Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

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The map label for this gene is 29349459

Identifier: 29349459

GI number: 29349459

Start: 5278177

End: 5279094

Strand: Reverse

Name: 29349459

Synonym: BT_4051

Alternate gene names: NA

Gene position: 5279094-5278177 (Counterclockwise)

Preceding gene: 29349466

Following gene: 29349454

Centisome position: 84.33

GC content: 45.97

Gene sequence:

>918_bases
ATGGGCAATAACAAGAATCTGCACGGACATCTGTTTGCACTCACGGCAAACGTTATGTGGGGACTGATGTCTCCTATCGG
CAAATCGGCACTTCAAGAGTTTTCAGCTATCTCCGTCACCACGTTTCGTATGGTAGGTGCGGCAGCGGCATTCTGGATAC
TTTCCATCTTCTGCAAACAGGAGCATGTGGACCACCGCGATATGCTGAAGATTTTCTTTGCTTCCCTCTTTGCTCTGGTT
TTCAATCAGGGGATATTTATCTTCGGGCTTTCGATGACTTCGCCTATTGATGCTTCTATCGTAACGACTACTCTGCCGAT
AGTTACCATGATTGTGGCAGCCATCTATCTGAAAGAGCCGATTACGAACAAGAAAGTACTGGGTATTTTCGTGGGAGCTA
TGGGAGCGCTTATCCTTATTATGAGCAGTCAGGCAGCGAGTAGTGGTAACGGAAGTCTGATCGGCGACTTGCTTTGTCTG
GTTGCGCAAATCAGTTTCTCCATCTATCTGACGGTGTTCAAGGGGCTGTCTCAGCGATATTCGGCAGTAACCATCAATAA
ATGGATGTTTATCTATGCTTCGATGTGTTATATTCCTTTCTCTTATCAAGATATTTCGGTCATTCAATGGACCAGCATTC
CAATGGTTGCCATTTTGCAGGTATTGTATGTCGTACTGGGAGGAAGTTTCCTTGCTTATCTCTGCATCATGACAGCTCAG
AAGTTACTCCGCCCTACAGTGGTAAGTATGTATAACTATATGCAGCCGATTGTGGCTACGATTGCAGCAATCCTCATGGG
AATCGGGAGCTTCGGCTGGGAAAAAGGAATCGCCATTACACTTGTGTTTCTGGGTGTGTATATTGTGACGCAGAGTAAGT
CTAAGGCGGATTTTGAGAAGGCGGGAAAGGAGTTGTAG

Upstream 100 bases:

>100_bases
CAATTTTAATCAAGGCAAATATAAACAAATCATGTGACAAATTGGTTACCTTTGCAGCAGTTTTCAATAAAGGTAACAAT
TAAAAGGTATACACAGACTT

Downstream 100 bases:

>100_bases
AAGTTTCCTCATACCGATAAAATAGAGAAAAGCATCAATGGGGATGTGTCGAAACCCTCATAAATTTAGAAGGGGGGACA
CATTCCCATTGATACTTTTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 305; Mature: 304

Protein sequence:

>305_residues
MGNNKNLHGHLFALTANVMWGLMSPIGKSALQEFSAISVTTFRMVGAAAAFWILSIFCKQEHVDHRDMLKIFFASLFALV
FNQGIFIFGLSMTSPIDASIVTTTLPIVTMIVAAIYLKEPITNKKVLGIFVGAMGALILIMSSQAASSGNGSLIGDLLCL
VAQISFSIYLTVFKGLSQRYSAVTINKWMFIYASMCYIPFSYQDISVIQWTSIPMVAILQVLYVVLGGSFLAYLCIMTAQ
KLLRPTVVSMYNYMQPIVATIAAILMGIGSFGWEKGIAITLVFLGVYIVTQSKSKADFEKAGKEL

Sequences:

>Translated_305_residues
MGNNKNLHGHLFALTANVMWGLMSPIGKSALQEFSAISVTTFRMVGAAAAFWILSIFCKQEHVDHRDMLKIFFASLFALV
FNQGIFIFGLSMTSPIDASIVTTTLPIVTMIVAAIYLKEPITNKKVLGIFVGAMGALILIMSSQAASSGNGSLIGDLLCL
VAQISFSIYLTVFKGLSQRYSAVTINKWMFIYASMCYIPFSYQDISVIQWTSIPMVAILQVLYVVLGGSFLAYLCIMTAQ
KLLRPTVVSMYNYMQPIVATIAAILMGIGSFGWEKGIAITLVFLGVYIVTQSKSKADFEKAGKEL
>Mature_304_residues
GNNKNLHGHLFALTANVMWGLMSPIGKSALQEFSAISVTTFRMVGAAAAFWILSIFCKQEHVDHRDMLKIFFASLFALVF
NQGIFIFGLSMTSPIDASIVTTTLPIVTMIVAAIYLKEPITNKKVLGIFVGAMGALILIMSSQAASSGNGSLIGDLLCLV
AQISFSIYLTVFKGLSQRYSAVTINKWMFIYASMCYIPFSYQDISVIQWTSIPMVAILQVLYVVLGGSFLAYLCIMTAQK
LLRPTVVSMYNYMQPIVATIAAILMGIGSFGWEKGIAITLVFLGVYIVTQSKSKADFEKAGKEL

Specific function: Unknown

COG id: COG0697

COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33336; Mature: 33205

Theoretical pI: Translated: 9.43; Mature: 9.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
5.2 %Met     (Translated Protein)
6.6 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGNNKNLHGHLFALTANVMWGLMSPIGKSALQEFSAISVTTFRMVGAAAAFWILSIFCKQ
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EHVDHRDMLKIFFASLFALVFNQGIFIFGLSMTSPIDASIVTTTLPIVTMIVAAIYLKEP
HCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCC
ITNKKVLGIFVGAMGALILIMSSQAASSGNGSLIGDLLCLVAQISFSIYLTVFKGLSQRY
CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SAVTINKWMFIYASMCYIPFSYQDISVIQWTSIPMVAILQVLYVVLGGSFLAYLCIMTAQ
HHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
KLLRPTVVSMYNYMQPIVATIAAILMGIGSFGWEKGIAITLVFLGVYIVTQSKSKADFEK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHH
AGKEL
CCCCC
>Mature Secondary Structure 
GNNKNLHGHLFALTANVMWGLMSPIGKSALQEFSAISVTTFRMVGAAAAFWILSIFCKQ
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH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CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA