Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

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The map label for this gene is 29349681

Identifier: 29349681

GI number: 29349681

Start: 5631593

End: 5633152

Strand: Reverse

Name: 29349681

Synonym: BT_4273

Alternate gene names: NA

Gene position: 5633152-5631593 (Counterclockwise)

Preceding gene: 29349682

Following gene: 29349671

Centisome position: 89.98

GC content: 32.82

Gene sequence:

>1560_bases
ATGATACCAGAACAGATAAATGGAGATAGCTGCCAAGTATCTATAAAAAGTAAAACAAGAGAGATAACTAATGCATGGCT
TACAGTTACAGCTCTCAACAGTAATGAAGTGGCAGTAGCATCTGAAGACAAAAAGCTGGAACATCCGGAATGGACGGATA
ATGTACTATCATTAAAATTGACGGACGGGAAATATAAAGCCAAAGCATTACGAATTAATATCTTTTATTTTGGAAATAGT
AATCCGGATCAACAAATATGTTTAAGTGACCTGCAAATCAATATTGATGGAAAAGATCTGGGGAAACAATCTATTGAAGA
TCAAACTGTCATTAACACAAACATTCACAAAAGACTTATCAAAAATAAGATTATAAAATTATCTCATGACAATGATAGTA
CTCTGCTTACGCGAATAAATGAATTGAAAGATAAAAAAATCATAGGATTAGGAGAATGTACTCATGGTTCGCAAGAATTA
AAAACTGCGGTTATTCAATTTTCAAAGAATCTCATTCAAAATGGAGATTGCAGGTTTGTTCTGTTAGAGGCTCCCGTTGA
TGCCTTACTACTGGTCGATGCATATATACAAGGAATTATATCATCACCCGACATTGAAAAACAAATAAAAGAAATCATGC
AGATGTTTTTTACAAACAATAGCGAGCTTATGGGCTTTGTGGATTGGTTAAAGGAGTATAACAAGACATCTCTTCGTAAA
GTACACCTATCTGGTATGGATTATAAAGACATCATAAGTCCATATTTTTATGACTACCTATTAAATCTATTGGATAAAGA
AAAAGGGCGATACTATTTATTAAAACTATATGATAAAGAATTTAAAGATATATTGCAATATGCTCATGAGGATGTTTATT
TAAAAACGAAGTTGGGAGAAGAGAATTTTTCGCTTTTTACCCAATACATAGAAACTTGTATCAATTTGGGTATTGGCTCC
CAATTGCCTCCTCCTGATTATAGGGATTTCTATATGTTTACTTATACCAAACAACTTGCTGATCATTTCTTAAAAAAAGA
TGAGAAGCTAATCATTCACGCTCATAGTGCCCATCTTTCTAACTTGGAACGTTTTGATAGTTTTCCGTATAAAGAAATCC
CAGCAGGGAATCGTTTAAAGAAATATTATGGAGATAAGTATTACTCAATTGGTTTTCAAGTTGGAAAAGGAACATTTACT
CAGGAATCCGCCGGTTATTTTAGCAAGCTGATAGCATTACCATTATCCAAGCCACCATATAATAGTTTTGAACATTTAGC
TCTAAGCACAAAAGAAAGTTATTTCTATTATCCATCCAAATATATGGATGACGGTATTGTTGAGTTATTAGTTATTCCAA
GAATGGCACGTTATCAGAGACAATATCAATTTCATTCTGTGAAAAACTGGTGTGATGCCTATGTCTTTATACAAGAGAGC
ACGCCGCTCAAAAATGTAACGACTGGAGAATTCGAAACAATGTTCAAACAATTTCTTAGAATAAAGGAGTTGATAAAAGA
ATTGAAAGCAAACGAAGAAAAGATAAGAAATAAAGAGTAA

Upstream 100 bases:

>100_bases
AATGCAAATAAAGAAAGATGATAATATAGTTTATAAAATATCATATACTCCACCTCCATCAAAAAATAAGAATATGATAT
TTATTACATCTTGCACTATC

Downstream 100 bases:

>100_bases
CTTCTACTCAAAAGTAAAAGCTACTCTTCATTCCATATAAGATTGGGGATATTCAGTAAGTTTCCCTATTTATTTGCTTT
AATACGTTGCCCGTCCGCCT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 519; Mature: 519

Protein sequence:

>519_residues
MIPEQINGDSCQVSIKSKTREITNAWLTVTALNSNEVAVASEDKKLEHPEWTDNVLSLKLTDGKYKAKALRINIFYFGNS
NPDQQICLSDLQINIDGKDLGKQSIEDQTVINTNIHKRLIKNKIIKLSHDNDSTLLTRINELKDKKIIGLGECTHGSQEL
KTAVIQFSKNLIQNGDCRFVLLEAPVDALLLVDAYIQGIISSPDIEKQIKEIMQMFFTNNSELMGFVDWLKEYNKTSLRK
VHLSGMDYKDIISPYFYDYLLNLLDKEKGRYYLLKLYDKEFKDILQYAHEDVYLKTKLGEENFSLFTQYIETCINLGIGS
QLPPPDYRDFYMFTYTKQLADHFLKKDEKLIIHAHSAHLSNLERFDSFPYKEIPAGNRLKKYYGDKYYSIGFQVGKGTFT
QESAGYFSKLIALPLSKPPYNSFEHLALSTKESYFYYPSKYMDDGIVELLVIPRMARYQRQYQFHSVKNWCDAYVFIQES
TPLKNVTTGEFETMFKQFLRIKELIKELKANEEKIRNKE

Sequences:

>Translated_519_residues
MIPEQINGDSCQVSIKSKTREITNAWLTVTALNSNEVAVASEDKKLEHPEWTDNVLSLKLTDGKYKAKALRINIFYFGNS
NPDQQICLSDLQINIDGKDLGKQSIEDQTVINTNIHKRLIKNKIIKLSHDNDSTLLTRINELKDKKIIGLGECTHGSQEL
KTAVIQFSKNLIQNGDCRFVLLEAPVDALLLVDAYIQGIISSPDIEKQIKEIMQMFFTNNSELMGFVDWLKEYNKTSLRK
VHLSGMDYKDIISPYFYDYLLNLLDKEKGRYYLLKLYDKEFKDILQYAHEDVYLKTKLGEENFSLFTQYIETCINLGIGS
QLPPPDYRDFYMFTYTKQLADHFLKKDEKLIIHAHSAHLSNLERFDSFPYKEIPAGNRLKKYYGDKYYSIGFQVGKGTFT
QESAGYFSKLIALPLSKPPYNSFEHLALSTKESYFYYPSKYMDDGIVELLVIPRMARYQRQYQFHSVKNWCDAYVFIQES
TPLKNVTTGEFETMFKQFLRIKELIKELKANEEKIRNKE
>Mature_519_residues
MIPEQINGDSCQVSIKSKTREITNAWLTVTALNSNEVAVASEDKKLEHPEWTDNVLSLKLTDGKYKAKALRINIFYFGNS
NPDQQICLSDLQINIDGKDLGKQSIEDQTVINTNIHKRLIKNKIIKLSHDNDSTLLTRINELKDKKIIGLGECTHGSQEL
KTAVIQFSKNLIQNGDCRFVLLEAPVDALLLVDAYIQGIISSPDIEKQIKEIMQMFFTNNSELMGFVDWLKEYNKTSLRK
VHLSGMDYKDIISPYFYDYLLNLLDKEKGRYYLLKLYDKEFKDILQYAHEDVYLKTKLGEENFSLFTQYIETCINLGIGS
QLPPPDYRDFYMFTYTKQLADHFLKKDEKLIIHAHSAHLSNLERFDSFPYKEIPAGNRLKKYYGDKYYSIGFQVGKGTFT
QESAGYFSKLIALPLSKPPYNSFEHLALSTKESYFYYPSKYMDDGIVELLVIPRMARYQRQYQFHSVKNWCDAYVFIQES
TPLKNVTTGEFETMFKQFLRIKELIKELKANEEKIRNKE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 60362; Mature: 60362

Theoretical pI: Translated: 7.35; Mature: 7.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIPEQINGDSCQVSIKSKTREITNAWLTVTALNSNEVAVASEDKKLEHPEWTDNVLSLKL
CCCCCCCCCCEEEEEHHHHHHHCCEEEEEEEECCCCEEEECCCCCCCCCCCCCCEEEEEE
TDGKYKAKALRINIFYFGNSNPDQQICLSDLQINIDGKDLGKQSIEDQTVINTNIHKRLI
ECCCEEEEEEEEEEEEECCCCCCHHHEEECCEEEECCHHCCCCCCCCCEEECHHHHHHHH
KNKIIKLSHDNDSTLLTRINELKDKKIIGLGECTHGSQELKTAVIQFSKNLIQNGDCRFV
HCCCEEEECCCCCHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHHCCCCEEEE
LLEAPVDALLLVDAYIQGIISSPDIEKQIKEIMQMFFTNNSELMGFVDWLKEYNKTSLRK
EEECCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEE
VHLSGMDYKDIISPYFYDYLLNLLDKEKGRYYLLKLYDKEFKDILQYAHEDVYLKTKLGE
EEECCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHCCCEEEEEECCC
ENFSLFTQYIETCINLGIGSQLPPPDYRDFYMFTYTKQLADHFLKKDEKLIIHAHSAHLS
CHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEHHHHHHHHHHHCCCCEEEEEECCHHHH
NLERFDSFPYKEIPAGNRLKKYYGDKYYSIGFQVGKGTFTQESAGYFSKLIALPLSKPPY
HHHHHCCCCCCCCCCCCHHHHHHCCEEEEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCC
NSFEHLALSTKESYFYYPSKYMDDGIVELLVIPRMARYQRQYQFHSVKNWCDAYVFIQES
CCHHHHEEECCCCEEECCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECC
TPLKNVTTGEFETMFKQFLRIKELIKELKANEEKIRNKE
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHCCCC
>Mature Secondary Structure
MIPEQINGDSCQVSIKSKTREITNAWLTVTALNSNEVAVASEDKKLEHPEWTDNVLSLKL
CCCCCCCCCCEEEEEHHHHHHHCCEEEEEEEECCCCEEEECCCCCCCCCCCCCCEEEEEE
TDGKYKAKALRINIFYFGNSNPDQQICLSDLQINIDGKDLGKQSIEDQTVINTNIHKRLI
ECCCEEEEEEEEEEEEECCCCCCHHHEEECCEEEECCHHCCCCCCCCCEEECHHHHHHHH
KNKIIKLSHDNDSTLLTRINELKDKKIIGLGECTHGSQELKTAVIQFSKNLIQNGDCRFV
HCCCEEEECCCCCHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHHCCCCEEEE
LLEAPVDALLLVDAYIQGIISSPDIEKQIKEIMQMFFTNNSELMGFVDWLKEYNKTSLRK
EEECCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEE
VHLSGMDYKDIISPYFYDYLLNLLDKEKGRYYLLKLYDKEFKDILQYAHEDVYLKTKLGE
EEECCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHCCCEEEEEECCC
ENFSLFTQYIETCINLGIGSQLPPPDYRDFYMFTYTKQLADHFLKKDEKLIIHAHSAHLS
CHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEHHHHHHHHHHHCCCCEEEEEECCHHHH
NLERFDSFPYKEIPAGNRLKKYYGDKYYSIGFQVGKGTFTQESAGYFSKLIALPLSKPPY
HHHHHCCCCCCCCCCCCHHHHHHCCEEEEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCC
NSFEHLALSTKESYFYYPSKYMDDGIVELLVIPRMARYQRQYQFHSVKNWCDAYVFIQES
CCHHHHEEECCCCEEECCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECC
TPLKNVTTGEFETMFKQFLRIKELIKELKANEEKIRNKE
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA