Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

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The map label for this gene is 29349454

Identifier: 29349454

GI number: 29349454

Start: 5263331

End: 5264887

Strand: Reverse

Name: 29349454

Synonym: BT_4046

Alternate gene names: NA

Gene position: 5264887-5263331 (Counterclockwise)

Preceding gene: 29349459

Following gene: 29349451

Centisome position: 84.1

GC content: 38.92

Gene sequence:

>1557_bases
ATGGACGAGAGACTCAGACGATACCCGATAGGAATACAGAATTTCGAAGATTTGCGAAATAATGGTTATGTGTACGTTGA
TAAAACGGAGTTAATTTACCGTTTGACAAACACAAATAAGGTTTATTTTTTAAGCCGTCCCCGACGATTCGGGAAAAGTC
TGCTAGTATCTACACTCGAAGCTTATTTTTCCGGAAAGAAAGACTTGTTCAACGGATTGGCAATGGAAACTCTGGAAAAA
GAATGGGCTGTTTATCCGGTGCTACATATTGATTTCAGTGTGAGTAAATATATGACTGCCGAAGCGTTATCAGCCGTCAT
TAATTACCAGTTACTGCAATGGGAAAAATTATATGGACGCGAAGAAGGAGAAACGACTTTCAGCCTTCGTTTAAAGGGAA
TCATACAACGCGCATATACACAGACCGGCAAACCAGTTGTGATACTTGTAGATGAATATGATGCTCCCATGCTGGACAGT
AATAACAATACGGAATTGCAAATAGAAATTCGTGATATTATGCGCGATTTCTTCAGCCCTTTGAAAGCGCAAGGCCAATA
TATCCGTTTCCTTTTTATCACAGGTATCAGCAAATTCAGTCAAATGAGTATCTTTAGCGAACTGAACAACTTGCAAAATA
TCAGTATGTGGGATGAATATAGCGCTATATGCGGCATTACCGAACAAGAGGTACACACACTGCAAATCGATATCGAACAG
ATGGCTCAAGCCAATAACGAAACATATGAAGAAGCTTGTACTCATCTGAAACAACAATATGACGGATATCATTTTAGTGA
AAATAGCGAGGATATTTATAATCCATTCAGTCTGTTCAATGCTTTCGCACAAAAAAAGTATTCCAATTTTTGGTTTTCTA
CCGGTACTCCCACTTTTTTGATAGATCTCCTACAAGAAAGTAACTTTGATATCCGTGAGTTGGATGACACTACTGCTACA
GCAGAACAATTTGATGCTCCCACTAATAGAATTACCGACCCTCTTCCAGTACTTTATCAAAGCGGCTATCTCACTATTAA
AGGATATGACCCGAGTTTTCAGCTCTATACCCTAGCTTACCCCAACAAGGAAGTCAGGAAAGGATTTCTCGAATCTCTCA
TGCCTGCTTATGTACATTTGCCCGCACGAGAGAATACATTTTATATAGTATCATTTATTAAAGACTTACGTGCCGGAAAT
TTGGATGGATGCCTGGAAAGACTAAAGTCCTTCTTCGCTTCTATCCCTAATAAGTTAAATAATAAAGAAGAGAAACATTA
CCAAACCATCTTCTATCTATTTTTCAGGCTGATGGGGCAATATATAGATGTGGAAGTAGATACAGCTATCGGAAGGGCTG
ACGCCATTGTAAAATTACAAGATACCCTTTATGTCTTTGAATTTAAAGTGGACGGTACACCGGAAGAAGCATTGGCGCAG
ATTAATAGTAAGGAGTATGCCATTCCCTATCAGGTGGGAGACTGGAAAATAATAAAAGTGGGGGTAAACTTTGATAGTGC
GACAAGAACTATCGGAACATGGAAAACAGAAAGATAA

Upstream 100 bases:

>100_bases
AAAATAAAAATGGAAGAAAACAACAATATACTTTTTGATCTTTGATTTTCCCCTATTTAGTTCTATCTTTGTCTATGTTT
CATATAAAAATGTAATTTAG

Downstream 100 bases:

>100_bases
AGAACGCGGATTAACCACTATACAGCCTAAATGACAGAATAAAAAGTGGGGATAACGTTTTCAATAACGCATCCCCACTC
AAGCTTAGTTAATGTACTGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 518; Mature: 518

Protein sequence:

>518_residues
MDERLRRYPIGIQNFEDLRNNGYVYVDKTELIYRLTNTNKVYFLSRPRRFGKSLLVSTLEAYFSGKKDLFNGLAMETLEK
EWAVYPVLHIDFSVSKYMTAEALSAVINYQLLQWEKLYGREEGETTFSLRLKGIIQRAYTQTGKPVVILVDEYDAPMLDS
NNNTELQIEIRDIMRDFFSPLKAQGQYIRFLFITGISKFSQMSIFSELNNLQNISMWDEYSAICGITEQEVHTLQIDIEQ
MAQANNETYEEACTHLKQQYDGYHFSENSEDIYNPFSLFNAFAQKKYSNFWFSTGTPTFLIDLLQESNFDIRELDDTTAT
AEQFDAPTNRITDPLPVLYQSGYLTIKGYDPSFQLYTLAYPNKEVRKGFLESLMPAYVHLPARENTFYIVSFIKDLRAGN
LDGCLERLKSFFASIPNKLNNKEEKHYQTIFYLFFRLMGQYIDVEVDTAIGRADAIVKLQDTLYVFEFKVDGTPEEALAQ
INSKEYAIPYQVGDWKIIKVGVNFDSATRTIGTWKTER

Sequences:

>Translated_518_residues
MDERLRRYPIGIQNFEDLRNNGYVYVDKTELIYRLTNTNKVYFLSRPRRFGKSLLVSTLEAYFSGKKDLFNGLAMETLEK
EWAVYPVLHIDFSVSKYMTAEALSAVINYQLLQWEKLYGREEGETTFSLRLKGIIQRAYTQTGKPVVILVDEYDAPMLDS
NNNTELQIEIRDIMRDFFSPLKAQGQYIRFLFITGISKFSQMSIFSELNNLQNISMWDEYSAICGITEQEVHTLQIDIEQ
MAQANNETYEEACTHLKQQYDGYHFSENSEDIYNPFSLFNAFAQKKYSNFWFSTGTPTFLIDLLQESNFDIRELDDTTAT
AEQFDAPTNRITDPLPVLYQSGYLTIKGYDPSFQLYTLAYPNKEVRKGFLESLMPAYVHLPARENTFYIVSFIKDLRAGN
LDGCLERLKSFFASIPNKLNNKEEKHYQTIFYLFFRLMGQYIDVEVDTAIGRADAIVKLQDTLYVFEFKVDGTPEEALAQ
INSKEYAIPYQVGDWKIIKVGVNFDSATRTIGTWKTER
>Mature_518_residues
MDERLRRYPIGIQNFEDLRNNGYVYVDKTELIYRLTNTNKVYFLSRPRRFGKSLLVSTLEAYFSGKKDLFNGLAMETLEK
EWAVYPVLHIDFSVSKYMTAEALSAVINYQLLQWEKLYGREEGETTFSLRLKGIIQRAYTQTGKPVVILVDEYDAPMLDS
NNNTELQIEIRDIMRDFFSPLKAQGQYIRFLFITGISKFSQMSIFSELNNLQNISMWDEYSAICGITEQEVHTLQIDIEQ
MAQANNETYEEACTHLKQQYDGYHFSENSEDIYNPFSLFNAFAQKKYSNFWFSTGTPTFLIDLLQESNFDIRELDDTTAT
AEQFDAPTNRITDPLPVLYQSGYLTIKGYDPSFQLYTLAYPNKEVRKGFLESLMPAYVHLPARENTFYIVSFIKDLRAGN
LDGCLERLKSFFASIPNKLNNKEEKHYQTIFYLFFRLMGQYIDVEVDTAIGRADAIVKLQDTLYVFEFKVDGTPEEALAQ
INSKEYAIPYQVGDWKIIKVGVNFDSATRTIGTWKTER

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018631
- InterPro:   IPR012547 [H]

Pfam domain/function: PF09820 AAA-ATPase_like; PF08011 DUF1703 [H]

EC number: NA

Molecular weight: Translated: 60211; Mature: 60211

Theoretical pI: Translated: 4.75; Mature: 4.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDERLRRYPIGIQNFEDLRNNGYVYVDKTELIYRLTNTNKVYFLSRPRRFGKSLLVSTLE
CCCCHHHCCCCCCCHHHHCCCCEEEEECCEEEEEEECCCEEEEECCCHHHHHHHHHHHHH
AYFSGKKDLFNGLAMETLEKEWAVYPVLHIDFSVSKYMTAEALSAVINYQLLQWEKLYGR
HHHCCCHHHHHHHHHHHHHHCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCC
EEGETTFSLRLKGIIQRAYTQTGKPVVILVDEYDAPMLDSNNNTELQIEIRDIMRDFFSP
CCCCEEEEEHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCEEEEEHHHHHHHHHHH
LKAQGQYIRFLFITGISKFSQMSIFSELNNLQNISMWDEYSAICGITEQEVHTLQIDIEQ
HHCCCCEEEEEEEECHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCHHCEEEEEEEHHH
MAQANNETYEEACTHLKQQYDGYHFSENSEDIYNPFSLFNAFAQKKYSNFWFSTGTPTFL
HHCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHCCHHHHHHHHHHHHHCCCEEECCCHHHH
IDLLQESNFDIRELDDTTATAEQFDAPTNRITDPLPVLYQSGYLTIKGYDPSFQLYTLAY
HHHHHHCCCCCEECCCCHHHHHHCCCCHHHCCCCCHHHCCCCEEEEEECCCCEEEEEEEC
PNKEVRKGFLESLMPAYVHLPARENTFYIVSFIKDLRAGNLDGCLERLKSFFASIPNKLN
CCHHHHHHHHHHHHHHHEECCCCCCCEEHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHCC
NKEEKHYQTIFYLFFRLMGQYIDVEVDTAIGRADAIVKLQDTLYVFEFKVDGTPEEALAQ
CCHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCEEEEEECEEEEEEEEECCCHHHHHHH
INSKEYAIPYQVGDWKIIKVGVNFDSATRTIGTWKTER
CCCCCEEEEEEECCEEEEEEEECCCCCCCEECCCCCCC
>Mature Secondary Structure
MDERLRRYPIGIQNFEDLRNNGYVYVDKTELIYRLTNTNKVYFLSRPRRFGKSLLVSTLE
CCCCHHHCCCCCCCHHHHCCCCEEEEECCEEEEEEECCCEEEEECCCHHHHHHHHHHHHH
AYFSGKKDLFNGLAMETLEKEWAVYPVLHIDFSVSKYMTAEALSAVINYQLLQWEKLYGR
HHHCCCHHHHHHHHHHHHHHCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCC
EEGETTFSLRLKGIIQRAYTQTGKPVVILVDEYDAPMLDSNNNTELQIEIRDIMRDFFSP
CCCCEEEEEHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCEEEEEHHHHHHHHHHH
LKAQGQYIRFLFITGISKFSQMSIFSELNNLQNISMWDEYSAICGITEQEVHTLQIDIEQ
HHCCCCEEEEEEEECHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCHHCEEEEEEEHHH
MAQANNETYEEACTHLKQQYDGYHFSENSEDIYNPFSLFNAFAQKKYSNFWFSTGTPTFL
HHCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHCCHHHHHHHHHHHHHCCCEEECCCHHHH
IDLLQESNFDIRELDDTTATAEQFDAPTNRITDPLPVLYQSGYLTIKGYDPSFQLYTLAY
HHHHHHCCCCCEECCCCHHHHHHCCCCHHHCCCCCHHHCCCCEEEEEECCCCEEEEEEEC
PNKEVRKGFLESLMPAYVHLPARENTFYIVSFIKDLRAGNLDGCLERLKSFFASIPNKLN
CCHHHHHHHHHHHHHHHEECCCCCCCEEHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHCC
NKEEKHYQTIFYLFFRLMGQYIDVEVDTAIGRADAIVKLQDTLYVFEFKVDGTPEEALAQ
CCHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCEEEEEECEEEEEEEEECCCHHHHHHH
INSKEYAIPYQVGDWKIIKVGVNFDSATRTIGTWKTER
CCCCCEEEEEEECCEEEEEEEECCCCCCCEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 2388847 [H]