| Definition | Ralstonia eutropha JMP134 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007347 |
| Length | 3,806,533 |
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The map label for this gene is hisA [H]
Identifier: 73542790
GI number: 73542790
Start: 3414326
End: 3415072
Strand: Reverse
Name: hisA [H]
Synonym: Reut_A3106
Alternate gene names: 73542790
Gene position: 3415072-3414326 (Counterclockwise)
Preceding gene: 73542791
Following gene: 73542789
Centisome position: 89.72
GC content: 62.52
Gene sequence:
>747_bases ATGTTGCTCATTCCGGCCATCGACCTGAAGGACGGTCAGTGTGTACGCCTCAAACAAGGCGACATGGACCAGGCCACCGT CTTTTCCGAAGATCCCGCCGCCATGGCACGCCATTGGGTCAATCAAGGGGCGCGCCGCCTGCACTTGGTCGATCTCAACG GTGCATTTGTCGGCAAGCCCCGCAATGAAGCCGCCATCAAGGCCATCATCGCCGAGGTCGGCGACGAGATCCCGGTGCAG CTCGGCGGTGGCATCCGCGACCTGAACACCATCGAACGGTGGCTGGACGACGGCCTGTCGTACGTCATCATCGGCACCGC GGCGGTGAAGAACCCCGGTTTCCTGAAGGATGCCTGCTCGGCGTTCGGCGGTCACATCATCGTCGGACTCGATGCCAAGG ACGGCAAGGTGGCGACCGACGGCTGGAGCAAGCTGACCGGCCACGAGGTGGCGGACCTGGCACGCAAGTACGAAGACTAC GGCGTGGAGGCCATCATCTATACCGACATCGGACGCGACGGCATGCTGCAAGGGATCAATATCGATGCCACCGTCAAGCT GGCGCAGTCGATGTCGATCCCGGTAATTGCCAGCGGCGGCCTGTCCAACCTGGCCGATATCGACAACCTGTGCGCCGTGG AGAACGAAGGCGTGGAAGGCGTCATCTGCGGCCGTGCCATCTACTCCGGCGATCTCAACTTCACCGACGCGCAGGCGCGT GCGGACAAGCTGAGCAACGGGGAATAA
Upstream 100 bases:
>100_bases CAGCCAACGCCATTCTGGAATACTTGCCTATTGACCCGGACTGACCGGCCACTGGCCGGGCTGGCTCTATCTCTCTCACT CAACCACGCTCGTCACGATT
Downstream 100 bases:
>100_bases GCCAACGCGCCCCGCGGGGCGCTGCCACCGCCAGGCTGCTACCGGTCTCGCGGCGGACAAGGAATCTCATGCTAGCCAAA CGTATCATCCCCTGCCTCGA
Product: 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase
Products: NA
Alternate protein names: Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [H]
Number of amino acids: Translated: 248; Mature: 248
Protein sequence:
>248_residues MLLIPAIDLKDGQCVRLKQGDMDQATVFSEDPAAMARHWVNQGARRLHLVDLNGAFVGKPRNEAAIKAIIAEVGDEIPVQ LGGGIRDLNTIERWLDDGLSYVIIGTAAVKNPGFLKDACSAFGGHIIVGLDAKDGKVATDGWSKLTGHEVADLARKYEDY GVEAIIYTDIGRDGMLQGINIDATVKLAQSMSIPVIASGGLSNLADIDNLCAVENEGVEGVICGRAIYSGDLNFTDAQAR ADKLSNGE
Sequences:
>Translated_248_residues MLLIPAIDLKDGQCVRLKQGDMDQATVFSEDPAAMARHWVNQGARRLHLVDLNGAFVGKPRNEAAIKAIIAEVGDEIPVQ LGGGIRDLNTIERWLDDGLSYVIIGTAAVKNPGFLKDACSAFGGHIIVGLDAKDGKVATDGWSKLTGHEVADLARKYEDY GVEAIIYTDIGRDGMLQGINIDATVKLAQSMSIPVIASGGLSNLADIDNLCAVENEGVEGVICGRAIYSGDLNFTDAQAR ADKLSNGE >Mature_248_residues MLLIPAIDLKDGQCVRLKQGDMDQATVFSEDPAAMARHWVNQGARRLHLVDLNGAFVGKPRNEAAIKAIIAEVGDEIPVQ LGGGIRDLNTIERWLDDGLSYVIIGTAAVKNPGFLKDACSAFGGHIIVGLDAKDGKVATDGWSKLTGHEVADLARKYEDY GVEAIIYTDIGRDGMLQGINIDATVKLAQSMSIPVIASGGLSNLADIDNLCAVENEGVEGVICGRAIYSGDLNFTDAQAR ADKLSNGE
Specific function: Histidine biosynthesis; fourth step. [C]
COG id: COG0106
COG function: function code E; Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the hisA/hisF family [H]
Homologues:
Organism=Escherichia coli, GI87082028, Length=245, Percent_Identity=35.1020408163265, Blast_Score=134, Evalue=4e-33, Organism=Escherichia coli, GI1788336, Length=248, Percent_Identity=24.1935483870968, Blast_Score=69, Evalue=3e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR006062 - InterPro: IPR006063 - InterPro: IPR023016 - InterPro: IPR011060 [H]
Pfam domain/function: PF00977 His_biosynth [H]
EC number: =5.3.1.16 [H]
Molecular weight: Translated: 26335; Mature: 26335
Theoretical pI: Translated: 4.45; Mature: 4.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLIPAIDLKDGQCVRLKQGDMDQATVFSEDPAAMARHWVNQGARRLHLVDLNGAFVGKP CEEEEEEECCCCCEEEEECCCCCCEEEECCCHHHHHHHHHHCCCCEEEEEECCCEEECCC RNEAAIKAIIAEVGDEIPVQLGGGIRDLNTIERWLDDGLSYVIIGTAAVKNPGFLKDACS CCHHHHHHHHHHHCCCCCEEECCCCCHHHHHHHHHHCCCEEEEEEEEECCCCCCHHHHHH AFGGHIIVGLDAKDGKVATDGWSKLTGHEVADLARKYEDYGVEAIIYTDIGRDGMLQGIN HCCCEEEEEEECCCCEEECCCCHHCCCHHHHHHHHHHHHCCCEEEEEEECCCCCCEECCC IDATVKLAQSMSIPVIASGGLSNLADIDNLCAVENEGVEGVICGRAIYSGDLNFTDAQAR CCCEEEEHHHCCCCEEECCCCCCHHHHHHHHEECCCCCCEEEECCEEEECCCCCCHHHHH ADKLSNGE HHHCCCCC >Mature Secondary Structure MLLIPAIDLKDGQCVRLKQGDMDQATVFSEDPAAMARHWVNQGARRLHLVDLNGAFVGKP CEEEEEEECCCCCEEEEECCCCCCEEEECCCHHHHHHHHHHCCCCEEEEEECCCEEECCC RNEAAIKAIIAEVGDEIPVQLGGGIRDLNTIERWLDDGLSYVIIGTAAVKNPGFLKDACS CCHHHHHHHHHHHCCCCCEEECCCCCHHHHHHHHHHCCCEEEEEEEEECCCCCCHHHHHH AFGGHIIVGLDAKDGKVATDGWSKLTGHEVADLARKYEDYGVEAIIYTDIGRDGMLQGIN HCCCEEEEEEECCCCEEECCCCHHCCCHHHHHHHHHHHHCCCEEEEEEECCCCCCEECCC IDATVKLAQSMSIPVIASGGLSNLADIDNLCAVENEGVEGVICGRAIYSGDLNFTDAQAR CCCEEEEHHHCCCCEEECCCCCCHHHHHHHHEECCCCCCEEEECCEEEECCCCCCHHHHH ADKLSNGE HHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA