Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

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The map label for this gene is 29346658

Identifier: 29346658

GI number: 29346658

Start: 1554128

End: 1555723

Strand: Reverse

Name: 29346658

Synonym: BT_1248

Alternate gene names: NA

Gene position: 1555723-1554128 (Counterclockwise)

Preceding gene: 29346659

Following gene: 29346657

Centisome position: 24.85

GC content: 42.29

Gene sequence:

>1596_bases
ATGAAAGAGTTGGGAGTACCCGTTCGTTCCTGGGTGCCCGATTGGTTGGGGTTCTGTTGCATTTTCATTGTTATTCTTCC
GGTTACCATGCTGAATGGTTCGTATACCGGAAGCATGCTCGAAGTATCGAATACGCTTGGAACCAATTCGGAAGATATAA
CGATGGGATATTATGCGGCTTCGGCAGGCATGGCCATTGCTTATCCTATTATTCCTAAAGTGCTGGCAGCCGTTTCGGTC
AAGTTTCTCTTGCTGATAGACTTGCTCCTGCAGTTCTTTTTGAGTTGGATTTGCGCCCGTTCGCAGAATGCCGATATTCT
GATTGCCTGCAGTTTTGCTATCGGCTTTCTGAAAGGTTTTCTGATGTTATGGTTTATTCGTTATGCACAGAAGATTTTCA
GTGCGAAGAATATCCGCAGCGAGTTCTATTCTTATTTTTATCCATTAGTGTACGGGGGCGGACAGGCTTCCATGTTGGTC
ACTGCGCAATTGGCATATCACTATAACTGGAAGTATATGTATTACTTCATGATGCTTTTGATTCTGGTTTCTGTTCTGTT
TGTTATCATCTGTTTCCGGCATAACCGCCCGATTAAATCGGTGCCGTTATCCGATTTGCATATTCGGGAGATGTTTATCA
TTTCGGTAGGGCTGCTGATGCTGATTTACGTCATCAATTATGGGAAAGTTCTGGATTGGATGGCTTCTGCCAAACTTTGT
GCTTATATTGTAATTTCTCCTATACTGATCGCATTATTTATCTGGATTCAGCACCATTCGAAGAATCCCTATGTAAGTCT
TGCCCCTCTGTTTCAGCCTAAAGCAATCATCGGATATTTCTATATGATGCTTGTTATGTTTTTCAGTACATCCACCACAT
TATTGACCAATTACCTGAGCATCATCCTGAAAGTAGACAGCACGCATACCTATTCTCTTTATATCTTTTTGCTCCCGGGG
TATGTAATCGGAGCTTTTATCTGTTTCTGGTGGTTTCGTTGGCAGCGTTGGCGTTTCCGGTTTCTGATAGCGGGCGGAAT
GAGTTGTTTTGTTATTTTCTTTGGTGTTCTTTATTTTGGCATTGCGCCGAACAGTACGTATGAAATGTTATATCTGCCCA
TCTTTTTTCGCGGATTGGGTATGTTGACTTTGATTATAGCCTTTGCCTTGTTTGCCGTAGAAGATTTGAACCCGAAGTTT
TTGTTGTCGAATGCTTTCTTTCTGATAATCTTCCGTTCGGTACTGGCACCTATCATGGCTACTTCTTTTTACAGCAATAT
GCTGTATCGTCTGCAACAGAAATATATATATTCTTTGTCGGAGACTATCACGACTGCCGACCCGCTGGCTGCGTCCCGTT
ATACTCAATCTCTGAATAATGCGCTTGCACAAGGACATAGATATGATGAAGCGGTACAGATAGCTACCCATTCTCTTTAT
GGAACTTTGCAGGAGCAGAGTCTGTTGCTTGCACTGAAAGAAATATTAGGTTATCTGTTGGTGATATCGGTCATAATAGC
TGTTATCTCGCGTTTCATTCCGTTTCATAAGACGATTCGTGTTACATTTGCCAAGACGGGAGATGATATGGTATAG

Upstream 100 bases:

>100_bases
TCCCGGTACGGATAGAACTGGAGAATATCTCTTCAGAAGAAATGGCACAATTAAGAGCGGGTATGATGGTTGAAACAGAA
GCTTTGCGCAAATGATAACA

Downstream 100 bases:

>100_bases
CATATAAAAATGAGTAAATCATCCCAATTTTTCAATTCTTTTTCCTATATTTGGCTGGTAATCACTGGAGAACAGATTCT
CTCCGGAGTAGGACAGATCT

Product: putative transport protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 531; Mature: 531

Protein sequence:

>531_residues
MKELGVPVRSWVPDWLGFCCIFIVILPVTMLNGSYTGSMLEVSNTLGTNSEDITMGYYAASAGMAIAYPIIPKVLAAVSV
KFLLLIDLLLQFFLSWICARSQNADILIACSFAIGFLKGFLMLWFIRYAQKIFSAKNIRSEFYSYFYPLVYGGGQASMLV
TAQLAYHYNWKYMYYFMMLLILVSVLFVIICFRHNRPIKSVPLSDLHIREMFIISVGLLMLIYVINYGKVLDWMASAKLC
AYIVISPILIALFIWIQHHSKNPYVSLAPLFQPKAIIGYFYMMLVMFFSTSTTLLTNYLSIILKVDSTHTYSLYIFLLPG
YVIGAFICFWWFRWQRWRFRFLIAGGMSCFVIFFGVLYFGIAPNSTYEMLYLPIFFRGLGMLTLIIAFALFAVEDLNPKF
LLSNAFFLIIFRSVLAPIMATSFYSNMLYRLQQKYIYSLSETITTADPLAASRYTQSLNNALAQGHRYDEAVQIATHSLY
GTLQEQSLLLALKEILGYLLVISVIIAVISRFIPFHKTIRVTFAKTGDDMV

Sequences:

>Translated_531_residues
MKELGVPVRSWVPDWLGFCCIFIVILPVTMLNGSYTGSMLEVSNTLGTNSEDITMGYYAASAGMAIAYPIIPKVLAAVSV
KFLLLIDLLLQFFLSWICARSQNADILIACSFAIGFLKGFLMLWFIRYAQKIFSAKNIRSEFYSYFYPLVYGGGQASMLV
TAQLAYHYNWKYMYYFMMLLILVSVLFVIICFRHNRPIKSVPLSDLHIREMFIISVGLLMLIYVINYGKVLDWMASAKLC
AYIVISPILIALFIWIQHHSKNPYVSLAPLFQPKAIIGYFYMMLVMFFSTSTTLLTNYLSIILKVDSTHTYSLYIFLLPG
YVIGAFICFWWFRWQRWRFRFLIAGGMSCFVIFFGVLYFGIAPNSTYEMLYLPIFFRGLGMLTLIIAFALFAVEDLNPKF
LLSNAFFLIIFRSVLAPIMATSFYSNMLYRLQQKYIYSLSETITTADPLAASRYTQSLNNALAQGHRYDEAVQIATHSLY
GTLQEQSLLLALKEILGYLLVISVIIAVISRFIPFHKTIRVTFAKTGDDMV
>Mature_531_residues
MKELGVPVRSWVPDWLGFCCIFIVILPVTMLNGSYTGSMLEVSNTLGTNSEDITMGYYAASAGMAIAYPIIPKVLAAVSV
KFLLLIDLLLQFFLSWICARSQNADILIACSFAIGFLKGFLMLWFIRYAQKIFSAKNIRSEFYSYFYPLVYGGGQASMLV
TAQLAYHYNWKYMYYFMMLLILVSVLFVIICFRHNRPIKSVPLSDLHIREMFIISVGLLMLIYVINYGKVLDWMASAKLC
AYIVISPILIALFIWIQHHSKNPYVSLAPLFQPKAIIGYFYMMLVMFFSTSTTLLTNYLSIILKVDSTHTYSLYIFLLPG
YVIGAFICFWWFRWQRWRFRFLIAGGMSCFVIFFGVLYFGIAPNSTYEMLYLPIFFRGLGMLTLIIAFALFAVEDLNPKF
LLSNAFFLIIFRSVLAPIMATSFYSNMLYRLQQKYIYSLSETITTADPLAASRYTQSLNNALAQGHRYDEAVQIATHSLY
GTLQEQSLLLALKEILGYLLVISVIIAVISRFIPFHKTIRVTFAKTGDDMV

Specific function: Unknown

COG id: COG0477

COG function: function code GEPR; Permeases of the major facilitator superfamily

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 60772; Mature: 60772

Theoretical pI: Translated: 9.29; Mature: 9.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKELGVPVRSWVPDWLGFCCIFIVILPVTMLNGSYTGSMLEVSNTLGTNSEDITMGYYAA
CCCCCCCHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCCHHEEHHHCCCCCCCEEEEEEEH
SAGMAIAYPIIPKVLAAVSVKFLLLIDLLLQFFLSWICARSQNADILIACSFAIGFLKGF
HCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHH
LMLWFIRYAQKIFSAKNIRSEFYSYFYPLVYGGGQASMLVTAQLAYHYNWKYMYYFMMLL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHEEEEHHHHCCHHHHHHHHHHH
ILVSVLFVIICFRHNRPIKSVPLSDLHIREMFIISVGLLMLIYVINYGKVLDWMASAKLC
HHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AYIVISPILIALFIWIQHHSKNPYVSLAPLFQPKAIIGYFYMMLVMFFSTSTTLLTNYLS
HHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHH
IILKVDSTHTYSLYIFLLPGYVIGAFICFWWFRWQRWRFRFLIAGGMSCFVIFFGVLYFG
HHEEECCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCHHHHHHHHHHHHHC
IAPNSTYEMLYLPIFFRGLGMLTLIIAFALFAVEDLNPKFLLSNAFFLIIFRSVLAPIMA
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
TSFYSNMLYRLQQKYIYSLSETITTADPLAASRYTQSLNNALAQGHRYDEAVQIATHSLY
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
GTLQEQSLLLALKEILGYLLVISVIIAVISRFIPFHKTIRVTFAKTGDDMV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCC
>Mature Secondary Structure
MKELGVPVRSWVPDWLGFCCIFIVILPVTMLNGSYTGSMLEVSNTLGTNSEDITMGYYAA
CCCCCCCHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCCHHEEHHHCCCCCCCEEEEEEEH
SAGMAIAYPIIPKVLAAVSVKFLLLIDLLLQFFLSWICARSQNADILIACSFAIGFLKGF
HCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHH
LMLWFIRYAQKIFSAKNIRSEFYSYFYPLVYGGGQASMLVTAQLAYHYNWKYMYYFMMLL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHEEEEHHHHCCHHHHHHHHHHH
ILVSVLFVIICFRHNRPIKSVPLSDLHIREMFIISVGLLMLIYVINYGKVLDWMASAKLC
HHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AYIVISPILIALFIWIQHHSKNPYVSLAPLFQPKAIIGYFYMMLVMFFSTSTTLLTNYLS
HHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHH
IILKVDSTHTYSLYIFLLPGYVIGAFICFWWFRWQRWRFRFLIAGGMSCFVIFFGVLYFG
HHEEECCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCHHHHHHHHHHHHHC
IAPNSTYEMLYLPIFFRGLGMLTLIIAFALFAVEDLNPKFLLSNAFFLIIFRSVLAPIMA
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
TSFYSNMLYRLQQKYIYSLSETITTADPLAASRYTQSLNNALAQGHRYDEAVQIATHSLY
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
GTLQEQSLLLALKEILGYLLVISVIIAVISRFIPFHKTIRVTFAKTGDDMV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA