Definition | Shigella flexneri 2a str. 2457T, complete genome. |
---|---|
Accession | NC_004741 |
Length | 4,599,354 |
Click here to switch to the map view.
The map label for this gene is insE1 [H]
Identifier: 30065063
GI number: 30065063
Start: 3963698
End: 3963997
Strand: Direct
Name: insE1 [H]
Synonym: S4064
Alternate gene names: 30065063
Gene position: 3963698-3963997 (Clockwise)
Preceding gene: 30065061
Following gene: 30065064
Centisome position: 86.18
GC content: 52.67
Gene sequence:
>300_bases ATGACAAAACCAGTATCAATCAGCAAGAAGCCCCGTAAACAACATACGCCTGAATTTCGTAACGAAGCCCTGAAACTCGC TGAACGCATCGGTGTGGCCGCCGCAGCCCGTGAACTCAGCCTGTATGAATCTCAGCTTTATGCCTGGCGCAGTAAACAGC AGCAACAAATGAGTTCGTCAGAGCGCGAAAGCGAACTGGCCGCTGAAAATGTCCGCCTTAAACGACAACTGGCGGAGCAG GCTGAGGAACTGTCCATCCTCCAAAAGGCCGCGACATACTTCGCGAAGCGCCTGAAATGA
Upstream 100 bases:
>100_bases TATATCAGAAAGCGCCCGTTTTAGTTTTAATGGAGGGTGATCTTACCCACCAATAGTGGACACAGGACTAAGTGAGTAAA CTCTCAACCAGAGGTGACTC
Downstream 100 bases:
>100_bases AGTATGTCTTTATCGAAAATCATCGGGCAGAGTTCAGCATCAAAGCGATGTGTCGTGTACTTCGGGTTGCCCGCAGCGGC TGGTATGTCTGGCTCAGGCG
Product: IS3 orfA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 99; Mature: 98
Protein sequence:
>99_residues MTKPVSISKKPRKQHTPEFRNEALKLAERIGVAAAARELSLYESQLYAWRSKQQQQMSSSERESELAAENVRLKRQLAEQ AEELSILQKAATYFAKRLK
Sequences:
>Translated_99_residues MTKPVSISKKPRKQHTPEFRNEALKLAERIGVAAAARELSLYESQLYAWRSKQQQQMSSSERESELAAENVRLKRQLAEQ AEELSILQKAATYFAKRLK >Mature_98_residues TKPVSISKKPRKQHTPEFRNEALKLAERIGVAAAARELSLYESQLYAWRSKQQQQMSSSERESELAAENVRLKRQLAEQA EELSILQKAATYFAKRLK
Specific function: Involved in the transposition of the insertion sequence IS3 [H]
COG id: COG2963
COG function: function code L; Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transposase 8 family [H]
Homologues:
Organism=Escherichia coli, GI226510958, Length=99, Percent_Identity=81.8181818181818, Blast_Score=159, Evalue=5e-41, Organism=Escherichia coli, GI226510933, Length=99, Percent_Identity=81.8181818181818, Blast_Score=159, Evalue=5e-41, Organism=Escherichia coli, GI226510930, Length=99, Percent_Identity=81.8181818181818, Blast_Score=159, Evalue=5e-41, Organism=Escherichia coli, GI226510928, Length=99, Percent_Identity=81.8181818181818, Blast_Score=159, Evalue=5e-41, Organism=Escherichia coli, GI226510927, Length=99, Percent_Identity=81.8181818181818, Blast_Score=159, Evalue=5e-41,
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002514 [H]
Pfam domain/function: PF01527 Transposase_8 [H]
EC number: NA
Molecular weight: Translated: 11405; Mature: 11274
Theoretical pI: Translated: 10.56; Mature: 10.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKPVSISKKPRKQHTPEFRNEALKLAERIGVAAAARELSLYESQLYAWRSKQQQQMSSS CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ERESELAAENVRLKRQLAEQAEELSILQKAATYFAKRLK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TKPVSISKKPRKQHTPEFRNEALKLAERIGVAAAARELSLYESQLYAWRSKQQQQMSSS CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ERESELAAENVRLKRQLAEQAEELSILQKAATYFAKRLK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2987844; 9278503 [H]