Definition Geobacter sulfurreducens PCA chromosome, complete genome.
Accession NC_002939
Length 3,814,139

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The map label for this gene is 39996867

Identifier: 39996867

GI number: 39996867

Start: 1930640

End: 1932040

Strand: Direct

Name: 39996867

Synonym: GSU1768

Alternate gene names: NA

Gene position: 1930640-1932040 (Clockwise)

Preceding gene: 39996860

Following gene: 39996916

Centisome position: 50.62

GC content: 57.17

Gene sequence:

>1401_bases
ATGTGCCCCATGCAGAATTACCCTTATGTTATCACTGTCTCCTCGGAAAAGGGAGGGGTCGGCAAGACCACTCTCGCCAC
CAACCTGGCAATCTATCTGAAGGCCCTCGACGAGAATCTGCCGGTTACCATCTTTTCCTTCGACAACCACTTCACCGTGG
ACCGGATGTTCGAGATCAGGGGGCAGAGGCTGACCGGCAGCGTGGCCGACCTGCTCATGGAATCTCCGCCCCGCGACCTG
ATCCACACCGGTCAGTACGGAGTCGGCTACATCCCTTCGTCCGCCAGCCTCAACGACCTCAAAGGATCCATTCGTGGGCC
CATGGTCCTGGCACGGCTTCTGGCCGCCTCACGTATTCCCGGAGTTCTCATCATCGACACGAGGCCCGACTTGGACATGC
TCACCCAGAATGCCCTGTTCGCGGCAGATCGGGCCATCATCCCAGTCAAGGACATGCCGAGTCTGGAGAATTGCCGCAAC
ATTTTCGCGTTGTTCGAACAGCGGGGTCTCGACCGCAAGAGTCTCAGCCTCATTCCCTGCCTCGTGGACGAACGAATCAA
GTTCGACGGCCCCTTCAACGACCAGAAAACACTGCTCAAAGCTTACGCCATAAATCGCGGCTACCGTTGCCTCGATGTGT
ATATCTCCAAGAGTCCCAAGGTAGAGAGCCTCAATACCAACCCCGACGGGAAAATTTATCCGATTCTGACCCATGCCAAG
TGGACTGAAGTCCATGGTCAGTTCGCGCAGTTGGCCCAGATTCTCATCAATGAGTACAACGCCACCACGGAGCCTCGCTC
ACTCCTCTTCCATAAGTGGCTTCAGACCGAGGAAAGCCGCAAGAAGGAAGAGTTTTTCGCTCGGCTTTCAGGGATCAAGA
GCCAGTGCCTGCTTTGCGGCAAACCGGTGAGCGATGATGGAGACGGCCGTCACTCGTTCTACTTCGAGGTGTCCGACGGC
AGCGCGGCCGGTTTCTTTGAGGAAGAGTGCTTCCTCACCATGCTCATGACCAACATCTACAACATGGACGTGAGTATGGT
GGATGACGCCCCGACGGTTCATCTCATGCGCGATTCGTCCAGAGAGTCGGCCTTTGTCTTCCGGCCGGCGTCGAACGGCG
GTGCCGTGGAGTTCCATCGGTTCAGTCTCGACGGTACGCTCCTGATCAAGAAGAATTACCCCCTCAGAGAATACGAAGGA
GGGCTGCTGCGACGGGAACGCAGCAGGCTTTACACCCTCATGACCGAAGCTCTGGGAACAGCGGGCGCCGGAAGCTCCGA
TCGTTTCATCCTTGTTCACCCGGTAACGCGGGACAATCCCCAGGGGATTCTGCGGGACGAGAGCTACCGGGGTCTCACCA
AGCTCAAACAGCACATCGCGGCCCAGATTGCTTCATCGTAA

Upstream 100 bases:

>100_bases
ACGGGAACCCCGGGTTAAAGTTATTTAGTATCAAATAGATATAATTCAGGGGCAACGGCCTGTCAAACCGGGTTGACCGC
TGTCAGGCGGACAGTGTAGT

Downstream 100 bases:

>100_bases
CGCCCCTGCTACCTGACCAGCCTCGACACCGTCACAAAGGTGATCCCCTCGTCCCGCAGACGCGGTAACTCGACGGCAAG
GGTCTGGATGGTGGCAGGAT

Product: ParA family protein

Products: NA

Alternate protein names: Chromosome Partitioning ATPase; ATPase Involved In Chromosome Partitioning-Like Protein

Number of amino acids: Translated: 466; Mature: 466

Protein sequence:

>466_residues
MCPMQNYPYVITVSSEKGGVGKTTLATNLAIYLKALDENLPVTIFSFDNHFTVDRMFEIRGQRLTGSVADLLMESPPRDL
IHTGQYGVGYIPSSASLNDLKGSIRGPMVLARLLAASRIPGVLIIDTRPDLDMLTQNALFAADRAIIPVKDMPSLENCRN
IFALFEQRGLDRKSLSLIPCLVDERIKFDGPFNDQKTLLKAYAINRGYRCLDVYISKSPKVESLNTNPDGKIYPILTHAK
WTEVHGQFAQLAQILINEYNATTEPRSLLFHKWLQTEESRKKEEFFARLSGIKSQCLLCGKPVSDDGDGRHSFYFEVSDG
SAAGFFEEECFLTMLMTNIYNMDVSMVDDAPTVHLMRDSSRESAFVFRPASNGGAVEFHRFSLDGTLLIKKNYPLREYEG
GLLRRERSRLYTLMTEALGTAGAGSSDRFILVHPVTRDNPQGILRDESYRGLTKLKQHIAAQIASS

Sequences:

>Translated_466_residues
MCPMQNYPYVITVSSEKGGVGKTTLATNLAIYLKALDENLPVTIFSFDNHFTVDRMFEIRGQRLTGSVADLLMESPPRDL
IHTGQYGVGYIPSSASLNDLKGSIRGPMVLARLLAASRIPGVLIIDTRPDLDMLTQNALFAADRAIIPVKDMPSLENCRN
IFALFEQRGLDRKSLSLIPCLVDERIKFDGPFNDQKTLLKAYAINRGYRCLDVYISKSPKVESLNTNPDGKIYPILTHAK
WTEVHGQFAQLAQILINEYNATTEPRSLLFHKWLQTEESRKKEEFFARLSGIKSQCLLCGKPVSDDGDGRHSFYFEVSDG
SAAGFFEEECFLTMLMTNIYNMDVSMVDDAPTVHLMRDSSRESAFVFRPASNGGAVEFHRFSLDGTLLIKKNYPLREYEG
GLLRRERSRLYTLMTEALGTAGAGSSDRFILVHPVTRDNPQGILRDESYRGLTKLKQHIAAQIASS
>Mature_466_residues
MCPMQNYPYVITVSSEKGGVGKTTLATNLAIYLKALDENLPVTIFSFDNHFTVDRMFEIRGQRLTGSVADLLMESPPRDL
IHTGQYGVGYIPSSASLNDLKGSIRGPMVLARLLAASRIPGVLIIDTRPDLDMLTQNALFAADRAIIPVKDMPSLENCRN
IFALFEQRGLDRKSLSLIPCLVDERIKFDGPFNDQKTLLKAYAINRGYRCLDVYISKSPKVESLNTNPDGKIYPILTHAK
WTEVHGQFAQLAQILINEYNATTEPRSLLFHKWLQTEESRKKEEFFARLSGIKSQCLLCGKPVSDDGDGRHSFYFEVSDG
SAAGFFEEECFLTMLMTNIYNMDVSMVDDAPTVHLMRDSSRESAFVFRPASNGGAVEFHRFSLDGTLLIKKNYPLREYEG
GLLRRERSRLYTLMTEALGTAGAGSSDRFILVHPVTRDNPQGILRDESYRGLTKLKQHIAAQIASS

Specific function: Unknown

COG id: COG1192

COG function: function code D; ATPases involved in chromosome partitioning

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 52203; Mature: 52203

Theoretical pI: Translated: 7.27; Mature: 7.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCPMQNYPYVITVSSEKGGVGKTTLATNLAIYLKALDENLPVTIFSFDNHFTVDRMFEIR
CCCCCCCCEEEEEECCCCCCCCHHHHHHHHEEEEECCCCCCEEEEECCCCCCHHHHHHHC
GQRLTGSVADLLMESPPRDLIHTGQYGVGYIPSSASLNDLKGSIRGPMVLARLLAASRIP
CCCCCCHHHHHHHCCCCHHHHHCCCCCCEECCCCCCHHHHCCCCCHHHHHHHHHHHHCCC
GVLIIDTRPDLDMLTQNALFAADRAIIPVKDMPSLENCRNIFALFEQRGLDRKSLSLIPC
CEEEEECCCCHHHHHCCHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHCCCHHHCEEEHH
LVDERIKFDGPFNDQKTLLKAYAINRGYRCLDVYISKSPKVESLNTNPDGKIYPILTHAK
HHCCCEECCCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCEEEEEEECCC
WTEVHGQFAQLAQILINEYNATTEPRSLLFHKWLQTEESRKKEEFFARLSGIKSQCLLCG
HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHCCCHHEEEEC
KPVSDDGDGRHSFYFEVSDGSAAGFFEEECFLTMLMTNIYNMDVSMVDDAPTVHLMRDSS
CCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCEEEECCCCEEEEEECCC
RESAFVFRPASNGGAVEFHRFSLDGTLLIKKNYPLREYEGGLLRRERSRLYTLMTEALGT
CCCEEEEEECCCCCEEEEEEEECCEEEEEECCCCCHHHCCCHHHHHHHHHHHHHHHHHCC
AGAGSSDRFILVHPVTRDNPQGILRDESYRGLTKLKQHIAAQIASS
CCCCCCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCC
>Mature Secondary Structure
MCPMQNYPYVITVSSEKGGVGKTTLATNLAIYLKALDENLPVTIFSFDNHFTVDRMFEIR
CCCCCCCCEEEEEECCCCCCCCHHHHHHHHEEEEECCCCCCEEEEECCCCCCHHHHHHHC
GQRLTGSVADLLMESPPRDLIHTGQYGVGYIPSSASLNDLKGSIRGPMVLARLLAASRIP
CCCCCCHHHHHHHCCCCHHHHHCCCCCCEECCCCCCHHHHCCCCCHHHHHHHHHHHHCCC
GVLIIDTRPDLDMLTQNALFAADRAIIPVKDMPSLENCRNIFALFEQRGLDRKSLSLIPC
CEEEEECCCCHHHHHCCHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHCCCHHHCEEEHH
LVDERIKFDGPFNDQKTLLKAYAINRGYRCLDVYISKSPKVESLNTNPDGKIYPILTHAK
HHCCCEECCCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCEEEEEEECCC
WTEVHGQFAQLAQILINEYNATTEPRSLLFHKWLQTEESRKKEEFFARLSGIKSQCLLCG
HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHCCCHHEEEEC
KPVSDDGDGRHSFYFEVSDGSAAGFFEEECFLTMLMTNIYNMDVSMVDDAPTVHLMRDSS
CCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCEEEECCCCEEEEEECCC
RESAFVFRPASNGGAVEFHRFSLDGTLLIKKNYPLREYEGGLLRRERSRLYTLMTEALGT
CCCEEEEEECCCCCEEEEEEEECCEEEEEECCCCCHHHCCCHHHHHHHHHHHHHHHHHCC
AGAGSSDRFILVHPVTRDNPQGILRDESYRGLTKLKQHIAAQIASS
CCCCCCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA