Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

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The map label for this gene is 29349682

Identifier: 29349682

GI number: 29349682

Start: 5633762

End: 5634553

Strand: Reverse

Name: 29349682

Synonym: BT_4274

Alternate gene names: NA

Gene position: 5634553-5633762 (Counterclockwise)

Preceding gene: 29349683

Following gene: 29349681

Centisome position: 90.0

GC content: 31.44

Gene sequence:

>792_bases
ATGAGAATACTACAAACAATAATCTTATCATCATTATTACTTTTGATAGCATCGAATGCTTATCCTCAAAAAGATAAAAG
TCTTCAAAATGTTTTTATCCCAGAAGGTTATGCACTAGATAGAAATCAAGTACAGTATAATCAGCCTAAAGATTTTATAT
CCTATATCGATTCTTTAGGAAAAAACAAAGTTTATTTAGGATGCTTTCTTGCAAAAGAATCTAAGAGATTACCAAGCTAC
TATCGCAAATCCTTTCTATCCAAAGATAGTAATTTTATTATACTCACTGCTATTCCCAGTATATTTTGCAGACGCAATGA
TTCAGTCTATGCAGATTTTGATTTGCTTCCAGAAATGAAAGTTGAGATGAATACTTATCATTTAACCCATATTAAAGCGG
ACTTCCTTAAAAATACGGGAAAACGAGTCGCTTTTTTATCTGAATTACCTATAACTTATAAGTCTTCCAAATATGCCCGT
GAATCCTTCAATGCAGATACTGTTATCACATACCCTTTAAAAATGTGGGAAAAATATGAAAATAAATATACTCATTGCTT
GGTCATATTAATTCAAAAACGATATCGTGGTTGTATCCCTCTTTATTGCTTATACACTGACGAAGGAGCTAAGAAACTCA
ACCACTATATCAAATCATTACAAAAGGTGTTTTGGTATAGAAATCCGAAAGATTATATCGAAGTAATAGATCCTGTCCCA
GAGACAGATAATATATTTATTTTGCCAAAGCGAAATGAATCAGATACCGTACGTATAGTTGGTCAATTATGA

Upstream 100 bases:

>100_bases
TAAGATGGGAATTTATCCTATTACTTCTATCTTTACAGAATCACACAACTAAAATTTATCAGAATGATTATAATGGCTAC
AATTATTAAAGTGTAAAACA

Downstream 100 bases:

>100_bases
AAAATAGAATTATATCACTTTTCATATATTTATTGCCTGGTTTGATCTATGCTCAAAATAATGCAGACGACAAATATGAG
ATTATGTCTCTAACCGACAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 263; Mature: 263

Protein sequence:

>263_residues
MRILQTIILSSLLLLIASNAYPQKDKSLQNVFIPEGYALDRNQVQYNQPKDFISYIDSLGKNKVYLGCFLAKESKRLPSY
YRKSFLSKDSNFIILTAIPSIFCRRNDSVYADFDLLPEMKVEMNTYHLTHIKADFLKNTGKRVAFLSELPITYKSSKYAR
ESFNADTVITYPLKMWEKYENKYTHCLVILIQKRYRGCIPLYCLYTDEGAKKLNHYIKSLQKVFWYRNPKDYIEVIDPVP
ETDNIFILPKRNESDTVRIVGQL

Sequences:

>Translated_263_residues
MRILQTIILSSLLLLIASNAYPQKDKSLQNVFIPEGYALDRNQVQYNQPKDFISYIDSLGKNKVYLGCFLAKESKRLPSY
YRKSFLSKDSNFIILTAIPSIFCRRNDSVYADFDLLPEMKVEMNTYHLTHIKADFLKNTGKRVAFLSELPITYKSSKYAR
ESFNADTVITYPLKMWEKYENKYTHCLVILIQKRYRGCIPLYCLYTDEGAKKLNHYIKSLQKVFWYRNPKDYIEVIDPVP
ETDNIFILPKRNESDTVRIVGQL
>Mature_263_residues
MRILQTIILSSLLLLIASNAYPQKDKSLQNVFIPEGYALDRNQVQYNQPKDFISYIDSLGKNKVYLGCFLAKESKRLPSY
YRKSFLSKDSNFIILTAIPSIFCRRNDSVYADFDLLPEMKVEMNTYHLTHIKADFLKNTGKRVAFLSELPITYKSSKYAR
ESFNADTVITYPLKMWEKYENKYTHCLVILIQKRYRGCIPLYCLYTDEGAKKLNHYIKSLQKVFWYRNPKDYIEVIDPVP
ETDNIFILPKRNESDTVRIVGQL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30869; Mature: 30869

Theoretical pI: Translated: 9.53; Mature: 9.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRILQTIILSSLLLLIASNAYPQKDKSLQNVFIPEGYALDRNQVQYNQPKDFISYIDSLG
CHHHHHHHHHHHHHHHHCCCCCCCCCCHHEEECCCCCCCCCCCCCCCCCHHHHHHHHHCC
KNKVYLGCFLAKESKRLPSYYRKSFLSKDSNFIILTAIPSIFCRRNDSVYADFDLLPEMK
CCEEEEEEEEECCCCCCHHHHHHHHHCCCCCEEEEEECCHHHHCCCCCEEECCCCCCCCE
VEMNTYHLTHIKADFLKNTGKRVAFLSELPITYKSSKYARESFNADTVITYPLKMWEKYE
EEECEEEEEHHHHHHHHCCCCEEEEEECCCCEECCCHHHHHHCCCCEEEEEHHHHHHHHH
NKYTHCLVILIQKRYRGCIPLYCLYTDEGAKKLNHYIKSLQKVFWYRNPKDYIEVIDPVP
CCHHHHHHHEEHHHHCCCEEEEEEEECCHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCC
ETDNIFILPKRNESDTVRIVGQL
CCCCEEEEECCCCCCEEEEEECC
>Mature Secondary Structure
MRILQTIILSSLLLLIASNAYPQKDKSLQNVFIPEGYALDRNQVQYNQPKDFISYIDSLG
CHHHHHHHHHHHHHHHHCCCCCCCCCCHHEEECCCCCCCCCCCCCCCCCHHHHHHHHHCC
KNKVYLGCFLAKESKRLPSYYRKSFLSKDSNFIILTAIPSIFCRRNDSVYADFDLLPEMK
CCEEEEEEEEECCCCCCHHHHHHHHHCCCCCEEEEEECCHHHHCCCCCEEECCCCCCCCE
VEMNTYHLTHIKADFLKNTGKRVAFLSELPITYKSSKYARESFNADTVITYPLKMWEKYE
EEECEEEEEHHHHHHHHCCCCEEEEEECCCCEECCCHHHHHHCCCCEEEEEHHHHHHHHH
NKYTHCLVILIQKRYRGCIPLYCLYTDEGAKKLNHYIKSLQKVFWYRNPKDYIEVIDPVP
CCHHHHHHHEEHHHHCCCEEEEEEEECCHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCC
ETDNIFILPKRNESDTVRIVGQL
CCCCEEEEECCCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA