Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

Click here to switch to the map view.

The map label for this gene is 29346657

Identifier: 29346657

GI number: 29346657

Start: 1551404

End: 1553995

Strand: Reverse

Name: 29346657

Synonym: BT_1247

Alternate gene names: NA

Gene position: 1553995-1551404 (Counterclockwise)

Preceding gene: 29346658

Following gene: 29346656

Centisome position: 24.82

GC content: 44.48

Gene sequence:

>2592_bases
ATGATGAACAGGGCTATCCTCGTCTTACTATTCCTCTTGTCGGCACTGCCATTTTCTTTGCAAGCCCAGATGCCGGACAG
TATCGTTCGTAAATTATCGGGCTATATTGAAGCAGTGCAGAATTTTGGAGAAATGCTGCCACAGGAAAAAGTCTATTTAC
ATTTCGACAATACCAGTTATTATCAGGGAGACCCTGTTTGGTTTCAGTGTTATGTTGTGACATCTGAACTGAACCGCCCG
TCGGATTTGAGTAAAACCCTTTATGTCGAATTGTTGAATCCGGGTGGGGAAGTCATAGCGAAACGTGTATTGCCTGTTAG
GAACGGCCGTTGCCACGGTAGTTTCGAATTAACACAATTACCTTTTTATTCCGGTTTTTATGAGGTTCGTGCTTACACGA
AATATATGTTGAACTTTGGAGAGGAGGTTATTTTCTCCCGGGTTCTTCCGGTATTTGATAAGCCACGGGCAGCTGGTGAT
TTTAAAGAAAAGAACATACAGAGATATGCTGTTTATAAATATCCGCAGGTACGGAAAAAAACGGCTAAGGAGAAAAAAGT
CAATCTGAAGTTTTTTCCTGAAGGAGGAAATTTGGTCGAAGGCATTCCTTCCCGCGTTGCTTTTGAGGCAACGGATGCCT
ATGGAAATCCGATCGCACTGTCCGGAACGGTTATCAACCGGGAAAAGAAAGAAATCGCCTCCTTTGCCACTGTACACGAA
GGACGTGGCACCTTTGTGTATACTCCTACGAACGGAGAGAATCATAAGGCTGAGGTGGAGTTGAATGGCAAAAAGTACCG
TTTTGATTTGCCGGAAGCCCGGTTGCAGGGATATGTCTTGCAAGTTGATAATCTTTCTTCGGAAGACAGTATAGCAGTCA
GTGTACAAAAGAATCCGCATACACCGGAGTCTGTCTTAGGCTTAGCTGTGCTTGGTCATGGGAAACTGCTTAATTATTGT
CTGTTGAACATCCGGAAAAATACACCTGTCTCTTTCAAACTTGACAAGACGGAATGGAAGGCAGGGGTGGCACAGATCGT
ATTGTTTGATACAGCAGGACAGATTATTGCCGACCGCCTTATCTTTATGAGAAAACCGGAGCCATTGACAATCAGTGTCC
GGAAAAACAAAGAGGATTATCAGCCGTTTGATCGTGTCTTATTGGACTTTTCAGTACGTGACACGGCGGGTAAGCCTGTG
TCCGCTCCGATATCAGTATCTGTGCGTGACGGATGGGAAGAAGTGGAAAGCCGGCATTCTATGTTAGCGGACTTATTGTT
AATGTCTGAGATTAAAGGCTACGTTCATCGTCCGCTCTATTATTTCGAAGCGGATGATAAAGAGCACAGAACAGCTTTGG
ATCACTTGTTGTTGGTGCAGGGATGGCGGCGTTATGCATGGAAATACGAGTCGGGGGTGGAACCGTTTGAATTGAAGTAC
ATGCCCGAACAAGGGATTGAAGTGCATGGACAAGTTGTTTCATTTGTTAGAGGTAAGCCTAAACCAAATATACAAGTCTC
TTCTTTTCTGGCGAAGCGGGGAGATGAGGAAACTTCGCCGGGAGCGCTTTCTCTTAACCTGTTTGAAACAGACAGTGTGG
GACGTTTTGCTTTTATTACCGATATTATTGGCAAGTGGAATCTGATTCTTTCTGTGATGGAGAAAGGTAAGCGGAAAGAC
CACCGGATTGTATTAGACAGAGTCTTCAGCCCTCAACCTACACAATATCCGCTGGGAGAAATGCAGATAAGCCTGTCCGG
CAGAGATAAACCGGGAGCAGAACAGGAACTACAGACAGATACTGTGATTGGTGATGATATCGATTATAATCGTTTTATGG
ATGCTTATGAAGATTCTCTGTCAAAACGGGGTATGAGAGAGAAAAATCACCGTTTGGGTGAAGTGGTGGTGAAGGCTAAG
AAATGGAGTCGTGAGAAGGATATTTATGAAAATCGTTCGAAGTCGGTTGCTTACTACGATGTACCTTCGGAGATGGATGA
TATTTTGGATAAGGGAGGTTATATCGGTGAAGATATCCACGAGCTACTTGTCCGTATGAATCCCAATTTCATACGCAGGT
ATAGTGGTGGTGAGGAATGGTTGCAGTACAAAGGTCGCTCTCCCTTGTATGTGATAAACTATAAACGAACGGAGGCTACT
GAAATAGATCAGACCCGATACCGGACACTTCGCCTGGTGGCTATCAAGTCTATTTATATCAACGAGGAGTTATCGGCAAG
ATGTCGTTATGCTGACATCCGTATGTCTCCGATGGATGTAGATGAAATATATGGTTGTGCTGTTTTTATTGAAACCTATC
CGGAAGGAGAGATTCCCGTAAAAGGAGGCAGGGGAGTCAGAAAAACTTGGTTGGATGGCTATAGCGAACCTGTAGAGTTT
TATCATCCCGATTATTCTGTTCTTCCCAAAGAAGAGGACTATCGCCGCACATTATACTGGAACCCGGAAGTGATGCCGGA
TGAAGCAGGGAATGCTCAGGTGAGGTTCTATAACAACAGTCGTTGCCGCAGGTTAAAAATAACGGCTGAAATGATTTCTG
CGGATGGGGCTATTGGCATGTTTAACGAGTGA

Upstream 100 bases:

>100_bases
CAATTCTTTTTCCTATATTTGGCTGGTAATCACTGGAGAACAGATTCTCTCCGGAGTAGGACAGATCTAATCTTAAACAC
GAATTTGAAATAGATGAATT

Downstream 100 bases:

>100_bases
TATAAAAAAAGAGGGTGTTTTGATACATTTACATTTGCAGTATTAAATATCACAACAAAATATAAGTGTATATTTGAAAA
GTAGAGTTGCAGTGAACTAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 863; Mature: 863

Protein sequence:

>863_residues
MMNRAILVLLFLLSALPFSLQAQMPDSIVRKLSGYIEAVQNFGEMLPQEKVYLHFDNTSYYQGDPVWFQCYVVTSELNRP
SDLSKTLYVELLNPGGEVIAKRVLPVRNGRCHGSFELTQLPFYSGFYEVRAYTKYMLNFGEEVIFSRVLPVFDKPRAAGD
FKEKNIQRYAVYKYPQVRKKTAKEKKVNLKFFPEGGNLVEGIPSRVAFEATDAYGNPIALSGTVINREKKEIASFATVHE
GRGTFVYTPTNGENHKAEVELNGKKYRFDLPEARLQGYVLQVDNLSSEDSIAVSVQKNPHTPESVLGLAVLGHGKLLNYC
LLNIRKNTPVSFKLDKTEWKAGVAQIVLFDTAGQIIADRLIFMRKPEPLTISVRKNKEDYQPFDRVLLDFSVRDTAGKPV
SAPISVSVRDGWEEVESRHSMLADLLLMSEIKGYVHRPLYYFEADDKEHRTALDHLLLVQGWRRYAWKYESGVEPFELKY
MPEQGIEVHGQVVSFVRGKPKPNIQVSSFLAKRGDEETSPGALSLNLFETDSVGRFAFITDIIGKWNLILSVMEKGKRKD
HRIVLDRVFSPQPTQYPLGEMQISLSGRDKPGAEQELQTDTVIGDDIDYNRFMDAYEDSLSKRGMREKNHRLGEVVVKAK
KWSREKDIYENRSKSVAYYDVPSEMDDILDKGGYIGEDIHELLVRMNPNFIRRYSGGEEWLQYKGRSPLYVINYKRTEAT
EIDQTRYRTLRLVAIKSIYINEELSARCRYADIRMSPMDVDEIYGCAVFIETYPEGEIPVKGGRGVRKTWLDGYSEPVEF
YHPDYSVLPKEEDYRRTLYWNPEVMPDEAGNAQVRFYNNSRCRRLKITAEMISADGAIGMFNE

Sequences:

>Translated_863_residues
MMNRAILVLLFLLSALPFSLQAQMPDSIVRKLSGYIEAVQNFGEMLPQEKVYLHFDNTSYYQGDPVWFQCYVVTSELNRP
SDLSKTLYVELLNPGGEVIAKRVLPVRNGRCHGSFELTQLPFYSGFYEVRAYTKYMLNFGEEVIFSRVLPVFDKPRAAGD
FKEKNIQRYAVYKYPQVRKKTAKEKKVNLKFFPEGGNLVEGIPSRVAFEATDAYGNPIALSGTVINREKKEIASFATVHE
GRGTFVYTPTNGENHKAEVELNGKKYRFDLPEARLQGYVLQVDNLSSEDSIAVSVQKNPHTPESVLGLAVLGHGKLLNYC
LLNIRKNTPVSFKLDKTEWKAGVAQIVLFDTAGQIIADRLIFMRKPEPLTISVRKNKEDYQPFDRVLLDFSVRDTAGKPV
SAPISVSVRDGWEEVESRHSMLADLLLMSEIKGYVHRPLYYFEADDKEHRTALDHLLLVQGWRRYAWKYESGVEPFELKY
MPEQGIEVHGQVVSFVRGKPKPNIQVSSFLAKRGDEETSPGALSLNLFETDSVGRFAFITDIIGKWNLILSVMEKGKRKD
HRIVLDRVFSPQPTQYPLGEMQISLSGRDKPGAEQELQTDTVIGDDIDYNRFMDAYEDSLSKRGMREKNHRLGEVVVKAK
KWSREKDIYENRSKSVAYYDVPSEMDDILDKGGYIGEDIHELLVRMNPNFIRRYSGGEEWLQYKGRSPLYVINYKRTEAT
EIDQTRYRTLRLVAIKSIYINEELSARCRYADIRMSPMDVDEIYGCAVFIETYPEGEIPVKGGRGVRKTWLDGYSEPVEF
YHPDYSVLPKEEDYRRTLYWNPEVMPDEAGNAQVRFYNNSRCRRLKITAEMISADGAIGMFNE
>Mature_863_residues
MMNRAILVLLFLLSALPFSLQAQMPDSIVRKLSGYIEAVQNFGEMLPQEKVYLHFDNTSYYQGDPVWFQCYVVTSELNRP
SDLSKTLYVELLNPGGEVIAKRVLPVRNGRCHGSFELTQLPFYSGFYEVRAYTKYMLNFGEEVIFSRVLPVFDKPRAAGD
FKEKNIQRYAVYKYPQVRKKTAKEKKVNLKFFPEGGNLVEGIPSRVAFEATDAYGNPIALSGTVINREKKEIASFATVHE
GRGTFVYTPTNGENHKAEVELNGKKYRFDLPEARLQGYVLQVDNLSSEDSIAVSVQKNPHTPESVLGLAVLGHGKLLNYC
LLNIRKNTPVSFKLDKTEWKAGVAQIVLFDTAGQIIADRLIFMRKPEPLTISVRKNKEDYQPFDRVLLDFSVRDTAGKPV
SAPISVSVRDGWEEVESRHSMLADLLLMSEIKGYVHRPLYYFEADDKEHRTALDHLLLVQGWRRYAWKYESGVEPFELKY
MPEQGIEVHGQVVSFVRGKPKPNIQVSSFLAKRGDEETSPGALSLNLFETDSVGRFAFITDIIGKWNLILSVMEKGKRKD
HRIVLDRVFSPQPTQYPLGEMQISLSGRDKPGAEQELQTDTVIGDDIDYNRFMDAYEDSLSKRGMREKNHRLGEVVVKAK
KWSREKDIYENRSKSVAYYDVPSEMDDILDKGGYIGEDIHELLVRMNPNFIRRYSGGEEWLQYKGRSPLYVINYKRTEAT
EIDQTRYRTLRLVAIKSIYINEELSARCRYADIRMSPMDVDEIYGCAVFIETYPEGEIPVKGGRGVRKTWLDGYSEPVEF
YHPDYSVLPKEEDYRRTLYWNPEVMPDEAGNAQVRFYNNSRCRRLKITAEMISADGAIGMFNE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 98995; Mature: 98995

Theoretical pI: Translated: 7.07; Mature: 7.07

Prosite motif: PS00133 CARBOXYPEPT_ZN_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMNRAILVLLFLLSALPFSLQAQMPDSIVRKLSGYIEAVQNFGEMLPQEKVYLHFDNTSY
CCCHHHHHHHHHHHHCCCEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCE
YQGDPVWFQCYVVTSELNRPSDLSKTLYVELLNPGGEVIAKRVLPVRNGRCHGSFELTQL
ECCCCEEEEEEEEEECCCCCCCCCCEEEEEEECCCHHHHHHHHCCCCCCCCCCCEEEEEC
PFYSGFYEVRAYTKYMLNFGEEVIFSRVLPVFDKPRAAGDFKEKNIQRYAVYKYPQVRKK
CCCCCHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCHHCCCEEEEEECCCHHHHH
TAKEKKVNLKFFPEGGNLVEGIPSRVAFEATDAYGNPIALSGTVINREKKEIASFATVHE
HHHHHEEEEEEECCCCCHHHCCCCCEEEEECCCCCCCEEEEEEEECCHHHHHHHHHHEEC
GRGTFVYTPTNGENHKAEVELNGKKYRFDLPEARLQGYVLQVDNLSSEDSIAVSVQKNPH
CCCCEEECCCCCCCCEEEEEECCCEEEECCCHHHHCEEEEEECCCCCCCCEEEEEECCCC
TPESVLGLAVLGHGKLLNYCLLNIRKNTPVSFKLDKTEWKAGVAQIVLFDTAGQIIADRL
CHHHHHHHHEECCCHHHHHHHHEEECCCCEEEEECHHHHHCCEEEEEEEECCCHHHHHHH
IFMRKPEPLTISVRKNKEDYQPFDRVLLDFSVRDTAGKPVSAPISVSVRDGWEEVESRHS
HEEECCCCEEEEEECCCCCCCHHHHHHEEEEECCCCCCCCCCCEEEEECCCHHHHHHHHH
MLADLLLMSEIKGYVHRPLYYFEADDKEHRTALDHLLLVQGWRRYAWKYESGVEPFELKY
HHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHEECCCCCCCEEEEE
MPEQGIEVHGQVVSFVRGKPKPNIQVSSFLAKRGDEETSPGALSLNLFETDSVGRFAFIT
CCCCCCCHHHHHHHHHCCCCCCCEEHHHHHHHCCCCCCCCCEEEEEEEECCCCCCHHHHH
DIIGKWNLILSVMEKGKRKDHRIVLDRVFSPQPTQYPLGEMQISLSGRDKPGAEQELQTD
HHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCEEEEECCCCCCCCHHHCCCC
TVIGDDIDYNRFMDAYEDSLSKRGMREKNHRLGEVVVKAKKWSREKDIYENRSKSVAYYD
CEECCCCCHHHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHCCCHHHHHHCCCCEEEEEE
VPSEMDDILDKGGYIGEDIHELLVRMNPNFIRRYSGGEEWLQYKGRSPLYVINYKRTEAT
CCHHHHHHHHCCCCCHHHHHHHHHHCCCCCEECCCCCHHHHHHCCCCCEEEEEECCCCCC
EIDQTRYRTLRLVAIKSIYINEELSARCRYADIRMSPMDVDEIYGCAVFIETYPEGEIPV
HHHHHHHHEEEEEEEEEEEECCCHHCCEEEEEEECCCCCHHHHCCEEEEEEECCCCCEEC
KGGRGVRKTWLDGYSEPVEFYHPDYSVLPKEEDYRRTLYWNPEVMPDEAGNAQVRFYNNS
CCCCCCHHHHHCCCCCCHHHCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCEEEEECCC
RCRRLKITAEMISADGAIGMFNE
CCEEEEEEHHHHCCCCCCCCCCC
>Mature Secondary Structure
MMNRAILVLLFLLSALPFSLQAQMPDSIVRKLSGYIEAVQNFGEMLPQEKVYLHFDNTSY
CCCHHHHHHHHHHHHCCCEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCE
YQGDPVWFQCYVVTSELNRPSDLSKTLYVELLNPGGEVIAKRVLPVRNGRCHGSFELTQL
ECCCCEEEEEEEEEECCCCCCCCCCEEEEEEECCCHHHHHHHHCCCCCCCCCCCEEEEEC
PFYSGFYEVRAYTKYMLNFGEEVIFSRVLPVFDKPRAAGDFKEKNIQRYAVYKYPQVRKK
CCCCCHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCHHCCCEEEEEECCCHHHHH
TAKEKKVNLKFFPEGGNLVEGIPSRVAFEATDAYGNPIALSGTVINREKKEIASFATVHE
HHHHHEEEEEEECCCCCHHHCCCCCEEEEECCCCCCCEEEEEEEECCHHHHHHHHHHEEC
GRGTFVYTPTNGENHKAEVELNGKKYRFDLPEARLQGYVLQVDNLSSEDSIAVSVQKNPH
CCCCEEECCCCCCCCEEEEEECCCEEEECCCHHHHCEEEEEECCCCCCCCEEEEEECCCC
TPESVLGLAVLGHGKLLNYCLLNIRKNTPVSFKLDKTEWKAGVAQIVLFDTAGQIIADRL
CHHHHHHHHEECCCHHHHHHHHEEECCCCEEEEECHHHHHCCEEEEEEEECCCHHHHHHH
IFMRKPEPLTISVRKNKEDYQPFDRVLLDFSVRDTAGKPVSAPISVSVRDGWEEVESRHS
HEEECCCCEEEEEECCCCCCCHHHHHHEEEEECCCCCCCCCCCEEEEECCCHHHHHHHHH
MLADLLLMSEIKGYVHRPLYYFEADDKEHRTALDHLLLVQGWRRYAWKYESGVEPFELKY
HHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHEECCCCCCCEEEEE
MPEQGIEVHGQVVSFVRGKPKPNIQVSSFLAKRGDEETSPGALSLNLFETDSVGRFAFIT
CCCCCCCHHHHHHHHHCCCCCCCEEHHHHHHHCCCCCCCCCEEEEEEEECCCCCCHHHHH
DIIGKWNLILSVMEKGKRKDHRIVLDRVFSPQPTQYPLGEMQISLSGRDKPGAEQELQTD
HHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCEEEEECCCCCCCCHHHCCCC
TVIGDDIDYNRFMDAYEDSLSKRGMREKNHRLGEVVVKAKKWSREKDIYENRSKSVAYYD
CEECCCCCHHHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHCCCHHHHHHCCCCEEEEEE
VPSEMDDILDKGGYIGEDIHELLVRMNPNFIRRYSGGEEWLQYKGRSPLYVINYKRTEAT
CCHHHHHHHHCCCCCHHHHHHHHHHCCCCCEECCCCCHHHHHHCCCCCEEEEEECCCCCC
EIDQTRYRTLRLVAIKSIYINEELSARCRYADIRMSPMDVDEIYGCAVFIETYPEGEIPV
HHHHHHHHEEEEEEEEEEEECCCHHCCEEEEEEECCCCCHHHHCCEEEEEEECCCCCEEC
KGGRGVRKTWLDGYSEPVEFYHPDYSVLPKEEDYRRTLYWNPEVMPDEAGNAQVRFYNNS
CCCCCCHHHHHCCCCCCHHHCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCEEEEECCC
RCRRLKITAEMISADGAIGMFNE
CCEEEEEEHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA