Definition | Staphylococcus aureus subsp. aureus COL chromosome, complete genome. |
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Accession | NC_002951 |
Length | 2,809,422 |
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The map label for this gene is hemN [H]
Identifier: 57651976
GI number: 57651976
Start: 1670210
End: 1671367
Strand: Reverse
Name: hemN [H]
Synonym: SACOL1640
Alternate gene names: 57651976
Gene position: 1671367-1670210 (Counterclockwise)
Preceding gene: 57651977
Following gene: 57651975
Centisome position: 59.49
GC content: 32.82
Gene sequence:
>1158_bases TTGGATAAAAAGTCTGAGAAGCGGGGCATTAAAATGACGGTACAAAGTGCATATATACATATTCCATTTTGTGTAAGAAT ATGTACATATTGTGATTTCAATAAATATTTTATACAGAATCAACCTGTAGATGAGTACTTAGATGCACTAATCACAGAAA TGTCTACAGCAAAATATAGGATCTTAAAGACCATGTATGTAGGTGGCGGCACACCAACGGCCCTTTCTATTAATCAGTTG GAAAGATTACTTAAAGCAATACGTGATACGTTTACAATCACAGGCGAGTATACATTTGAAGCAAATCCTGATGAGTTAAC TAAAGAGAAAGTCCAACTATTAGAGAAATATGGAGTAAAAAGGATTTCAATGGGCGTTCAAACATTCAAGCCGGAGTTAT TGTCTGTTTTAGGTAGAACGCACAATACTGAAGATATTTACACTTCGGTGTTAAATGCTAAAAACGCAGGTATTAAATCA ATCAGTTTAGATTTAATGTATCATTTACCGAAACAGACGATTGAAGATTTTGAACAAAGTTTAGATCTAGCTTTAGATAT GGATATTCAACATATTTCGAGTTACGGCTTAATACTTGAACCTAAAACCCAATTTTATAATATGTATAGAAAAGGCTTGC TCAAACTTCCTAATGAGGATTTAGGTGCTGACATGTATCAGTTGCTGATGTCTAAGATAGAACAATCTCCTTTCCATCAA TACGAAATATCTAATTTTGCATTAGATGGCCATGAATCAGAACATAATAAGGTTTACTGGTTTAATGAGGAATATTATGG ATTTGGAGCAGGTGCAAGTGGTTATGTAGATGGTGTGCGTTATACGAATATCAATCCAGTGAATCATTATATCAAAGCTA TAAATAAAGAAAGTAAAGCAATTTTAGTATCAAATAAACCTTCTTTGACTGAGAGAATGGAAGAAGAAATGTTTCTTGGG TTGCGTTTAAATGAAGGTGTGAGTAGTAGTAGGTTCAAAAAGAAGTTTGACCAATCTATTGAAAGTGTCTTTGGTCAAAC AATAAATAATTTAAAAGAGAAGGAATTAATTGTAGAAAAGAACGATGTGATTGCACTTACAAATAGAGGGAAAGTCATAG GTAATGAGGTTTTTGAAGCTTTCCTAATAAATGATTAA
Upstream 100 bases:
>100_bases GAATAAATATTAAAATGAATCGATATATTAGACAATCATTGATTAAACGTTAAAGTTAAAAGTAAGAATAATTGCAGATA GTCCAACAGGATATAGCCGA
Downstream 100 bases:
>100_bases AAAAATTGAAATTTCGAGTCTTTAACATTGACTTACTTTGACCAATTTGATAAATTATAATTAGCACTTGAGATAAGTGA GTGCTAATGAGGTGAAAACA
Product: coproporphyrinogen III oxidase
Products: NA
Alternate protein names: Coprogen oxidase; Coproporphyrinogenase [H]
Number of amino acids: Translated: 385; Mature: 385
Protein sequence:
>385_residues MDKKSEKRGIKMTVQSAYIHIPFCVRICTYCDFNKYFIQNQPVDEYLDALITEMSTAKYRILKTMYVGGGTPTALSINQL ERLLKAIRDTFTITGEYTFEANPDELTKEKVQLLEKYGVKRISMGVQTFKPELLSVLGRTHNTEDIYTSVLNAKNAGIKS ISLDLMYHLPKQTIEDFEQSLDLALDMDIQHISSYGLILEPKTQFYNMYRKGLLKLPNEDLGADMYQLLMSKIEQSPFHQ YEISNFALDGHESEHNKVYWFNEEYYGFGAGASGYVDGVRYTNINPVNHYIKAINKESKAILVSNKPSLTERMEEEMFLG LRLNEGVSSSRFKKKFDQSIESVFGQTINNLKEKELIVEKNDVIALTNRGKVIGNEVFEAFLIND
Sequences:
>Translated_385_residues MDKKSEKRGIKMTVQSAYIHIPFCVRICTYCDFNKYFIQNQPVDEYLDALITEMSTAKYRILKTMYVGGGTPTALSINQL ERLLKAIRDTFTITGEYTFEANPDELTKEKVQLLEKYGVKRISMGVQTFKPELLSVLGRTHNTEDIYTSVLNAKNAGIKS ISLDLMYHLPKQTIEDFEQSLDLALDMDIQHISSYGLILEPKTQFYNMYRKGLLKLPNEDLGADMYQLLMSKIEQSPFHQ YEISNFALDGHESEHNKVYWFNEEYYGFGAGASGYVDGVRYTNINPVNHYIKAINKESKAILVSNKPSLTERMEEEMFLG LRLNEGVSSSRFKKKFDQSIESVFGQTINNLKEKELIVEKNDVIALTNRGKVIGNEVFEAFLIND >Mature_385_residues MDKKSEKRGIKMTVQSAYIHIPFCVRICTYCDFNKYFIQNQPVDEYLDALITEMSTAKYRILKTMYVGGGTPTALSINQL ERLLKAIRDTFTITGEYTFEANPDELTKEKVQLLEKYGVKRISMGVQTFKPELLSVLGRTHNTEDIYTSVLNAKNAGIKS ISLDLMYHLPKQTIEDFEQSLDLALDMDIQHISSYGLILEPKTQFYNMYRKGLLKLPNEDLGADMYQLLMSKIEQSPFHQ YEISNFALDGHESEHNKVYWFNEEYYGFGAGASGYVDGVRYTNINPVNHYIKAINKESKAILVSNKPSLTERMEEEMFLG LRLNEGVSSSRFKKKFDQSIESVFGQTINNLKEKELIVEKNDVIALTNRGKVIGNEVFEAFLIND
Specific function: Anaerobic transformation of coproporphyrinogen-III into protoporphyrinogen-IX [H]
COG id: COG0635
COG function: function code H; Coproporphyrinogen III oxidase and related Fe-S oxidoreductases
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the anaerobic coproporphyrinogen-III oxidase family [H]
Homologues:
Organism=Homo sapiens, GI8922911, Length=263, Percent_Identity=33.4600760456274, Blast_Score=164, Evalue=2e-40, Organism=Escherichia coli, GI1789325, Length=387, Percent_Identity=31.5245478036176, Blast_Score=184, Evalue=8e-48, Organism=Escherichia coli, GI87082341, Length=388, Percent_Identity=25.2577319587629, Blast_Score=121, Evalue=7e-29,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006638 - InterPro: IPR004559 - InterPro: IPR010723 - InterPro: IPR007197 [H]
Pfam domain/function: PF06969 HemN_C; PF04055 Radical_SAM [H]
EC number: =1.3.99.22 [H]
Molecular weight: Translated: 44169; Mature: 44169
Theoretical pI: Translated: 5.92; Mature: 5.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDKKSEKRGIKMTVQSAYIHIPFCVRICTYCDFNKYFIQNQPVDEYLDALITEMSTAKYR CCCCCCCCCCEEEEEEEEEEHHHHHHHHHHCCCCHHHCCCCCHHHHHHHHHHHHHHHHHH ILKTMYVGGGTPTALSINQLERLLKAIRDTFTITGEYTFEANPDELTKEKVQLLEKYGVK HHHHEEECCCCCCEEEHHHHHHHHHHHHHHEEEEEEEEECCCHHHHHHHHHHHHHHHCCH RISMGVQTFKPELLSVLGRTHNTEDIYTSVLNAKNAGIKSISLDLMYHLPKQTIEDFEQS HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCEEEHHHHHHCCHHHHHHHHHH LDLALDMDIQHISSYGLILEPKTQFYNMYRKGLLKLPNEDLGADMYQLLMSKIEQSPFHQ HCEEECCCHHHHHCCCEEECCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCE YEISNFALDGHESEHNKVYWFNEEYYGFGAGASGYVDGVRYTNINPVNHYIKAINKESKA EECCCEEECCCCCCCCEEEEECCCEEECCCCCCCCCCCEEECCCCHHHHHHHHHCCCCCE ILVSNKPSLTERMEEEMFLGLRLNEGVSSSRFKKKFDQSIESVFGQTINNLKEKELIVEK EEEECCCHHHHHHHHHHEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEC NDVIALTNRGKVIGNEVFEAFLIND CCEEEEECCCCCHHHHHHHHHHCCC >Mature Secondary Structure MDKKSEKRGIKMTVQSAYIHIPFCVRICTYCDFNKYFIQNQPVDEYLDALITEMSTAKYR CCCCCCCCCCEEEEEEEEEEHHHHHHHHHHCCCCHHHCCCCCHHHHHHHHHHHHHHHHHH ILKTMYVGGGTPTALSINQLERLLKAIRDTFTITGEYTFEANPDELTKEKVQLLEKYGVK HHHHEEECCCCCCEEEHHHHHHHHHHHHHHEEEEEEEEECCCHHHHHHHHHHHHHHHCCH RISMGVQTFKPELLSVLGRTHNTEDIYTSVLNAKNAGIKSISLDLMYHLPKQTIEDFEQS HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCEEEHHHHHHCCHHHHHHHHHH LDLALDMDIQHISSYGLILEPKTQFYNMYRKGLLKLPNEDLGADMYQLLMSKIEQSPFHQ HCEEECCCHHHHHCCCEEECCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCE YEISNFALDGHESEHNKVYWFNEEYYGFGAGASGYVDGVRYTNINPVNHYIKAINKESKA EECCCEEECCCCCCCCEEEEECCCEEECCCCCCCCCCCEEECCCCHHHHHHHHHCCCCCE ILVSNKPSLTERMEEEMFLGLRLNEGVSSSRFKKKFDQSIESVFGQTINNLKEKELIVEK EEEECCCHHHHHHHHHHEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEC NDVIALTNRGKVIGNEVFEAFLIND CCEEEEECCCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8757728; 8969508; 9384377; 1339421 [H]