Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
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Accession | NC_004663 |
Length | 6,260,361 |
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The map label for this gene is 29346657
Identifier: 29346657
GI number: 29346657
Start: 1551404
End: 1553995
Strand: Reverse
Name: 29346657
Synonym: BT_1247
Alternate gene names: NA
Gene position: 1553995-1551404 (Counterclockwise)
Preceding gene: 29346658
Following gene: 29346656
Centisome position: 24.82
GC content: 44.48
Gene sequence:
>2592_bases ATGATGAACAGGGCTATCCTCGTCTTACTATTCCTCTTGTCGGCACTGCCATTTTCTTTGCAAGCCCAGATGCCGGACAG TATCGTTCGTAAATTATCGGGCTATATTGAAGCAGTGCAGAATTTTGGAGAAATGCTGCCACAGGAAAAAGTCTATTTAC ATTTCGACAATACCAGTTATTATCAGGGAGACCCTGTTTGGTTTCAGTGTTATGTTGTGACATCTGAACTGAACCGCCCG TCGGATTTGAGTAAAACCCTTTATGTCGAATTGTTGAATCCGGGTGGGGAAGTCATAGCGAAACGTGTATTGCCTGTTAG GAACGGCCGTTGCCACGGTAGTTTCGAATTAACACAATTACCTTTTTATTCCGGTTTTTATGAGGTTCGTGCTTACACGA AATATATGTTGAACTTTGGAGAGGAGGTTATTTTCTCCCGGGTTCTTCCGGTATTTGATAAGCCACGGGCAGCTGGTGAT TTTAAAGAAAAGAACATACAGAGATATGCTGTTTATAAATATCCGCAGGTACGGAAAAAAACGGCTAAGGAGAAAAAAGT CAATCTGAAGTTTTTTCCTGAAGGAGGAAATTTGGTCGAAGGCATTCCTTCCCGCGTTGCTTTTGAGGCAACGGATGCCT ATGGAAATCCGATCGCACTGTCCGGAACGGTTATCAACCGGGAAAAGAAAGAAATCGCCTCCTTTGCCACTGTACACGAA GGACGTGGCACCTTTGTGTATACTCCTACGAACGGAGAGAATCATAAGGCTGAGGTGGAGTTGAATGGCAAAAAGTACCG TTTTGATTTGCCGGAAGCCCGGTTGCAGGGATATGTCTTGCAAGTTGATAATCTTTCTTCGGAAGACAGTATAGCAGTCA GTGTACAAAAGAATCCGCATACACCGGAGTCTGTCTTAGGCTTAGCTGTGCTTGGTCATGGGAAACTGCTTAATTATTGT CTGTTGAACATCCGGAAAAATACACCTGTCTCTTTCAAACTTGACAAGACGGAATGGAAGGCAGGGGTGGCACAGATCGT ATTGTTTGATACAGCAGGACAGATTATTGCCGACCGCCTTATCTTTATGAGAAAACCGGAGCCATTGACAATCAGTGTCC GGAAAAACAAAGAGGATTATCAGCCGTTTGATCGTGTCTTATTGGACTTTTCAGTACGTGACACGGCGGGTAAGCCTGTG TCCGCTCCGATATCAGTATCTGTGCGTGACGGATGGGAAGAAGTGGAAAGCCGGCATTCTATGTTAGCGGACTTATTGTT AATGTCTGAGATTAAAGGCTACGTTCATCGTCCGCTCTATTATTTCGAAGCGGATGATAAAGAGCACAGAACAGCTTTGG ATCACTTGTTGTTGGTGCAGGGATGGCGGCGTTATGCATGGAAATACGAGTCGGGGGTGGAACCGTTTGAATTGAAGTAC ATGCCCGAACAAGGGATTGAAGTGCATGGACAAGTTGTTTCATTTGTTAGAGGTAAGCCTAAACCAAATATACAAGTCTC TTCTTTTCTGGCGAAGCGGGGAGATGAGGAAACTTCGCCGGGAGCGCTTTCTCTTAACCTGTTTGAAACAGACAGTGTGG GACGTTTTGCTTTTATTACCGATATTATTGGCAAGTGGAATCTGATTCTTTCTGTGATGGAGAAAGGTAAGCGGAAAGAC CACCGGATTGTATTAGACAGAGTCTTCAGCCCTCAACCTACACAATATCCGCTGGGAGAAATGCAGATAAGCCTGTCCGG CAGAGATAAACCGGGAGCAGAACAGGAACTACAGACAGATACTGTGATTGGTGATGATATCGATTATAATCGTTTTATGG ATGCTTATGAAGATTCTCTGTCAAAACGGGGTATGAGAGAGAAAAATCACCGTTTGGGTGAAGTGGTGGTGAAGGCTAAG AAATGGAGTCGTGAGAAGGATATTTATGAAAATCGTTCGAAGTCGGTTGCTTACTACGATGTACCTTCGGAGATGGATGA TATTTTGGATAAGGGAGGTTATATCGGTGAAGATATCCACGAGCTACTTGTCCGTATGAATCCCAATTTCATACGCAGGT ATAGTGGTGGTGAGGAATGGTTGCAGTACAAAGGTCGCTCTCCCTTGTATGTGATAAACTATAAACGAACGGAGGCTACT GAAATAGATCAGACCCGATACCGGACACTTCGCCTGGTGGCTATCAAGTCTATTTATATCAACGAGGAGTTATCGGCAAG ATGTCGTTATGCTGACATCCGTATGTCTCCGATGGATGTAGATGAAATATATGGTTGTGCTGTTTTTATTGAAACCTATC CGGAAGGAGAGATTCCCGTAAAAGGAGGCAGGGGAGTCAGAAAAACTTGGTTGGATGGCTATAGCGAACCTGTAGAGTTT TATCATCCCGATTATTCTGTTCTTCCCAAAGAAGAGGACTATCGCCGCACATTATACTGGAACCCGGAAGTGATGCCGGA TGAAGCAGGGAATGCTCAGGTGAGGTTCTATAACAACAGTCGTTGCCGCAGGTTAAAAATAACGGCTGAAATGATTTCTG CGGATGGGGCTATTGGCATGTTTAACGAGTGA
Upstream 100 bases:
>100_bases CAATTCTTTTTCCTATATTTGGCTGGTAATCACTGGAGAACAGATTCTCTCCGGAGTAGGACAGATCTAATCTTAAACAC GAATTTGAAATAGATGAATT
Downstream 100 bases:
>100_bases TATAAAAAAAGAGGGTGTTTTGATACATTTACATTTGCAGTATTAAATATCACAACAAAATATAAGTGTATATTTGAAAA GTAGAGTTGCAGTGAACTAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 863; Mature: 863
Protein sequence:
>863_residues MMNRAILVLLFLLSALPFSLQAQMPDSIVRKLSGYIEAVQNFGEMLPQEKVYLHFDNTSYYQGDPVWFQCYVVTSELNRP SDLSKTLYVELLNPGGEVIAKRVLPVRNGRCHGSFELTQLPFYSGFYEVRAYTKYMLNFGEEVIFSRVLPVFDKPRAAGD FKEKNIQRYAVYKYPQVRKKTAKEKKVNLKFFPEGGNLVEGIPSRVAFEATDAYGNPIALSGTVINREKKEIASFATVHE GRGTFVYTPTNGENHKAEVELNGKKYRFDLPEARLQGYVLQVDNLSSEDSIAVSVQKNPHTPESVLGLAVLGHGKLLNYC LLNIRKNTPVSFKLDKTEWKAGVAQIVLFDTAGQIIADRLIFMRKPEPLTISVRKNKEDYQPFDRVLLDFSVRDTAGKPV SAPISVSVRDGWEEVESRHSMLADLLLMSEIKGYVHRPLYYFEADDKEHRTALDHLLLVQGWRRYAWKYESGVEPFELKY MPEQGIEVHGQVVSFVRGKPKPNIQVSSFLAKRGDEETSPGALSLNLFETDSVGRFAFITDIIGKWNLILSVMEKGKRKD HRIVLDRVFSPQPTQYPLGEMQISLSGRDKPGAEQELQTDTVIGDDIDYNRFMDAYEDSLSKRGMREKNHRLGEVVVKAK KWSREKDIYENRSKSVAYYDVPSEMDDILDKGGYIGEDIHELLVRMNPNFIRRYSGGEEWLQYKGRSPLYVINYKRTEAT EIDQTRYRTLRLVAIKSIYINEELSARCRYADIRMSPMDVDEIYGCAVFIETYPEGEIPVKGGRGVRKTWLDGYSEPVEF YHPDYSVLPKEEDYRRTLYWNPEVMPDEAGNAQVRFYNNSRCRRLKITAEMISADGAIGMFNE
Sequences:
>Translated_863_residues MMNRAILVLLFLLSALPFSLQAQMPDSIVRKLSGYIEAVQNFGEMLPQEKVYLHFDNTSYYQGDPVWFQCYVVTSELNRP SDLSKTLYVELLNPGGEVIAKRVLPVRNGRCHGSFELTQLPFYSGFYEVRAYTKYMLNFGEEVIFSRVLPVFDKPRAAGD FKEKNIQRYAVYKYPQVRKKTAKEKKVNLKFFPEGGNLVEGIPSRVAFEATDAYGNPIALSGTVINREKKEIASFATVHE GRGTFVYTPTNGENHKAEVELNGKKYRFDLPEARLQGYVLQVDNLSSEDSIAVSVQKNPHTPESVLGLAVLGHGKLLNYC LLNIRKNTPVSFKLDKTEWKAGVAQIVLFDTAGQIIADRLIFMRKPEPLTISVRKNKEDYQPFDRVLLDFSVRDTAGKPV SAPISVSVRDGWEEVESRHSMLADLLLMSEIKGYVHRPLYYFEADDKEHRTALDHLLLVQGWRRYAWKYESGVEPFELKY MPEQGIEVHGQVVSFVRGKPKPNIQVSSFLAKRGDEETSPGALSLNLFETDSVGRFAFITDIIGKWNLILSVMEKGKRKD HRIVLDRVFSPQPTQYPLGEMQISLSGRDKPGAEQELQTDTVIGDDIDYNRFMDAYEDSLSKRGMREKNHRLGEVVVKAK KWSREKDIYENRSKSVAYYDVPSEMDDILDKGGYIGEDIHELLVRMNPNFIRRYSGGEEWLQYKGRSPLYVINYKRTEAT EIDQTRYRTLRLVAIKSIYINEELSARCRYADIRMSPMDVDEIYGCAVFIETYPEGEIPVKGGRGVRKTWLDGYSEPVEF YHPDYSVLPKEEDYRRTLYWNPEVMPDEAGNAQVRFYNNSRCRRLKITAEMISADGAIGMFNE >Mature_863_residues MMNRAILVLLFLLSALPFSLQAQMPDSIVRKLSGYIEAVQNFGEMLPQEKVYLHFDNTSYYQGDPVWFQCYVVTSELNRP SDLSKTLYVELLNPGGEVIAKRVLPVRNGRCHGSFELTQLPFYSGFYEVRAYTKYMLNFGEEVIFSRVLPVFDKPRAAGD FKEKNIQRYAVYKYPQVRKKTAKEKKVNLKFFPEGGNLVEGIPSRVAFEATDAYGNPIALSGTVINREKKEIASFATVHE GRGTFVYTPTNGENHKAEVELNGKKYRFDLPEARLQGYVLQVDNLSSEDSIAVSVQKNPHTPESVLGLAVLGHGKLLNYC LLNIRKNTPVSFKLDKTEWKAGVAQIVLFDTAGQIIADRLIFMRKPEPLTISVRKNKEDYQPFDRVLLDFSVRDTAGKPV SAPISVSVRDGWEEVESRHSMLADLLLMSEIKGYVHRPLYYFEADDKEHRTALDHLLLVQGWRRYAWKYESGVEPFELKY MPEQGIEVHGQVVSFVRGKPKPNIQVSSFLAKRGDEETSPGALSLNLFETDSVGRFAFITDIIGKWNLILSVMEKGKRKD HRIVLDRVFSPQPTQYPLGEMQISLSGRDKPGAEQELQTDTVIGDDIDYNRFMDAYEDSLSKRGMREKNHRLGEVVVKAK KWSREKDIYENRSKSVAYYDVPSEMDDILDKGGYIGEDIHELLVRMNPNFIRRYSGGEEWLQYKGRSPLYVINYKRTEAT EIDQTRYRTLRLVAIKSIYINEELSARCRYADIRMSPMDVDEIYGCAVFIETYPEGEIPVKGGRGVRKTWLDGYSEPVEF YHPDYSVLPKEEDYRRTLYWNPEVMPDEAGNAQVRFYNNSRCRRLKITAEMISADGAIGMFNE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 98995; Mature: 98995
Theoretical pI: Translated: 7.07; Mature: 7.07
Prosite motif: PS00133 CARBOXYPEPT_ZN_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMNRAILVLLFLLSALPFSLQAQMPDSIVRKLSGYIEAVQNFGEMLPQEKVYLHFDNTSY CCCHHHHHHHHHHHHCCCEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCE YQGDPVWFQCYVVTSELNRPSDLSKTLYVELLNPGGEVIAKRVLPVRNGRCHGSFELTQL ECCCCEEEEEEEEEECCCCCCCCCCEEEEEEECCCHHHHHHHHCCCCCCCCCCCEEEEEC PFYSGFYEVRAYTKYMLNFGEEVIFSRVLPVFDKPRAAGDFKEKNIQRYAVYKYPQVRKK CCCCCHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCHHCCCEEEEEECCCHHHHH TAKEKKVNLKFFPEGGNLVEGIPSRVAFEATDAYGNPIALSGTVINREKKEIASFATVHE HHHHHEEEEEEECCCCCHHHCCCCCEEEEECCCCCCCEEEEEEEECCHHHHHHHHHHEEC GRGTFVYTPTNGENHKAEVELNGKKYRFDLPEARLQGYVLQVDNLSSEDSIAVSVQKNPH CCCCEEECCCCCCCCEEEEEECCCEEEECCCHHHHCEEEEEECCCCCCCCEEEEEECCCC TPESVLGLAVLGHGKLLNYCLLNIRKNTPVSFKLDKTEWKAGVAQIVLFDTAGQIIADRL CHHHHHHHHEECCCHHHHHHHHEEECCCCEEEEECHHHHHCCEEEEEEEECCCHHHHHHH IFMRKPEPLTISVRKNKEDYQPFDRVLLDFSVRDTAGKPVSAPISVSVRDGWEEVESRHS HEEECCCCEEEEEECCCCCCCHHHHHHEEEEECCCCCCCCCCCEEEEECCCHHHHHHHHH MLADLLLMSEIKGYVHRPLYYFEADDKEHRTALDHLLLVQGWRRYAWKYESGVEPFELKY HHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHEECCCCCCCEEEEE MPEQGIEVHGQVVSFVRGKPKPNIQVSSFLAKRGDEETSPGALSLNLFETDSVGRFAFIT CCCCCCCHHHHHHHHHCCCCCCCEEHHHHHHHCCCCCCCCCEEEEEEEECCCCCCHHHHH DIIGKWNLILSVMEKGKRKDHRIVLDRVFSPQPTQYPLGEMQISLSGRDKPGAEQELQTD HHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCEEEEECCCCCCCCHHHCCCC TVIGDDIDYNRFMDAYEDSLSKRGMREKNHRLGEVVVKAKKWSREKDIYENRSKSVAYYD CEECCCCCHHHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHCCCHHHHHHCCCCEEEEEE VPSEMDDILDKGGYIGEDIHELLVRMNPNFIRRYSGGEEWLQYKGRSPLYVINYKRTEAT CCHHHHHHHHCCCCCHHHHHHHHHHCCCCCEECCCCCHHHHHHCCCCCEEEEEECCCCCC EIDQTRYRTLRLVAIKSIYINEELSARCRYADIRMSPMDVDEIYGCAVFIETYPEGEIPV HHHHHHHHEEEEEEEEEEEECCCHHCCEEEEEEECCCCCHHHHCCEEEEEEECCCCCEEC KGGRGVRKTWLDGYSEPVEFYHPDYSVLPKEEDYRRTLYWNPEVMPDEAGNAQVRFYNNS CCCCCCHHHHHCCCCCCHHHCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCEEEEECCC RCRRLKITAEMISADGAIGMFNE CCEEEEEEHHHHCCCCCCCCCCC >Mature Secondary Structure MMNRAILVLLFLLSALPFSLQAQMPDSIVRKLSGYIEAVQNFGEMLPQEKVYLHFDNTSY CCCHHHHHHHHHHHHCCCEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCE YQGDPVWFQCYVVTSELNRPSDLSKTLYVELLNPGGEVIAKRVLPVRNGRCHGSFELTQL ECCCCEEEEEEEEEECCCCCCCCCCEEEEEEECCCHHHHHHHHCCCCCCCCCCCEEEEEC PFYSGFYEVRAYTKYMLNFGEEVIFSRVLPVFDKPRAAGDFKEKNIQRYAVYKYPQVRKK CCCCCHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCHHCCCEEEEEECCCHHHHH TAKEKKVNLKFFPEGGNLVEGIPSRVAFEATDAYGNPIALSGTVINREKKEIASFATVHE HHHHHEEEEEEECCCCCHHHCCCCCEEEEECCCCCCCEEEEEEEECCHHHHHHHHHHEEC GRGTFVYTPTNGENHKAEVELNGKKYRFDLPEARLQGYVLQVDNLSSEDSIAVSVQKNPH CCCCEEECCCCCCCCEEEEEECCCEEEECCCHHHHCEEEEEECCCCCCCCEEEEEECCCC TPESVLGLAVLGHGKLLNYCLLNIRKNTPVSFKLDKTEWKAGVAQIVLFDTAGQIIADRL CHHHHHHHHEECCCHHHHHHHHEEECCCCEEEEECHHHHHCCEEEEEEEECCCHHHHHHH IFMRKPEPLTISVRKNKEDYQPFDRVLLDFSVRDTAGKPVSAPISVSVRDGWEEVESRHS HEEECCCCEEEEEECCCCCCCHHHHHHEEEEECCCCCCCCCCCEEEEECCCHHHHHHHHH MLADLLLMSEIKGYVHRPLYYFEADDKEHRTALDHLLLVQGWRRYAWKYESGVEPFELKY HHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHEECCCCCCCEEEEE MPEQGIEVHGQVVSFVRGKPKPNIQVSSFLAKRGDEETSPGALSLNLFETDSVGRFAFIT CCCCCCCHHHHHHHHHCCCCCCCEEHHHHHHHCCCCCCCCCEEEEEEEECCCCCCHHHHH DIIGKWNLILSVMEKGKRKDHRIVLDRVFSPQPTQYPLGEMQISLSGRDKPGAEQELQTD HHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCEEEEECCCCCCCCHHHCCCC TVIGDDIDYNRFMDAYEDSLSKRGMREKNHRLGEVVVKAKKWSREKDIYENRSKSVAYYD CEECCCCCHHHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHCCCHHHHHHCCCCEEEEEE VPSEMDDILDKGGYIGEDIHELLVRMNPNFIRRYSGGEEWLQYKGRSPLYVINYKRTEAT CCHHHHHHHHCCCCCHHHHHHHHHHCCCCCEECCCCCHHHHHHCCCCCEEEEEECCCCCC EIDQTRYRTLRLVAIKSIYINEELSARCRYADIRMSPMDVDEIYGCAVFIETYPEGEIPV HHHHHHHHEEEEEEEEEEEECCCHHCCEEEEEEECCCCCHHHHCCEEEEEEECCCCCEEC KGGRGVRKTWLDGYSEPVEFYHPDYSVLPKEEDYRRTLYWNPEVMPDEAGNAQVRFYNNS CCCCCCHHHHHCCCCCCHHHCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCEEEEECCC RCRRLKITAEMISADGAIGMFNE CCEEEEEEHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA