Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

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The map label for this gene is 29349735

Identifier: 29349735

GI number: 29349735

Start: 5699823

End: 5701370

Strand: Reverse

Name: 29349735

Synonym: BT_4327

Alternate gene names: NA

Gene position: 5701370-5699823 (Counterclockwise)

Preceding gene: 29349736

Following gene: 29349734

Centisome position: 91.07

GC content: 45.09

Gene sequence:

>1548_bases
ATGGCAAAGAAAATGATCTCACGGCTCTCGGTACTGGCAGTACTGATTGTGTTTCTGGCAGCATGTTCCAAACAAACGGA
ATATACGAACGTAATACCGGCAGACGCTACGGCTGTTGCCTCTATTGATTTGAAATCACTGGCCAACAAAGCCGGAATGA
ACGACAAAGAAAATGAAGCTGCTAAACAGAAACTGCTGGAAGCAATGAAAAGCGGGATGAATGCTGCCACTTTCCAACAG
TTGGAGAAGGTGATCAACAATCCGGGAGCATCCGGTCTGGATCCGGAAGCACCGATCTATATCTTTAGCTCTCCCCAAAT
TTCCGGTGGTGCATTCGTTGCCAAAGTCAGCAATGAAGACGATTTGCACGCTTCCCTCGATGTGATGGCAAAAGAACAAA
TCTGCCAGCCGGTCAGCGAAGCGGACGGATATAGCTTCACTACCCTGAACGGAAACTTGCTTGCTTTCAATGAAACCACT
GCAATCATTATCTCTGCCAGCAGAACTTCTCAGACAGAAGCAGCCAAAGAAGCCATCACCAAACTAATGAAACAGACTGC
CGACAACAGCATTGCGAAATCCGGAGCCTTCCAGAAAATAGCCAAGCAAAAGAGTGATATCAACTTCTTCGCCTCCATGT
CAGCAATCCCTTCTACTTACAGAAGCCAGATCAGCATGGGACTTCCTTCTGAAATCAAACCGGAAGACATTACCATCCTA
GGCGGACTGAACTTCGAAAAAGGCAAGATCGCCCTTAAAACAGAAAACTACACGGAGAACGACGCCGTCAAAGCGCTTCT
GAAAAAACAAATGGAATCATTTGGAAAGACAAACGGCACATTCGTGAAATACTTTCCGGCATCTACGCTGATGTTCATCA
ATATGGGCGTAAAAGGAGACGGACTTTACAATCTGTTGAGTGAGAATAAAGAATTCCGCAGCACTGTGTCTATCGCCAAA
GCGGATGAAGTAAAAGAACTGTTCAGTTCATTCAACGGCGATATCTCTGCCGGGCTGATCAATGTAACCATGAACAGTGC
CCCTACTTTTCTTGCTTATGCTGATGTAAAGAATGGGAATGCTCTTGAAGCTCTTTACAAGAACAAGCAGTCACTGGGCA
TGAGAAAAGGAGAAGACATCATGGAACTGGGCAAAGACGAGTATGTCTACAAAACAAGAGGCATGAATATATTTTTCGGC
ATCAAGGACAAACAGATGTATGCTACCAATGACGAACTGCTCTACAAGAGCATTGGCAAAACGGTTGACAAATCGATCAA
AGACGCTCCTTACGCAGCAGACATGAAAGGCAAGACCGTATTTATGGCCATCAATGCAGAAGCCATACTGGATTTACCGG
TCGTAAAGATGCTGGTAGGCTTCGGAGGCAAGGAGTTCAAGACTTATTCTGATCTCGCTTCCAAAGTTTCTTATTTATCC
GTTAGTTCGGAAGGAGAAACAAGCGAAACAGACCTTTGCCTGAAAGACAAAGATGTCAATGCCCTCAAACAAATCGTAGA
TTTTGCCAAGCAATTCGCCGGCATGTAA

Upstream 100 bases:

>100_bases
CAGCTTGGGTAAATCACGGCTTCGGACAGAGACAGCGGCACTCGTGGCTTGCCACACAATGAACTTATTGAACCAATAAT
AACTTTTAAATAGTATGAGT

Downstream 100 bases:

>100_bases
TTCGTCAATGAACGGCATGAATAGTATTCACTTACAGCAAACACTTCCCCAAGTGTTTGCTGACCGTAATTCGGTGACCT
CTGATGTATGGCATCAGGAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 515; Mature: 514

Protein sequence:

>515_residues
MAKKMISRLSVLAVLIVFLAACSKQTEYTNVIPADATAVASIDLKSLANKAGMNDKENEAAKQKLLEAMKSGMNAATFQQ
LEKVINNPGASGLDPEAPIYIFSSPQISGGAFVAKVSNEDDLHASLDVMAKEQICQPVSEADGYSFTTLNGNLLAFNETT
AIIISASRTSQTEAAKEAITKLMKQTADNSIAKSGAFQKIAKQKSDINFFASMSAIPSTYRSQISMGLPSEIKPEDITIL
GGLNFEKGKIALKTENYTENDAVKALLKKQMESFGKTNGTFVKYFPASTLMFINMGVKGDGLYNLLSENKEFRSTVSIAK
ADEVKELFSSFNGDISAGLINVTMNSAPTFLAYADVKNGNALEALYKNKQSLGMRKGEDIMELGKDEYVYKTRGMNIFFG
IKDKQMYATNDELLYKSIGKTVDKSIKDAPYAADMKGKTVFMAINAEAILDLPVVKMLVGFGGKEFKTYSDLASKVSYLS
VSSEGETSETDLCLKDKDVNALKQIVDFAKQFAGM

Sequences:

>Translated_515_residues
MAKKMISRLSVLAVLIVFLAACSKQTEYTNVIPADATAVASIDLKSLANKAGMNDKENEAAKQKLLEAMKSGMNAATFQQ
LEKVINNPGASGLDPEAPIYIFSSPQISGGAFVAKVSNEDDLHASLDVMAKEQICQPVSEADGYSFTTLNGNLLAFNETT
AIIISASRTSQTEAAKEAITKLMKQTADNSIAKSGAFQKIAKQKSDINFFASMSAIPSTYRSQISMGLPSEIKPEDITIL
GGLNFEKGKIALKTENYTENDAVKALLKKQMESFGKTNGTFVKYFPASTLMFINMGVKGDGLYNLLSENKEFRSTVSIAK
ADEVKELFSSFNGDISAGLINVTMNSAPTFLAYADVKNGNALEALYKNKQSLGMRKGEDIMELGKDEYVYKTRGMNIFFG
IKDKQMYATNDELLYKSIGKTVDKSIKDAPYAADMKGKTVFMAINAEAILDLPVVKMLVGFGGKEFKTYSDLASKVSYLS
VSSEGETSETDLCLKDKDVNALKQIVDFAKQFAGM
>Mature_514_residues
AKKMISRLSVLAVLIVFLAACSKQTEYTNVIPADATAVASIDLKSLANKAGMNDKENEAAKQKLLEAMKSGMNAATFQQL
EKVINNPGASGLDPEAPIYIFSSPQISGGAFVAKVSNEDDLHASLDVMAKEQICQPVSEADGYSFTTLNGNLLAFNETTA
IIISASRTSQTEAAKEAITKLMKQTADNSIAKSGAFQKIAKQKSDINFFASMSAIPSTYRSQISMGLPSEIKPEDITILG
GLNFEKGKIALKTENYTENDAVKALLKKQMESFGKTNGTFVKYFPASTLMFINMGVKGDGLYNLLSENKEFRSTVSIAKA
DEVKELFSSFNGDISAGLINVTMNSAPTFLAYADVKNGNALEALYKNKQSLGMRKGEDIMELGKDEYVYKTRGMNIFFGI
KDKQMYATNDELLYKSIGKTVDKSIKDAPYAADMKGKTVFMAINAEAILDLPVVKMLVGFGGKEFKTYSDLASKVSYLSV
SSEGETSETDLCLKDKDVNALKQIVDFAKQFAGM

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 55877; Mature: 55745

Theoretical pI: Translated: 6.23; Mature: 6.23

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKKMISRLSVLAVLIVFLAACSKQTEYTNVIPADATAVASIDLKSLANKAGMNDKENEA
CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHEEHHHHHHHHHHCCCCCCHHHH
AKQKLLEAMKSGMNAATFQQLEKVINNPGASGLDPEAPIYIFSSPQISGGAFVAKVSNED
HHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCEEEEEECCCC
DLHASLDVMAKEQICQPVSEADGYSFTTLNGNLLAFNETTAIIISASRTSQTEAAKEAIT
CHHHHHHHHHHHHHHCCHHHCCCCEEEEECCCEEEECCCEEEEEEECCCCHHHHHHHHHH
KLMKQTADNSIAKSGAFQKIAKQKSDINFFASMSAIPSTYRSQISMGLPSEIKPEDITIL
HHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEE
GGLNFEKGKIALKTENYTENDAVKALLKKQMESFGKTNGTFVKYFPASTLMFINMGVKGD
ECCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCEEEEEECCCCCC
GLYNLLSENKEFRSTVSIAKADEVKELFSSFNGDISAGLINVTMNSAPTFLAYADVKNGN
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCEECEEEEEEECCCCCEEEEEECCCCC
ALEALYKNKQSLGMRKGEDIMELGKDEYVYKTRGMNIFFGIKDKQMYATNDELLYKSIGK
HHHHHHHCHHHCCCCCCCHHHHCCCCCEEEEECCCEEEEEECCCEEEECCHHHHHHHHHH
TVDKSIKDAPYAADMKGKTVFMAINAEAILDLPVVKMLVGFGGKEFKTYSDLASKVSYLS
HHHHHHHCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHEEE
VSSEGETSETDLCLKDKDVNALKQIVDFAKQFAGM
ECCCCCCCCCCEEECCCCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
AKKMISRLSVLAVLIVFLAACSKQTEYTNVIPADATAVASIDLKSLANKAGMNDKENEA
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHEEHHHHHHHHHHCCCCCCHHHH
AKQKLLEAMKSGMNAATFQQLEKVINNPGASGLDPEAPIYIFSSPQISGGAFVAKVSNED
HHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCEEEEEECCCC
DLHASLDVMAKEQICQPVSEADGYSFTTLNGNLLAFNETTAIIISASRTSQTEAAKEAIT
CHHHHHHHHHHHHHHCCHHHCCCCEEEEECCCEEEECCCEEEEEEECCCCHHHHHHHHHH
KLMKQTADNSIAKSGAFQKIAKQKSDINFFASMSAIPSTYRSQISMGLPSEIKPEDITIL
HHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEE
GGLNFEKGKIALKTENYTENDAVKALLKKQMESFGKTNGTFVKYFPASTLMFINMGVKGD
ECCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCEEEEEECCCCCC
GLYNLLSENKEFRSTVSIAKADEVKELFSSFNGDISAGLINVTMNSAPTFLAYADVKNGN
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCEECEEEEEEECCCCCEEEEEECCCCC
ALEALYKNKQSLGMRKGEDIMELGKDEYVYKTRGMNIFFGIKDKQMYATNDELLYKSIGK
HHHHHHHCHHHCCCCCCCHHHHCCCCCEEEEECCCEEEEEECCCEEEECCHHHHHHHHHH
TVDKSIKDAPYAADMKGKTVFMAINAEAILDLPVVKMLVGFGGKEFKTYSDLASKVSYLS
HHHHHHHCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHEEE
VSSEGETSETDLCLKDKDVNALKQIVDFAKQFAGM
ECCCCCCCCCCEEECCCCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA