| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is pcaG [H]
Identifier: 77457498
GI number: 77457498
Start: 1444347
End: 1444913
Strand: Direct
Name: pcaG [H]
Synonym: Pfl01_1271
Alternate gene names: 77457498
Gene position: 1444347-1444913 (Clockwise)
Preceding gene: 77457497
Following gene: 77457499
Centisome position: 22.43
GC content: 60.85
Gene sequence:
>567_bases ATGACCCTGACTGCGACCACGTCCCACACCGTCGGGCCGTATTACCACATCGGCCTGACCTGGCTGAACCGTGAAAACCT CGCCAACGAACTGACCCTCGGCCAGCGTGTGGCGATCACCGGGCAAGTGGTGGATGGAAACGGCGATGTCGTCAACGACG CCATGCTCGAAGTCTGGCAGGCCAACGCTGCCGGCAAATACGATCACCCTGAAGACGAGCAGGCCAAGCCGCTCGATCCG AATTTCGAAGGCTTCGGCCGGGTGCCGGTAGATGCCGATGGGCGCTTCCGTTTCACCACGATCAAACCGGGCACGGTCGA AGGCCTGAAAGGCACGACCCAGGCGCCGCATCTGGTGGTGCTGGTGTTTGCGCGCGGGTTGGTGAAGCACTTGCTGACGC GGATTTATTTCGAGGGCGATCCGGCGAACGTCAACGATCCACTGCTCGAATGCGTACCGGCCGAGCGCCGCGATACGTTG CTGGCGAAGCCGGATGCGGCGGGTGTCTATCAGTGGAATGTGATCCTGCAGGGCACTGATGCGGAAACTGTGTTCTTCGA TTATTGA
Upstream 100 bases:
>100_bases GCCGCTTTCGATCTGGAAAAAACCATTCCGTCCTACGCCCTCGCTTATCGCTGGGACATCGTGCTGCGCGGCCGCGAAGC CACGCCGATGGAGAAATGAG
Downstream 100 bases:
>100_bases AAGAACACCGATCGCCACGCTCCGCGCTGATCGTTCCCACGCGGAGCGTGGGAACGATCAATACAGGATGTGGAACGGGA CTGTTGCGAAGTATGTCTAG
Product: protocatechuate 3,4-dioxygenase subunit alpha
Products: NA
Alternate protein names: 3,4-PCD [H]
Number of amino acids: Translated: 188; Mature: 187
Protein sequence:
>188_residues MTLTATTSHTVGPYYHIGLTWLNRENLANELTLGQRVAITGQVVDGNGDVVNDAMLEVWQANAAGKYDHPEDEQAKPLDP NFEGFGRVPVDADGRFRFTTIKPGTVEGLKGTTQAPHLVVLVFARGLVKHLLTRIYFEGDPANVNDPLLECVPAERRDTL LAKPDAAGVYQWNVILQGTDAETVFFDY
Sequences:
>Translated_188_residues MTLTATTSHTVGPYYHIGLTWLNRENLANELTLGQRVAITGQVVDGNGDVVNDAMLEVWQANAAGKYDHPEDEQAKPLDP NFEGFGRVPVDADGRFRFTTIKPGTVEGLKGTTQAPHLVVLVFARGLVKHLLTRIYFEGDPANVNDPLLECVPAERRDTL LAKPDAAGVYQWNVILQGTDAETVFFDY >Mature_187_residues TLTATTSHTVGPYYHIGLTWLNRENLANELTLGQRVAITGQVVDGNGDVVNDAMLEVWQANAAGKYDHPEDEQAKPLDPN FEGFGRVPVDADGRFRFTTIKPGTVEGLKGTTQAPHLVVLVFARGLVKHLLTRIYFEGDPANVNDPLLECVPAERRDTLL AKPDAAGVYQWNVILQGTDAETVFFDY
Specific function: Plays an essential role in the utilization of numerous aromatic and hydroaromatic compounds via the beta-ketoadipate pathway [H]
COG id: COG3485
COG function: function code Q; Protocatechuate 3,4-dioxygenase beta subunit
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the intradiol ring-cleavage dioxygenase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000627 - InterPro: IPR015889 - InterPro: IPR012786 [H]
Pfam domain/function: PF00775 Dioxygenase_C [H]
EC number: =1.13.11.3 [H]
Molecular weight: Translated: 20680; Mature: 20549
Theoretical pI: Translated: 4.60; Mature: 4.60
Prosite motif: PS00083 INTRADIOL_DIOXYGENAS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLTATTSHTVGPYYHIGLTWLNRENLANELTLGQRVAITGQVVDGNGDVVNDAMLEVWQ CEEECCCCCCCCCEEEEEEEEECCHHHHHHHCCCCEEEEEEEEECCCCCCHHHHHHHHHH ANAAGKYDHPEDEQAKPLDPNFEGFGRVPVDADGRFRFTTIKPGTVEGLKGTTQAPHLVV CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCEEEH LVFARGLVKHLLTRIYFEGDPANVNDPLLECVPAERRDTLLAKPDAAGVYQWNVILQGTD HHHHHHHHHHHHHHEEECCCCCCCCCHHHHHCCCCCCCEEEECCCCCCEEEEEEEEECCC AETVFFDY CCEEEEEC >Mature Secondary Structure TLTATTSHTVGPYYHIGLTWLNRENLANELTLGQRVAITGQVVDGNGDVVNDAMLEVWQ EEECCCCCCCCCEEEEEEEEECCHHHHHHHCCCCEEEEEEEEECCCCCCHHHHHHHHHH ANAAGKYDHPEDEQAKPLDPNFEGFGRVPVDADGRFRFTTIKPGTVEGLKGTTQAPHLVV CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCEEEH LVFARGLVKHLLTRIYFEGDPANVNDPLLECVPAERRDTLLAKPDAAGVYQWNVILQGTD HHHHHHHHHHHHHHEEECCCCCCCCCHHHHHCCCCCCCEEEECCCCCCEEEEEEEEECCC AETVFFDY CCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2298704; 8063101 [H]