Definition Mycobacterium avium subsp. paratuberculosis K-10, complete genome.
Accession NC_002944
Length 4,829,781

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The map label for this gene is 41410097

Identifier: 41410097

GI number: 41410097

Start: 4461009

End: 4461281

Strand: Reverse

Name: 41410097

Synonym: MAP3999c

Alternate gene names: NA

Gene position: 4461281-4461009 (Counterclockwise)

Preceding gene: 41410098

Following gene: 41410096

Centisome position: 92.37

GC content: 68.13

Gene sequence:

>273_bases
GTGGACCCGGCGGCGCTGGCCGACGCCGTGCAACGGATGGCCGAATTCCAGCGCTACGCCGAGGACATGATCGCCGAAAT
CGATTCTCGCGTAACGCGTTTGCACCAGACGTGGACGGGTGAGGGCGCCGCGGCGCATGCCGAGGCGCATCAGCATTGGG
TGCGCGGCGAGGCGATGATGCGCGAGGCGCTGGCGCAGCTCGGCAAGGCGGCCTCGACCGCGCACGGCAACTACACCGGG
GCGATGTCGAAGAATCTCGGCATGTGGTCGTGA

Upstream 100 bases:

>100_bases
CTGGCCCGCCTGGTCGGCCAGGCCGGCGAGGCCTATGCGAGCAACGAGGCCGGCGCCGCCCAGGCCGAACGGGCGGTGCG
CGGTGGCTGAGGCGTTCCGG

Downstream 100 bases:

>100_bases
CCCGATGGCGCCGCTGGCGTGTGATCCCACCGCCCTAGACCACGCCGGCGCCACCGTGGTGGCCGCCGGTGAGTCGTTGG
GTTCGGTGATCTCGACCTTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 90; Mature: 90

Protein sequence:

>90_residues
MDPAALADAVQRMAEFQRYAEDMIAEIDSRVTRLHQTWTGEGAAAHAEAHQHWVRGEAMMREALAQLGKAASTAHGNYTG
AMSKNLGMWS

Sequences:

>Translated_90_residues
MDPAALADAVQRMAEFQRYAEDMIAEIDSRVTRLHQTWTGEGAAAHAEAHQHWVRGEAMMREALAQLGKAASTAHGNYTG
AMSKNLGMWS
>Mature_90_residues
MDPAALADAVQRMAEFQRYAEDMIAEIDSRVTRLHQTWTGEGAAAHAEAHQHWVRGEAMMREALAQLGKAASTAHGNYTG
AMSKNLGMWS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ESAT-6 (esx) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010310 [H]

Pfam domain/function: PF06013 WXG100 [H]

EC number: NA

Molecular weight: Translated: 9871; Mature: 9871

Theoretical pI: Translated: 6.34; Mature: 6.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
7.8 %Met     (Translated Protein)
7.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
7.8 %Met     (Mature Protein)
7.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDPAALADAVQRMAEFQRYAEDMIAEIDSRVTRLHQTWTGEGAAAHAEAHQHWVRGEAMM
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
REALAQLGKAASTAHGNYTGAMSKNLGMWS
HHHHHHHHHHHHHCCCCCCCHHHCCCCCCC
>Mature Secondary Structure
MDPAALADAVQRMAEFQRYAEDMIAEIDSRVTRLHQTWTGEGAAAHAEAHQHWVRGEAMM
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
REALAQLGKAASTAHGNYTGAMSKNLGMWS
HHHHHHHHHHHHHCCCCCCCHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]