Definition Candidatus Protochlamydia amoebophila UWE25, complete genome.
Accession NC_005861
Length 2,414,465

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The map label for this gene is 46446400

Identifier: 46446400

GI number: 46446400

Start: 945656

End: 947563

Strand: Direct

Name: 46446400

Synonym: pc0766

Alternate gene names: NA

Gene position: 945656-947563 (Clockwise)

Preceding gene: 46446399

Following gene: 46446402

Centisome position: 39.17

GC content: 32.65

Gene sequence:

>1908_bases
ATGAAAAATAATTATCGGGAAATTATTTTACATGGATTAACAAAAGTGCTGCCCGAAGATTTTTTTGAATACAAAGAAAC
GGAGGAAGAAACAAGAGAGTATCAAAAGAATTTTTTTCGCCAATTAAATCCTTTGGTGACATGCTCTGATAATAAAAAAA
TTCCGGGCTCCTTATCTTTTTTTGCTCTATCAAAATTCCGTTCTAATTCCTTTAAGTTCTTTTTCAAAATGATTAGCCAT
TGGTTACTTCCAGATGAAAGTCTTAATGTCGTATTAGTTCATGCCTCAGATTTTCAATTAGCAGAGTTAAGTGGCGAAAT
TTACACGATTTGCGAAATTGTAGTCAGTGTAAAATCGGTATCTGAATTTGAAGAGATATGCAAACATTTTCCCATCATCA
GCACAGAAATAGCCTTGGGGATGCAATCAGAATTTTATGCGCAAAAAATATTAGAAATTAAAGGATTATCGGCTGACGAT
AAAACAACCTCAATTCGTCGTATGATTGCTCATTTAGTTAAACGTTTTCCTCACATTTATGGGGCGGATGTGTTTACAGA
AATGCAACATTTATTAGTTACATGTCGAGATGATTTTAAAGCAATCAGGCAACCTCGTCATTTAAGTCGGATCATAAGTA
TTCAATATTTGTTTAGAAAATCTTTAAGGGAAGCAATTAAGAAAAGATCTCATCGCCGTCATTTAAGTTTAAAAATATTT
CGCACTTTTCTCGTAACGCCGAAAGGTCGTAAAAGGGTGTTAGGATTACTTGTTGGCATTAATTTTTTGAGAGAACAAGA
AACATTTGGTGAAAAACATTTACTAAAAGCTATTCAGCATTATTTACCATCTTCTCAATCAGTTGAGCAATCATTTTTTA
TCAATAAACTTGGATCAGAAAATATTGGAATTTCCTATTTAGAAATAGAAAAAAAAGACGGCAGTGATTTTACAATTTTA
GAAATTCGTAAACTGCGAAAAGAGCTTCCGCATAATTTAAAAAATCGCATTGAGCATAAACAACATCCGATTTTTATGCC
ACGAAATGAAGAAGAAGTAATTCGGAATATGTTGATTTTGACAAATCAAATCAAATATTTACGAGACATTCCTCAAGTGT
TTATTACGTTTGATGAACAAGCTTATTCGCACCTTTATTTTACTGTCATTTTAGCACGCGTATTAAAACCAGATTCAGAA
AGTTTGACAAAGTTATTTCAATCTTATGAAATATCAGTTGAATACATCCCTGATAGAACAAAAATTACAGGGCACATACG
TAAAAAACATCCTAAAGAAGCGTCGGTATTTCGTTTAAAAATTTTGAAAGATGCATTTTTGCGGGCTGATCACTCAATCG
ATTTGTACAAAGCGAGGCAGGCTGTTGTAGGAGAGCTATCAAAGGTTGTTGGAGAAGTTAGAGACTATAATGGAGGGATG
ATTTCCAAGCAACATGAGCAACTTGTATTGATTCATAAATTACTTAAAGATACAAAAGATTATGACGAGTTATTATTAGA
AAACTTTTTCTATTCATTAGCCCCCGATATTATTCGTACTTTAATCGATCCGAAAGCTTTCAAAATTTTGTTTTTGATGT
TACTAGAAGGTTTAAAAAGCTATAAACATGAAAGCTATTATCTGAAATTTTACCATGAACCTTCTAATGCTTTTGCAATG
ATTATTTTAGAAGACCCCCTCGTAAAAGAAAGGATTTATAGAGCTGTTCACGATCTACATGTTCCTCATACAGAGCTTGC
ATACGCTTATACAAAAACAAGCGGAAATAATTGTATTGGGTATATTTGTTGTTCGCAAGATTCTAACGTAAGAGAATGTT
TTTTTCAGGCAATTAAACAGGAATTACAACACTGGGAAACGAACCAACCGAAATTTCTTATGCATTAG

Upstream 100 bases:

>100_bases
TCGATAAATCCAGTTTATGAAATCTCTTAACAATAACATGAAAAAACGCTCTAAACTTACTATTACTCCTCTTTTTGAAT
TTTCCGAAAATGATGAAATA

Downstream 100 bases:

>100_bases
CTTATGATTCTTTCTTATTAGTAAGCAATAATGTTAAATTCCTATCCTTTAAATAGAAGCTGTCTTTCCGCAATAGTTTT
TTTATATCAACTAATTAATT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 635; Mature: 635

Protein sequence:

>635_residues
MKNNYREIILHGLTKVLPEDFFEYKETEEETREYQKNFFRQLNPLVTCSDNKKIPGSLSFFALSKFRSNSFKFFFKMISH
WLLPDESLNVVLVHASDFQLAELSGEIYTICEIVVSVKSVSEFEEICKHFPIISTEIALGMQSEFYAQKILEIKGLSADD
KTTSIRRMIAHLVKRFPHIYGADVFTEMQHLLVTCRDDFKAIRQPRHLSRIISIQYLFRKSLREAIKKRSHRRHLSLKIF
RTFLVTPKGRKRVLGLLVGINFLREQETFGEKHLLKAIQHYLPSSQSVEQSFFINKLGSENIGISYLEIEKKDGSDFTIL
EIRKLRKELPHNLKNRIEHKQHPIFMPRNEEEVIRNMLILTNQIKYLRDIPQVFITFDEQAYSHLYFTVILARVLKPDSE
SLTKLFQSYEISVEYIPDRTKITGHIRKKHPKEASVFRLKILKDAFLRADHSIDLYKARQAVVGELSKVVGEVRDYNGGM
ISKQHEQLVLIHKLLKDTKDYDELLLENFFYSLAPDIIRTLIDPKAFKILFLMLLEGLKSYKHESYYLKFYHEPSNAFAM
IILEDPLVKERIYRAVHDLHVPHTELAYAYTKTSGNNCIGYICCSQDSNVRECFFQAIKQELQHWETNQPKFLMH

Sequences:

>Translated_635_residues
MKNNYREIILHGLTKVLPEDFFEYKETEEETREYQKNFFRQLNPLVTCSDNKKIPGSLSFFALSKFRSNSFKFFFKMISH
WLLPDESLNVVLVHASDFQLAELSGEIYTICEIVVSVKSVSEFEEICKHFPIISTEIALGMQSEFYAQKILEIKGLSADD
KTTSIRRMIAHLVKRFPHIYGADVFTEMQHLLVTCRDDFKAIRQPRHLSRIISIQYLFRKSLREAIKKRSHRRHLSLKIF
RTFLVTPKGRKRVLGLLVGINFLREQETFGEKHLLKAIQHYLPSSQSVEQSFFINKLGSENIGISYLEIEKKDGSDFTIL
EIRKLRKELPHNLKNRIEHKQHPIFMPRNEEEVIRNMLILTNQIKYLRDIPQVFITFDEQAYSHLYFTVILARVLKPDSE
SLTKLFQSYEISVEYIPDRTKITGHIRKKHPKEASVFRLKILKDAFLRADHSIDLYKARQAVVGELSKVVGEVRDYNGGM
ISKQHEQLVLIHKLLKDTKDYDELLLENFFYSLAPDIIRTLIDPKAFKILFLMLLEGLKSYKHESYYLKFYHEPSNAFAM
IILEDPLVKERIYRAVHDLHVPHTELAYAYTKTSGNNCIGYICCSQDSNVRECFFQAIKQELQHWETNQPKFLMH
>Mature_635_residues
MKNNYREIILHGLTKVLPEDFFEYKETEEETREYQKNFFRQLNPLVTCSDNKKIPGSLSFFALSKFRSNSFKFFFKMISH
WLLPDESLNVVLVHASDFQLAELSGEIYTICEIVVSVKSVSEFEEICKHFPIISTEIALGMQSEFYAQKILEIKGLSADD
KTTSIRRMIAHLVKRFPHIYGADVFTEMQHLLVTCRDDFKAIRQPRHLSRIISIQYLFRKSLREAIKKRSHRRHLSLKIF
RTFLVTPKGRKRVLGLLVGINFLREQETFGEKHLLKAIQHYLPSSQSVEQSFFINKLGSENIGISYLEIEKKDGSDFTIL
EIRKLRKELPHNLKNRIEHKQHPIFMPRNEEEVIRNMLILTNQIKYLRDIPQVFITFDEQAYSHLYFTVILARVLKPDSE
SLTKLFQSYEISVEYIPDRTKITGHIRKKHPKEASVFRLKILKDAFLRADHSIDLYKARQAVVGELSKVVGEVRDYNGGM
ISKQHEQLVLIHKLLKDTKDYDELLLENFFYSLAPDIIRTLIDPKAFKILFLMLLEGLKSYKHESYYLKFYHEPSNAFAM
IILEDPLVKERIYRAVHDLHVPHTELAYAYTKTSGNNCIGYICCSQDSNVRECFFQAIKQELQHWETNQPKFLMH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 74674; Mature: 74674

Theoretical pI: Translated: 9.30; Mature: 9.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNNYREIILHGLTKVLPEDFFEYKETEEETREYQKNFFRQLNPLVTCSDNKKIPGSLSF
CCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCEEECCCCCCCCCHHH
FALSKFRSNSFKFFFKMISHWLLPDESLNVVLVHASDFQLAELSGEIYTICEIVVSVKSV
HHHHHHHCCHHHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHCCHHHHHHHHHHHHHHH
SEFEEICKHFPIISTEIALGMQSEFYAQKILEIKGLSADDKTTSIRRMIAHLVKRFPHIY
HHHHHHHHHCCCEEHHHHHCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCC
GADVFTEMQHLLVTCRDDFKAIRQPRHLSRIISIQYLFRKSLREAIKKRSHRRHLSLKIF
CHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RTFLVTPKGRKRVLGLLVGINFLREQETFGEKHLLKAIQHYLPSSQSVEQSFFINKLGSE
HHHHCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHCCCC
NIGISYLEIEKKDGSDFTILEIRKLRKELPHNLKNRIEHKQHPIFMPRNEEEVIRNMLIL
CCCEEEEEEECCCCCCCHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH
TNQIKYLRDIPQVFITFDEQAYSHLYFTVILARVLKPDSESLTKLFQSYEISVEYIPDRT
HHHHHHHHHCHHHEEEECHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCEEEECCCCC
KITGHIRKKHPKEASVFRLKILKDAFLRADHSIDLYKARQAVVGELSKVVGEVRDYNGGM
HHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC
ISKQHEQLVLIHKLLKDTKDYDELLLENFFYSLAPDIIRTLIDPKAFKILFLMLLEGLKS
CCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH
YKHESYYLKFYHEPSNAFAMIILEDPLVKERIYRAVHDLHVPHTELAYAYTKTSGNNCIG
HCCCCEEEEEEECCCCCEEEEEECCCHHHHHHHHHHHHCCCCCHHHEEEEEECCCCCEEE
YICCSQDSNVRECFFQAIKQELQHWETNQPKFLMH
EEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MKNNYREIILHGLTKVLPEDFFEYKETEEETREYQKNFFRQLNPLVTCSDNKKIPGSLSF
CCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCEEECCCCCCCCCHHH
FALSKFRSNSFKFFFKMISHWLLPDESLNVVLVHASDFQLAELSGEIYTICEIVVSVKSV
HHHHHHHCCHHHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHCCHHHHHHHHHHHHHHH
SEFEEICKHFPIISTEIALGMQSEFYAQKILEIKGLSADDKTTSIRRMIAHLVKRFPHIY
HHHHHHHHHCCCEEHHHHHCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCC
GADVFTEMQHLLVTCRDDFKAIRQPRHLSRIISIQYLFRKSLREAIKKRSHRRHLSLKIF
CHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RTFLVTPKGRKRVLGLLVGINFLREQETFGEKHLLKAIQHYLPSSQSVEQSFFINKLGSE
HHHHCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHCCCC
NIGISYLEIEKKDGSDFTILEIRKLRKELPHNLKNRIEHKQHPIFMPRNEEEVIRNMLIL
CCCEEEEEEECCCCCCCHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH
TNQIKYLRDIPQVFITFDEQAYSHLYFTVILARVLKPDSESLTKLFQSYEISVEYIPDRT
HHHHHHHHHCHHHEEEECHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCEEEECCCCC
KITGHIRKKHPKEASVFRLKILKDAFLRADHSIDLYKARQAVVGELSKVVGEVRDYNGGM
HHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC
ISKQHEQLVLIHKLLKDTKDYDELLLENFFYSLAPDIIRTLIDPKAFKILFLMLLEGLKS
CCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH
YKHESYYLKFYHEPSNAFAMIILEDPLVKERIYRAVHDLHVPHTELAYAYTKTSGNNCIG
HCCCCEEEEEEECCCCCEEEEEECCCHHHHHHHHHHHHCCCCCHHHEEEEEECCCCCEEE
YICCSQDSNVRECFFQAIKQELQHWETNQPKFLMH
EEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA