRIPFVVGAAAALISLFLRRSLKETTSKEMRENKD AGSIRALFRDHKAAFITVLGYTAGGSLIFYTFTTYMQKYLVNTAGMHAKTASYIMTGALFLYMCMQPLFGMLADKIGRRN SMLWFGGLGTLFTVPILLSLKSVGSPFLAFVLITLALAIVSFYTSISGLVKAEMFPPEVRALGVGLAYAVANAIFGGSAE YVALSLKAGGMENAFYWYVTIMMAVAFLFSLRLPKEAKYLHHDL >Mature_443_residues SRLSLSLSSEKIMTTTTSHYTGEERSKRIFAIVGASSGNLVEWFDFYVYAFCAIYFAPAFFPSDNPTVQLVNTAGVFAAG FLMRPIGGWIFGRVADKHGRKNSMLISILMMCFGSLLIACLPTYKDIGVWAPLLLLFARLLQGLSVGGEYGTTATYMSEV ALKGQRGFFASFQYVTLIGGQLLAVLLVVILQQFLTEEELRAYGWRIPFVVGAAAALISLFLRRSLKETTSKEMRENKDA GSIRALFRDHKAAFITVLGYTAGGSLIFYTFTTYMQKYLVNTAGMHAKTASYIMTGALFLYMCMQPLFGMLADKIGRRNS MLWFGGLGTLFTVPILLSLKSVGSPFLAFVLITLALAIVSFYTSISGLVKAEMFPPEVRALGVGLAYAVANAIFGGSAEY VALSLKAGGMENAFYWYVTIMMAVAFLFSLRLPKEAKYLHHDL
Specific function: Uptake of alpha-ketoglutarate across the boundary membrane with the concomitant import of a cation (symport system) [H]
COG id: COG0477
COG function: function code GEPR; Permeases of the major facilitator superfamily
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family [H]
Homologues:
Organism=Escherichia coli, GI1788942, Length=423, Percent_Identity=69.5035460992908, Blast_Score=571, Evalue=1e-164, Organism=Escherichia coli, GI1790550, Length=403, Percent_Identity=30.272952853598, Blast_Score=202, Evalue=4e-53, Organism=Escherichia coli, GI1788292, Length=409, Percent_Identity=31.0513447432763, Blast_Score=184, Evalue=8e-48, Organism=Escherichia coli, GI1789941, Length=440, Percent_Identity=31.5909090909091, Blast_Score=161, Evalue=6e-41, Organism=Escherichia coli, GI87082404, Length=317, Percent_Identity=28.7066246056782, Blast_Score=79, Evalue=8e-16, Organism=Escherichia coli, GI87082231, Length=332, Percent_Identity=25.3012048192771, Blast_Score=75, Evalue=1e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004736 - InterPro: IPR020846 - InterPro: IPR016196 - InterPro: IPR005828 - InterPro: IPR005829 [H]
Pfam domain/function: PF00083 Sugar_tr [H]
EC number: NA
Molecular weight: Translated: 48819; Mature: 48688
Theoretical pI: Translated: 9.70; Mature: 9.70
Prosite motif: PS50850 MFS ; PS00217 SUGAR_TRANSPORT_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRLSLSLSSEKIMTTTTSHYTGEERSKRIFAIVGASSGNLVEWFDFYVYAFCAIYFAPA CCCEEEECCCCEEEEEECCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHC FFPSDNPTVQLVNTAGVFAAGFLMRPIGGWIFGRVADKHGRKNSMLISILMMCFGSLLIA CCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH CLPTYKDIGVWAPLLLLFARLLQGLSVGGEYGTTATYMSEVALKGQRGFFASFQYVTLIG HHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHH GQLLAVLLVVILQQFLTEEELRAYGWRIPFVVGAAAALISLFLRRSLKETTSKEMRENKD HHHHHHHHHHHHHHHHCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC AGSIRALFRDHKAAFITVLGYTAGGSLIFYTFTTYMQKYLVNTAGMHAKTASYIMTGALF CHHHHHHHHHCCCEEEEEEEECCCCCEEEHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH LYMCMQPLFGMLADKIGRRNSMLWFGGLGTLFTVPILLSLKSVGSPFLAFVLITLALAIV HHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH SFYTSISGLVKAEMFPPEVRALGVGLAYAVANAIFGGSAEYVALSLKAGGMENAFYWYVT HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCHHHHHHH IMMAVAFLFSLRLPKEAKYLHHDL HHHHHHHHHHHCCCHHHHHHHCCC >Mature Secondary Structure SRLSLSLSSEKIMTTTTSHYTGEERSKRIFAIVGASSGNLVEWFDFYVYAFCAIYFAPA CCEEEECCCCEEEEEECCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHC FFPSDNPTVQLVNTAGVFAAGFLMRPIGGWIFGRVADKHGRKNSMLISILMMCFGSLLIA CCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH CLPTYKDIGVWAPLLLLFARLLQGLSVGGEYGTTATYMSEVALKGQRGFFASFQYVTLIG HHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHH GQLLAVLLVVILQQFLTEEELRAYGWRIPFVVGAAAALISLFLRRSLKETTSKEMRENKD HHHHHHHHHHHHHHHHCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC AGSIRALFRDHKAAFITVLGYTAGGSLIFYTFTTYMQKYLVNTAGMHAKTASYIMTGALF CHHHHHHHHHCCCEEEEEEEECCCCCEEEHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH LYMCMQPLFGMLADKIGRRNSMLWFGGLGTLFTVPILLSLKSVGSPFLAFVLITLALAIV HHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH SFYTSISGLVKAEMFPPEVRALGVGLAYAVANAIFGGSAEYVALSLKAGGMENAFYWYVT HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCHHHHHHH IMMAVAFLFSLRLPKEAKYLHHDL HHHHHHHHHHHCCCHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; 2-oxoglutarate [Periplasm] [C]
Specific reaction: Proton [Periplasm] + 2-oxoglutarate [Periplasm] = Proton [Cytoplasm] + 2-oxoglutarate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 2118499; 9205837; 9278503; 1709493; 2190187; 2053984; 8419306 [H]