Definition | Shigella flexneri 2a str. 2457T, complete genome. |
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Accession | NC_004741 |
Length | 4,599,354 |
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The map label for this gene is insA [H]
Identifier: 30064020
GI number: 30064020
Start: 2750774
End: 2751073
Strand: Direct
Name: insA [H]
Synonym: S2860
Alternate gene names: 30064020
Gene position: 2750774-2751073 (Clockwise)
Preceding gene: 30064019
Following gene: 30064021
Centisome position: 59.81
GC content: 53.0
Gene sequence:
>300_bases GTGGCTTCCATTTCCATCAGATGTCCTTCCTGCTCCGCTACTGAAGGCGTGGTGCGTAACGGCAAAAGCACTGCCGGACA TCAGCGCTATCTCTGCTCTCATTGCCGTAAAACATGGCAACTACAGTTCACTTACACCGCCTCTCAGCCCGGTACGCACC AGAAAATCATTGATATGGCCATGAATGGCGTCGGATATCGCGCCAGTGCACGCATTATGGGCGTTGGCCTCAACACGGTT TTACGTCACTTAAAAAACTCAGGCCGCAGTGGTAACCTCGCGCATACAACCAGGCAGTGA
Upstream 100 bases:
>100_bases TTTAGTAGTAATATTAGGATTGGTGATTCTGCACTCCAGAAGTTCGGTAATGCTGCCAACTTACTAATTTAGTGTATGAT GGTGATTTTAAGGTGCTTGC
Downstream 100 bases:
>100_bases TGTGATTGTCTGCGCTGAAATGGACGAACATTGGGGCTACGTCGGTGCTAAATCACGTCAGCGCTGGCTGTTTTACGCGT ATGACAGGATACGGAGGACG
Product: IS1 orfA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 99; Mature: 98
Protein sequence:
>99_residues MASISIRCPSCSATEGVVRNGKSTAGHQRYLCSHCRKTWQLQFTYTASQPGTHQKIIDMAMNGVGYRASARIMGVGLNTV LRHLKNSGRSGNLAHTTRQ
Sequences:
>Translated_99_residues MASISIRCPSCSATEGVVRNGKSTAGHQRYLCSHCRKTWQLQFTYTASQPGTHQKIIDMAMNGVGYRASARIMGVGLNTV LRHLKNSGRSGNLAHTTRQ >Mature_98_residues ASISIRCPSCSATEGVVRNGKSTAGHQRYLCSHCRKTWQLQFTYTASQPGTHQKIIDMAMNGVGYRASARIMGVGLNTVL RHLKNSGRSGNLAHTTRQ
Specific function: Absolutely required for transposition of IS1 [H]
COG id: COG3677
COG function: function code L; Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the IS1 elements insA family [H]
Homologues:
Organism=Escherichia coli, GI1790747, Length=90, Percent_Identity=96.6666666666667, Blast_Score=179, Evalue=3e-47, Organism=Escherichia coli, GI1789852, Length=90, Percent_Identity=93.3333333333333, Blast_Score=178, Evalue=5e-47, Organism=Escherichia coli, GI1788204, Length=90, Percent_Identity=93.3333333333333, Blast_Score=178, Evalue=5e-47, Organism=Escherichia coli, GI1786204, Length=90, Percent_Identity=93.3333333333333, Blast_Score=178, Evalue=5e-47, Organism=Escherichia coli, GI87081814, Length=90, Percent_Identity=92.2222222222222, Blast_Score=177, Evalue=1e-46, Organism=Escherichia coli, GI1786471, Length=90, Percent_Identity=92.2222222222222, Blast_Score=177, Evalue=1e-46, Organism=Escherichia coli, GI1786460, Length=90, Percent_Identity=92.2222222222222, Blast_Score=177, Evalue=1e-46,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012287 - InterPro: IPR003220 [H]
Pfam domain/function: PF03811 Ins_element1 [H]
EC number: NA
Molecular weight: Translated: 10821; Mature: 10689
Theoretical pI: Translated: 11.18; Mature: 11.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.0 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 8.1 %Cys+Met (Translated Protein) 4.1 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 7.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASISIRCPSCSATEGVVRNGKSTAGHQRYLCSHCRKTWQLQFTYTASQPGTHQKIIDMA CCEEEEECCCCCCCCHHHHCCCCCCHHHHHHHHHCCCCEEEEEEEECCCCCCHHHHHHHH MNGVGYRASARIMGVGLNTVLRHLKNSGRSGNLAHTTRQ HCCCCCCCCCEEEEECHHHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure ASISIRCPSCSATEGVVRNGKSTAGHQRYLCSHCRKTWQLQFTYTASQPGTHQKIIDMA CEEEEECCCCCCCCHHHHCCCCCCHHHHHHHHHCCCCEEEEEEEECCCCCCHHHHHHHH MNGVGYRASARIMGVGLNTVLRHLKNSGRSGNLAHTTRQ HCCCCCCCCCEEEEECHHHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 6265806 [H]