Definition | Shigella flexneri 2a str. 2457T, complete genome. |
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Accession | NC_004741 |
Length | 4,599,354 |
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The map label for this gene is insE1
Identifier: 30064021
GI number: 30064021
Start: 2751589
End: 2751888
Strand: Direct
Name: insE1
Synonym: S2861
Alternate gene names: 30064021
Gene position: 2751589-2751888 (Clockwise)
Preceding gene: 30064020
Following gene: 30064022
Centisome position: 59.83
GC content: 50.33
Gene sequence:
>300_bases ATGACAAAAACAGTATCAACCAGTAAAAAACCCCGTAAACAGCATTCGCCTGAATTTCGCAGTGAAGCCCTGAAGCTTGC TGAACGCATCGGTGTTACTGCCGCAGCCCGTGAACTCAGCCTGTATGAATCACAGCTCTACAACTGGCGCAGTAAACAGC AAAATCAGCAGACGTCTTCTGAACGTGAACTGGAGATGTCTACCGAGATTGCACGTCTCAAACGCCAGCTGGCAGAACGG GATGAAGAGCTGGCTATCCTCCAAAAGGCCGCGACATACTTCGCGAAGCGCCTGAAATGA
Upstream 100 bases:
>100_bases ATTCAGCGGCTTCATTGAGATCATCCAACGAATTTTGATCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACT CTCAGTCAGAGGTGACTCAC
Downstream 100 bases:
>100_bases AGTATGTCTTTATTGAAAAACATCAGGCTGAGTTCAGCATCAAAGCAATGTGCCGCGTGCTCCGGGTGGCCCGCAGCGGC TGGTATACGTGGTGTCAGCG
Product: IS3 orfA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 99; Mature: 98
Protein sequence:
>99_residues MTKTVSTSKKPRKQHSPEFRSEALKLAERIGVTAAARELSLYESQLYNWRSKQQNQQTSSERELEMSTEIARLKRQLAER DEELAILQKAATYFAKRLK
Sequences:
>Translated_99_residues MTKTVSTSKKPRKQHSPEFRSEALKLAERIGVTAAARELSLYESQLYNWRSKQQNQQTSSERELEMSTEIARLKRQLAER DEELAILQKAATYFAKRLK >Mature_98_residues TKTVSTSKKPRKQHSPEFRSEALKLAERIGVTAAARELSLYESQLYNWRSKQQNQQTSSERELEMSTEIARLKRQLAERD EELAILQKAATYFAKRLK
Specific function: Involved in the transposition of the insertion sequence IS3
COG id: COG2963
COG function: function code L; Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transposase 8 family
Homologues:
Organism=Escherichia coli, GI226510958, Length=99, Percent_Identity=100, Blast_Score=196, Evalue=3e-52, Organism=Escherichia coli, GI226510933, Length=99, Percent_Identity=100, Blast_Score=196, Evalue=3e-52, Organism=Escherichia coli, GI226510930, Length=99, Percent_Identity=100, Blast_Score=196, Evalue=3e-52, Organism=Escherichia coli, GI226510928, Length=99, Percent_Identity=100, Blast_Score=196, Evalue=3e-52, Organism=Escherichia coli, GI226510927, Length=99, Percent_Identity=100, Blast_Score=196, Evalue=3e-52,
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): INSE1_ECOLI (P0CF66)
Other databases:
- EMBL: X02311 - EMBL: U73857 - EMBL: U00096 - EMBL: AP009048 - PIR: A64845 - RefSeq: AP_000953.1 - RefSeq: AP_001024.1 - RefSeq: AP_001185.1 - RefSeq: AP_001656.1 - RefSeq: AP_002685.1 - RefSeq: NP_414832.2 - RefSeq: NP_414907.2 - RefSeq: NP_415072.2 - RefSeq: NP_415546.2 - RefSeq: NP_416592.2 - ProteinModelPortal: P0CF66 - SMR: P0CF66 - EnsemblBacteria: EBESCT00000000389 - EnsemblBacteria: EBESCT00000015472 - GeneID: 944952 - GeneID: 945584 - GeneID: 945759 - GeneID: 946616 - GeneID: 946900 - GenomeReviews: AP009048_GR - GenomeReviews: U00096_GR - KEGG: ecj:JW5036 - KEGG: eco:b0298 - EchoBASE: EB4709 - EcoGene: EG40005 - eggNOG: COG2963 - GeneTree: EBGT00050000008545 - HOGENOM: HBG756815 - InterPro: IPR002514
Pfam domain/function: PF01527 Transposase_8
EC number: NA
Molecular weight: Translated: 11543; Mature: 11412
Theoretical pI: Translated: 10.56; Mature: 10.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKTVSTSKKPRKQHSPEFRSEALKLAERIGVTAAARELSLYESQLYNWRSKQQNQQTSS CCCCCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ERELEMSTEIARLKRQLAERDEELAILQKAATYFAKRLK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TKTVSTSKKPRKQHSPEFRSEALKLAERIGVTAAARELSLYESQLYNWRSKQQNQQTSS CCCCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ERELEMSTEIARLKRQLAERDEELAILQKAATYFAKRLK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2987844; 9278503