| Definition | Bacillus licheniformis ATCC 14580, complete genome. |
|---|---|
| Accession | NC_006322 |
| Length | 4,222,645 |
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The map label for this gene is metG [H]
Identifier: 52783895
GI number: 52783895
Start: 49915
End: 51903
Strand: Direct
Name: metG [H]
Synonym: BLi00051
Alternate gene names: 52783895
Gene position: 49915-51903 (Clockwise)
Preceding gene: 52783893
Following gene: 52783896
Centisome position: 1.18
GC content: 45.8
Gene sequence:
>1989_bases ATGCCGCAAGAAAAAAATACGTTTTACATCACTACACCCATTTATTACCCAAGTGGGAAGCTACATATTGGACATGCCTA CACGACCGTTGCAGGTGATGCGATGGCTCGTTATAAAAGACTGAGAGGCTTTGATGTCAGATACTTAACTGGTACAGATG AGCACGGACAAAAAATTCAGCAAACGGCGGAGAAGGAAAACATCACTCCGCAGGAATTGGTCGATCGTGCGGCAGAAGAC ATTCAGCAGCTTTGGAAAAAGCTCGACATATCCAATGACGACTTCATTCGGACGACAGAGGAACGTCATAAAAAAGTGAT CGAAAAGGTATTTCAGAAGCTGCTTGACAATGGTGACATATATCTTGATGAATATGAGGGCTGGTACAGCATCCCTGACG AAACGTTTTACACCGAAACCCAGCTCGTTGATGTCGAGCGAAACGAGAAAGGCGAAGTTATCGGAGGGAAAAGTCCTGAC AGCGGCCACCCCGTTGAGCTAATCAAAGAGGAATCTTACTTCTTCCGCATGGGAAAATACGCGGATCGGCTTCTCGCTTT CTATGAAGAAAATCCTGAATTCATCCAGCCTGAATCCCGGAAAAATGAAATGATCAACAACTTTATCAAACCGGGTCTTG AAGATTTGGCTGTTTCCCGGACGACGTTCGACTGGGGGATAAAAGTGCCCGGCAATCCGAAGCATGTCATCTATGTTTGG ATAGATGCGCTGTTTAATTACATTACGGCACTTGGCTTTAATACGGAAAACGATGAAAATTATCAAAAATATTGGCCGGC AGACGTTCATCTTGTCGGTAAGGAGATCGTCCGCTTCCATACCATTTACTGGCCGATTATGCTGATGGCATTGGACCTTC CGCTGCCGAAAAAGGTTTTTGCCCACGGGTGGCTGCTGATGAAAGATGGAAAAATGTCTAAATCAAAAGGCAATGTGGTT GACCCGGTCACATTAATCGACAGATACGGACTAGATGCATTGCGTTATTATCTTCTCCGCGAAGTGCCGTTCGGTTCTGA CGGCGTATTTACACCGGAAGGATTTGTCGAGCGGATTAACTATGATTTAGCGAATGATTTAGGCAACCTGCTGAACAGAA CGGTCGCCATGGTCAACAAATACTTTGACGGCCGGATTCAGTCGTATGAAGGCCCGGTTACCGCTTTTGACGAACCGTTG TCATCATTCTCGCAAAAGACAATTGAAGCGTACGAGCAGGCGATCGAAAATATGGAGTTTTCCGTTGCGCTTTCATCATT GTGGCAGTTTGTCAGCAGAACGAATAAATACATCGACGAGACAGCCCCTTGGGTACTGGCAAAAGATAAGGATAAAGAAA AAGAGCTTCAATCGGTCATGTACCATTTGGCGGAGTCATTGCGCATCACTGCTGTATTGCTGCAGCCGTTCTTAACGCAG ACGCCTGAAAAGATTTTCGCACAGCTTGGCGTTACGGATGCGTCACTGAAAACCTGGGACAGCATTCAAAGCTTCGGCCA GCTGAAATCTGTGACAGTTCAAAAAGGAGAACCATTGTTCCCGCGTCTTGAGGCGGAAGACGAAGTCGCTTATATCAAAT CAAAAATGCAGGGAACGGCTCCAAAAGAAGAACCAAAGCAAGAGGAAAAAGCACATGAACGGCTTCCGGAAATCACGATA GACGATTTTATGAGCACAGAGCTCAGAGTGGCTGAAGTCATTCATGCTGAACCCGTCAAAAAAGCGGATCGTCTGTTAAA ACTCCAGCTTGATTTAGGCTTTGAAAAACGCCAAGTCGTTTCAGGAATTGCCAAGCACTACAAACCTGAAGAGCTTGTCG GCCGGAAAGTCATTTGTGTAACAAATTTAAAACCGGTCAAACTAAGAGGAGAACTTTCTCAAGGCATGATATTGGCTGGA GAGGACAACGGCGTTCTCTCGCTTGCGGCGGTAGACAGTTCATTAGCAAACGGAACGCGAATCAAATAA
Upstream 100 bases:
>100_bases TAAAGAGGGATTATATATTGAGTATATACTGAATGAATACACATGCCGCTCTCGTCCTTTGGGCGGGAGTTTTTTGACAT TTTAATTGGGAGGTTCCATC
Downstream 100 bases:
>100_bases ATGCAGGCAAAGGGTGTTCCACGTGTAACATTTCGTCGAACACCTTTTGTTTTTTCGACAATTTCTTAAAAAGGTGGCAT TTTCATGTTATTTGATACAC
Product: methionyl-tRNA synthetase
Products: NA
Alternate protein names: Methionine--tRNA ligase; MetRS [H]
Number of amino acids: Translated: 662; Mature: 661
Protein sequence:
>662_residues MPQEKNTFYITTPIYYPSGKLHIGHAYTTVAGDAMARYKRLRGFDVRYLTGTDEHGQKIQQTAEKENITPQELVDRAAED IQQLWKKLDISNDDFIRTTEERHKKVIEKVFQKLLDNGDIYLDEYEGWYSIPDETFYTETQLVDVERNEKGEVIGGKSPD SGHPVELIKEESYFFRMGKYADRLLAFYEENPEFIQPESRKNEMINNFIKPGLEDLAVSRTTFDWGIKVPGNPKHVIYVW IDALFNYITALGFNTENDENYQKYWPADVHLVGKEIVRFHTIYWPIMLMALDLPLPKKVFAHGWLLMKDGKMSKSKGNVV DPVTLIDRYGLDALRYYLLREVPFGSDGVFTPEGFVERINYDLANDLGNLLNRTVAMVNKYFDGRIQSYEGPVTAFDEPL SSFSQKTIEAYEQAIENMEFSVALSSLWQFVSRTNKYIDETAPWVLAKDKDKEKELQSVMYHLAESLRITAVLLQPFLTQ TPEKIFAQLGVTDASLKTWDSIQSFGQLKSVTVQKGEPLFPRLEAEDEVAYIKSKMQGTAPKEEPKQEEKAHERLPEITI DDFMSTELRVAEVIHAEPVKKADRLLKLQLDLGFEKRQVVSGIAKHYKPEELVGRKVICVTNLKPVKLRGELSQGMILAG EDNGVLSLAAVDSSLANGTRIK
Sequences:
>Translated_662_residues MPQEKNTFYITTPIYYPSGKLHIGHAYTTVAGDAMARYKRLRGFDVRYLTGTDEHGQKIQQTAEKENITPQELVDRAAED IQQLWKKLDISNDDFIRTTEERHKKVIEKVFQKLLDNGDIYLDEYEGWYSIPDETFYTETQLVDVERNEKGEVIGGKSPD SGHPVELIKEESYFFRMGKYADRLLAFYEENPEFIQPESRKNEMINNFIKPGLEDLAVSRTTFDWGIKVPGNPKHVIYVW IDALFNYITALGFNTENDENYQKYWPADVHLVGKEIVRFHTIYWPIMLMALDLPLPKKVFAHGWLLMKDGKMSKSKGNVV DPVTLIDRYGLDALRYYLLREVPFGSDGVFTPEGFVERINYDLANDLGNLLNRTVAMVNKYFDGRIQSYEGPVTAFDEPL SSFSQKTIEAYEQAIENMEFSVALSSLWQFVSRTNKYIDETAPWVLAKDKDKEKELQSVMYHLAESLRITAVLLQPFLTQ TPEKIFAQLGVTDASLKTWDSIQSFGQLKSVTVQKGEPLFPRLEAEDEVAYIKSKMQGTAPKEEPKQEEKAHERLPEITI DDFMSTELRVAEVIHAEPVKKADRLLKLQLDLGFEKRQVVSGIAKHYKPEELVGRKVICVTNLKPVKLRGELSQGMILAG EDNGVLSLAAVDSSLANGTRIK >Mature_661_residues PQEKNTFYITTPIYYPSGKLHIGHAYTTVAGDAMARYKRLRGFDVRYLTGTDEHGQKIQQTAEKENITPQELVDRAAEDI QQLWKKLDISNDDFIRTTEERHKKVIEKVFQKLLDNGDIYLDEYEGWYSIPDETFYTETQLVDVERNEKGEVIGGKSPDS GHPVELIKEESYFFRMGKYADRLLAFYEENPEFIQPESRKNEMINNFIKPGLEDLAVSRTTFDWGIKVPGNPKHVIYVWI DALFNYITALGFNTENDENYQKYWPADVHLVGKEIVRFHTIYWPIMLMALDLPLPKKVFAHGWLLMKDGKMSKSKGNVVD PVTLIDRYGLDALRYYLLREVPFGSDGVFTPEGFVERINYDLANDLGNLLNRTVAMVNKYFDGRIQSYEGPVTAFDEPLS SFSQKTIEAYEQAIENMEFSVALSSLWQFVSRTNKYIDETAPWVLAKDKDKEKELQSVMYHLAESLRITAVLLQPFLTQT PEKIFAQLGVTDASLKTWDSIQSFGQLKSVTVQKGEPLFPRLEAEDEVAYIKSKMQGTAPKEEPKQEEKAHERLPEITID DFMSTELRVAEVIHAEPVKKADRLLKLQLDLGFEKRQVVSGIAKHYKPEELVGRKVICVTNLKPVKLRGELSQGMILAGE DNGVLSLAAVDSSLANGTRIK
Specific function: Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation [H]
COG id: COG0143
COG function: function code J; Methionyl-tRNA synthetase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 tRNA-binding domain [H]
Homologues:
Organism=Homo sapiens, GI24308436, Length=549, Percent_Identity=35.8834244080146, Blast_Score=324, Evalue=1e-88, Organism=Homo sapiens, GI14043022, Length=667, Percent_Identity=25.0374812593703, Blast_Score=169, Evalue=1e-41, Organism=Escherichia coli, GI1788432, Length=699, Percent_Identity=29.3276108726753, Blast_Score=300, Evalue=2e-82, Organism=Escherichia coli, GI1789455, Length=102, Percent_Identity=34.3137254901961, Blast_Score=65, Evalue=1e-11, Organism=Caenorhabditis elegans, GI212645096, Length=493, Percent_Identity=35.2941176470588, Blast_Score=299, Evalue=3e-81, Organism=Caenorhabditis elegans, GI71992781, Length=383, Percent_Identity=34.7258485639687, Blast_Score=214, Evalue=1e-55, Organism=Caenorhabditis elegans, GI17540794, Length=603, Percent_Identity=26.0364842454395, Blast_Score=154, Evalue=2e-37, Organism=Caenorhabditis elegans, GI71997510, Length=178, Percent_Identity=30.3370786516854, Blast_Score=66, Evalue=6e-11, Organism=Caenorhabditis elegans, GI71997517, Length=178, Percent_Identity=30.3370786516854, Blast_Score=66, Evalue=6e-11, Organism=Saccharomyces cerevisiae, GI6321610, Length=527, Percent_Identity=31.1195445920304, Blast_Score=270, Evalue=4e-73, Organism=Saccharomyces cerevisiae, GI6321704, Length=566, Percent_Identity=25.2650176678445, Blast_Score=138, Evalue=3e-33, Organism=Saccharomyces cerevisiae, GI6323414, Length=225, Percent_Identity=28.8888888888889, Blast_Score=66, Evalue=2e-11, Organism=Drosophila melanogaster, GI21358483, Length=561, Percent_Identity=32.0855614973262, Blast_Score=293, Evalue=3e-79, Organism=Drosophila melanogaster, GI24655311, Length=565, Percent_Identity=27.0796460176991, Blast_Score=171, Evalue=1e-42,
Paralogues:
None
Copy number: 871 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001412 - InterPro: IPR015413 - InterPro: IPR004495 - InterPro: IPR014758 - InterPro: IPR012340 - InterPro: IPR016027 - InterPro: IPR014729 - InterPro: IPR002547 - InterPro: IPR009080 - InterPro: IPR013155 [H]
Pfam domain/function: PF08264 Anticodon_1; PF09334 tRNA-synt_1g; PF01588 tRNA_bind [H]
EC number: =6.1.1.10 [H]
Molecular weight: Translated: 75795; Mature: 75664
Theoretical pI: Translated: 5.13; Mature: 5.13
Prosite motif: PS50886 TRBD ; PS00178 AA_TRNA_LIGASE_I
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPQEKNTFYITTPIYYPSGKLHIGHAYTTVAGDAMARYKRLRGFDVRYLTGTDEHGQKIQ CCCCCCEEEEECCEEECCCCEEECCHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHH QTAEKENITPQELVDRAAEDIQQLWKKLDISNDDFIRTTEERHKKVIEKVFQKLLDNGDI HHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEECHHHHHHHHHHHHHHHHHCCCCE YLDEYEGWYSIPDETFYTETQLVDVERNEKGEVIGGKSPDSGHPVELIKEESYFFRMGKY EEECCCCEECCCCCCEECCEEEEECCCCCCCCEECCCCCCCCCCHHHHHCCHHHHHHHHH ADRLLAFYEENPEFIQPESRKNEMINNFIKPGLEDLAVSRTTFDWGIKVPGNPKHVIYVW HHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCHHHHHHCCEEEECCEECCCCCCEEEEEE IDALFNYITALGFNTENDENYQKYWPADVHLVGKEIVRFHTIYWPIMLMALDLPLPKKVF HHHHHHHHHHHCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH AHGWLLMKDGKMSKSKGNVVDPVTLIDRYGLDALRYYLLREVPFGSDGVFTPEGFVERIN HCCEEEEECCCCCCCCCCCCCHHHHHHHHCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHC YDLANDLGNLLNRTVAMVNKYFDGRIQSYEGPVTAFDEPLSSFSQKTIEAYEQAIENMEF HHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHH SVALSSLWQFVSRTNKYIDETAPWVLAKDKDKEKELQSVMYHLAESLRITAVLLQPFLTQ HHHHHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC TPEKIFAQLGVTDASLKTWDSIQSFGQLKSVTVQKGEPLFPRLEAEDEVAYIKSKMQGTA CHHHHHHHHCCCCHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCHHHHHHHHHHCCCC PKEEPKQEEKAHERLPEITIDDFMSTELRVAEVIHAEPVKKADRLLKLQLDLGFEKRQVV CCCCCHHHHHHHHHCCCCCHHHHHCCHHHHHHHHHHCHHHHHHHEEEEEECCCCHHHHHH SGIAKHYKPEELVGRKVICVTNLKPVKLRGELSQGMILAGEDNGVLSLAAVDSSLANGTR HHHHHHCCCHHHHCCEEEEEECCCCEEEECCCCCCEEEEECCCCEEEEEECCHHHCCCCC IK CC >Mature Secondary Structure PQEKNTFYITTPIYYPSGKLHIGHAYTTVAGDAMARYKRLRGFDVRYLTGTDEHGQKIQ CCCCCEEEEECCEEECCCCEEECCHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHH QTAEKENITPQELVDRAAEDIQQLWKKLDISNDDFIRTTEERHKKVIEKVFQKLLDNGDI HHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEECHHHHHHHHHHHHHHHHHCCCCE YLDEYEGWYSIPDETFYTETQLVDVERNEKGEVIGGKSPDSGHPVELIKEESYFFRMGKY EEECCCCEECCCCCCEECCEEEEECCCCCCCCEECCCCCCCCCCHHHHHCCHHHHHHHHH ADRLLAFYEENPEFIQPESRKNEMINNFIKPGLEDLAVSRTTFDWGIKVPGNPKHVIYVW HHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCHHHHHHCCEEEECCEECCCCCCEEEEEE IDALFNYITALGFNTENDENYQKYWPADVHLVGKEIVRFHTIYWPIMLMALDLPLPKKVF HHHHHHHHHHHCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH AHGWLLMKDGKMSKSKGNVVDPVTLIDRYGLDALRYYLLREVPFGSDGVFTPEGFVERIN HCCEEEEECCCCCCCCCCCCCHHHHHHHHCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHC YDLANDLGNLLNRTVAMVNKYFDGRIQSYEGPVTAFDEPLSSFSQKTIEAYEQAIENMEF HHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHH SVALSSLWQFVSRTNKYIDETAPWVLAKDKDKEKELQSVMYHLAESLRITAVLLQPFLTQ HHHHHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC TPEKIFAQLGVTDASLKTWDSIQSFGQLKSVTVQKGEPLFPRLEAEDEVAYIKSKMQGTA CHHHHHHHHCCCCHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCHHHHHHHHHHCCCC PKEEPKQEEKAHERLPEITIDDFMSTELRVAEVIHAEPVKKADRLLKLQLDLGFEKRQVV CCCCCHHHHHHHHHCCCCCHHHHHCCHHHHHHHHHHCHHHHHHHEEEEEECCCCHHHHHH SGIAKHYKPEELVGRKVICVTNLKPVKLRGELSQGMILAGEDNGVLSLAAVDSSLANGTR HHHHHHCCCHHHHCCEEEEEECCCCEEEECCCCCCEEEEECCCCEEEEEECCHHHCCCCC IK CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7584024; 9384377 [H]