| Definition | Ralstonia eutropha JMP134 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007347 |
| Length | 3,806,533 |
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The map label for this gene is hisH
Identifier: 73542791
GI number: 73542791
Start: 3415188
End: 3415841
Strand: Reverse
Name: hisH
Synonym: Reut_A3107
Alternate gene names: 73542791
Gene position: 3415841-3415188 (Counterclockwise)
Preceding gene: 73542792
Following gene: 73542790
Centisome position: 89.74
GC content: 63.76
Gene sequence:
>654_bases ATGACTACCATAGCAATTGTGGATTACGGCGTGGGCAACCTGCGCTCGGTGGCGCAGGCCCTGCGGGCCGCGGCACCGGA GGCGGATGTGCGCGTGGTGGATGCCCCGGAAGGCATTCGGAGCGCGGATCGCGTGGTGCTGCCGGGGCAGGGCGCCATGC CTGACTGCATGTCGGCGCTGGGCGCTTCGGGGCTGCAGGAGGCGGTGATCGAGGCGGCAGCCAGCAAGCCGATGTTCGGT GTGTGCGTTGGCGAACAGATGCTGTTCGAGTCCAGCAGCGAAGCCAGGCCCGGCACCGACAAGACGCCTTGCCTGGGGCT GATGCCGGGTGAAGTCATCCGCTTCGAACTGGACGGGATGACCCAGCCGGACGGCTCGCGCTACAAGGTGCCGCAGATGG GCTGGAACCGCGTCAAACAGTCCAGGCCCCATCCGCTGTGGGATGGCATCCCGGACGAAAGCTGGTTTTACTTCGTGCAC AGCTACTTCGTGCGCGCGCAGGATCCGGCCCATATTGCCGGCGAAACGGAGTATGGGGTCGTGTTTACCAGTGCGGTAGC ACGCGATAATATTTTTGCCACGCAGTTCCACCCCGAAAAAAGCGCAGCCATGGGGTTGCAGCTTTACCGGAACTTCGTGC ACTGGAATCCCTGA
Upstream 100 bases:
>100_bases GCATCAATATCGGCACGCGCCTGATGGGGCTGATCCTGTCGGCGCTGGCCGTTGAATTCATTGTGGACGGGCTGAAGACA TTATTGCCTGTTTTGAAATC
Downstream 100 bases:
>100_bases AGATCCGATCCGAGCCAGCCAACGCCATTCTGGAATACTTGCCTATTGACCCGGACTGACCGGCCACTGGCCGGGCTGGC TCTATCTCTCTCACTCAACC
Product: imidazole glycerol phosphate synthase subunit HisH
Products: NA
Alternate protein names: IGP synthase glutamine amidotransferase subunit; IGP synthase subunit hisH; ImGP synthase subunit hisH; IGPS subunit hisH
Number of amino acids: Translated: 217; Mature: 216
Protein sequence:
>217_residues MTTIAIVDYGVGNLRSVAQALRAAAPEADVRVVDAPEGIRSADRVVLPGQGAMPDCMSALGASGLQEAVIEAAASKPMFG VCVGEQMLFESSSEARPGTDKTPCLGLMPGEVIRFELDGMTQPDGSRYKVPQMGWNRVKQSRPHPLWDGIPDESWFYFVH SYFVRAQDPAHIAGETEYGVVFTSAVARDNIFATQFHPEKSAAMGLQLYRNFVHWNP
Sequences:
>Translated_217_residues MTTIAIVDYGVGNLRSVAQALRAAAPEADVRVVDAPEGIRSADRVVLPGQGAMPDCMSALGASGLQEAVIEAAASKPMFG VCVGEQMLFESSSEARPGTDKTPCLGLMPGEVIRFELDGMTQPDGSRYKVPQMGWNRVKQSRPHPLWDGIPDESWFYFVH SYFVRAQDPAHIAGETEYGVVFTSAVARDNIFATQFHPEKSAAMGLQLYRNFVHWNP >Mature_216_residues TTIAIVDYGVGNLRSVAQALRAAAPEADVRVVDAPEGIRSADRVVLPGQGAMPDCMSALGASGLQEAVIEAAASKPMFGV CVGEQMLFESSSEARPGTDKTPCLGLMPGEVIRFELDGMTQPDGSRYKVPQMGWNRVKQSRPHPLWDGIPDESWFYFVHS YFVRAQDPAHIAGETEYGVVFTSAVARDNIFATQFHPEKSAAMGLQLYRNFVHWNP
Specific function: IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The hisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to hisF for the synthesis of IGP and AICAR
COG id: COG0118
COG function: function code E; Glutamine amidotransferase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 glutamine amidotransferase type-1 domain
Homologues:
Organism=Escherichia coli, GI1788334, Length=211, Percent_Identity=35.0710900473934, Blast_Score=112, Evalue=2e-26, Organism=Saccharomyces cerevisiae, GI6319725, Length=225, Percent_Identity=32, Blast_Score=99, Evalue=5e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): HIS5_CUPPJ (Q46WL6)
Other databases:
- EMBL: CP000090 - RefSeq: YP_297311.1 - ProteinModelPortal: Q46WL6 - GeneID: 3609698 - GenomeReviews: CP000090_GR - KEGG: reu:Reut_A3107 - NMPDR: fig|264198.3.peg.3547 - HOGENOM: HBG292341 - OMA: RPFFGIC - ProtClustDB: PRK13146 - BioCyc: REUT264198:REUT_A3107-MONOMER - GO: GO:0005737 - HAMAP: MF_00278 - InterPro: IPR017926 - InterPro: IPR000991 - InterPro: IPR010139 - InterPro: IPR016226 - PIRSF: PIRSF000495 - TIGRFAMs: TIGR01855
Pfam domain/function: PF00117 GATase
EC number: 2.4.2.-
Molecular weight: Translated: 23661; Mature: 23530
Theoretical pI: Translated: 5.04; Mature: 5.04
Prosite motif: PS51273 GATASE_TYPE_1; PS00442 GATASE_TYPE_I
Important sites: ACT_SITE 82-82 ACT_SITE 197-197 ACT_SITE 199-199
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTIAIVDYGVGNLRSVAQALRAAAPEADVRVVDAPEGIRSADRVVLPGQGAMPDCMSAL CCEEEEEECCCCCHHHHHHHHHHCCCCCCEEEEECCCCCCCCCEEEECCCCCCHHHHHHH GASGLQEAVIEAAASKPMFGVCVGEQMLFESSSEARPGTDKTPCLGLMPGEVIRFELDGM CCCHHHHHHHHHHHCCCEEEEECCHHHHHCCCCCCCCCCCCCCEEECCCCEEEEEEECCC TQPDGSRYKVPQMGWNRVKQSRPHPLWDGIPDESWFYFVHSYFVRAQDPAHIAGETEYGV CCCCCCEEECCCCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCE VFTSAVARDNIFATQFHPEKSAAMGLQLYRNFVHWNP EEEHHHHCCCEEEEEECCCHHHHHHHHHHHHHHCCCC >Mature Secondary Structure TTIAIVDYGVGNLRSVAQALRAAAPEADVRVVDAPEGIRSADRVVLPGQGAMPDCMSAL CEEEEEECCCCCHHHHHHHHHHCCCCCCEEEEECCCCCCCCCEEEECCCCCCHHHHHHH GASGLQEAVIEAAASKPMFGVCVGEQMLFESSSEARPGTDKTPCLGLMPGEVIRFELDGM CCCHHHHHHHHHHHCCCEEEEECCHHHHHCCCCCCCCCCCCCCEEECCCCEEEEEEECCC TQPDGSRYKVPQMGWNRVKQSRPHPLWDGIPDESWFYFVHSYFVRAQDPAHIAGETEYGV CCCCCCEEECCCCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCE VFTSAVARDNIFATQFHPEKSAAMGLQLYRNFVHWNP EEEHHHHCCCEEEEEECCCHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Transferases; Glycosyltransferases; Pentosyltransferases [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA