Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

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The map label for this gene is 29346473

Identifier: 29346473

GI number: 29346473

Start: 1350390

End: 1352090

Strand: Reverse

Name: 29346473

Synonym: BT_1063

Alternate gene names: NA

Gene position: 1352090-1350390 (Counterclockwise)

Preceding gene: 29346474

Following gene: 29346472

Centisome position: 21.6

GC content: 40.86

Gene sequence:

>1701_bases
ATGAAGAAAAAGAATTTTTTTATGTTAGCGCTTGCTGCTGTGGCTTTTGCTGCTTGTAGTAACGAAGATTTAGTGCCGAC
TGGGAATCCAGGTGATGATAATCAATTGGTGACAGACCCGACAGGAGACGCATGGGTGGCATTAGCTGTAAAGACTCCGG
TACAAACTCGTGGATTGCATAACCCGAATCAGGAAGCTGCAACAGAGGACGAATCAAAAATCACTACAGTGCGTGCCATA
TTCTTTACGGCAAATGCGAATGAGGATGCTGCAACTGTAACTGCTGACTTGACATTGGATAATGACGAAGCTGGTCTTGA
TGCCAATGGTATTCCTAGTGGGGCTGCAGGTAAGGCTTTTAAAGTCCCTGCAACTTCTAAACGAATATTGATTATTGCGA
ATCCATCTCCTAAATTTGAAGCAAAGACTGCTAGTGAGACAGATCAAAAATGGCCTGTTGGAACGACTTATGCAACAGTA
AATGCAGCTCTTGACGATACTTCGGCTTCTATGACAACTGCTGGTAAATTTATGATGTCTAACGCTAAGGGTTCGTTGGA
ACCTTCAGATGAAAATGAAGCTTCAGGGACATTTGGTGCTCCTGTCGATTTGGCTCTTTATGCAACTGAGACAGCAGCTA
CTAATAATCCAATATCTATCAGAATTGACCGTGTTGTATCAAAAGTTCGTGTATATGTTACTGCTGATTCTGATGCAAAG
GCAACTATTTCGGATGCGGGATGGGTGTTGAATGCTACTAACAAGACATTCTTCCCTGTATCTAAGAGAACGTTGACTTG
GAATGAGACTCCTGCTAATAAACCTTTAGGTGCTCGTGGTACATGTATTACTCCGTTTGACCAGTATAAGATCGGTTCAT
ACAGAGTTGACCCTAACTATAGTACTCAAGCTTTGGCTAACTATAATGCTTATACCAGTACTTCAGCTCCTTCAATTTGG
AATGATCCTACAACTACGGTGAATAAAGTTGCTGAATATTGTCTTGAAAATACGCAGACTGCAACTCATAATGTACATGC
TTATACTACACATGTACTGTTGAAGGCTAAATTCATTCCGTCTGAATATGGCAGACCTGCGCCAAATGATGGTACTCCAT
CTACAGCTCAGGAAACAGATCCGAAACTTGTCGGTGACTGGATGTTAATCAATGGTGGCTTCTATACTTTTGCTACATTA
ATGGAGTGGATTGAGGCAGAATTGAAAGCTAAATATGCTGATAAAGAGCCTACTACCTTCCCGACTGCTCGTACTACTGC
GTATAATAGATATTTAGCTGCTGTTGGTGTAGGTGAAATTAGCCTTCCTGCTACAGCTGATGCTACAGCTATTACCAGTC
TTGTTGACGATTTTAAAGCAACAAAAGCTAATGTAGGAAATGTTGCAGCTAAAGACAGAGCTATAACTGTAACAGGTCTT
ACTTATTATGTAGGTGCTGTAAGTTACTACAAAATTATGATCAAACATGATGATACCAGTGCTGTAACAAATGAATTAGG
TGAATTTGGAGTTGTTCGTAACTCTGTTTACGATATCAATGTTAAGAAGTTTAACAATCCAGGATATCCGGCTATTCCGG
ATCCGGACGAAGGAACGCCGGATGAGAGTGACGAAGGCTGGTTGTCTATTGAAATTATACCTAATCCTTGGACTTGGTAT
ACTCAAGAGGAAATTATGTAA

Upstream 100 bases:

>100_bases
GGAACTGGCTAAGAAAAAAACGAATGCAGCTGAAATAGAAAAAATAGAAAATAGGGATAAATAAACTAGTTACAAACGCT
TTTATTAATTTGTAAAAACA

Downstream 100 bases:

>100_bases
TTCGGAATTAGTAATAGAAATAGATTTTTCAAATAAAAGTTGTGGGAGAAACTCTCCCACAACTTTACTCCCAATATTTT
CAAAGTTGCCGAAAACTTTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 566; Mature: 566

Protein sequence:

>566_residues
MKKKNFFMLALAAVAFAACSNEDLVPTGNPGDDNQLVTDPTGDAWVALAVKTPVQTRGLHNPNQEAATEDESKITTVRAI
FFTANANEDAATVTADLTLDNDEAGLDANGIPSGAAGKAFKVPATSKRILIIANPSPKFEAKTASETDQKWPVGTTYATV
NAALDDTSASMTTAGKFMMSNAKGSLEPSDENEASGTFGAPVDLALYATETAATNNPISIRIDRVVSKVRVYVTADSDAK
ATISDAGWVLNATNKTFFPVSKRTLTWNETPANKPLGARGTCITPFDQYKIGSYRVDPNYSTQALANYNAYTSTSAPSIW
NDPTTTVNKVAEYCLENTQTATHNVHAYTTHVLLKAKFIPSEYGRPAPNDGTPSTAQETDPKLVGDWMLINGGFYTFATL
MEWIEAELKAKYADKEPTTFPTARTTAYNRYLAAVGVGEISLPATADATAITSLVDDFKATKANVGNVAAKDRAITVTGL
TYYVGAVSYYKIMIKHDDTSAVTNELGEFGVVRNSVYDINVKKFNNPGYPAIPDPDEGTPDESDEGWLSIEIIPNPWTWY
TQEEIM

Sequences:

>Translated_566_residues
MKKKNFFMLALAAVAFAACSNEDLVPTGNPGDDNQLVTDPTGDAWVALAVKTPVQTRGLHNPNQEAATEDESKITTVRAI
FFTANANEDAATVTADLTLDNDEAGLDANGIPSGAAGKAFKVPATSKRILIIANPSPKFEAKTASETDQKWPVGTTYATV
NAALDDTSASMTTAGKFMMSNAKGSLEPSDENEASGTFGAPVDLALYATETAATNNPISIRIDRVVSKVRVYVTADSDAK
ATISDAGWVLNATNKTFFPVSKRTLTWNETPANKPLGARGTCITPFDQYKIGSYRVDPNYSTQALANYNAYTSTSAPSIW
NDPTTTVNKVAEYCLENTQTATHNVHAYTTHVLLKAKFIPSEYGRPAPNDGTPSTAQETDPKLVGDWMLINGGFYTFATL
MEWIEAELKAKYADKEPTTFPTARTTAYNRYLAAVGVGEISLPATADATAITSLVDDFKATKANVGNVAAKDRAITVTGL
TYYVGAVSYYKIMIKHDDTSAVTNELGEFGVVRNSVYDINVKKFNNPGYPAIPDPDEGTPDESDEGWLSIEIIPNPWTWY
TQEEIM
>Mature_566_residues
MKKKNFFMLALAAVAFAACSNEDLVPTGNPGDDNQLVTDPTGDAWVALAVKTPVQTRGLHNPNQEAATEDESKITTVRAI
FFTANANEDAATVTADLTLDNDEAGLDANGIPSGAAGKAFKVPATSKRILIIANPSPKFEAKTASETDQKWPVGTTYATV
NAALDDTSASMTTAGKFMMSNAKGSLEPSDENEASGTFGAPVDLALYATETAATNNPISIRIDRVVSKVRVYVTADSDAK
ATISDAGWVLNATNKTFFPVSKRTLTWNETPANKPLGARGTCITPFDQYKIGSYRVDPNYSTQALANYNAYTSTSAPSIW
NDPTTTVNKVAEYCLENTQTATHNVHAYTTHVLLKAKFIPSEYGRPAPNDGTPSTAQETDPKLVGDWMLINGGFYTFATL
MEWIEAELKAKYADKEPTTFPTARTTAYNRYLAAVGVGEISLPATADATAITSLVDDFKATKANVGNVAAKDRAITVTGL
TYYVGAVSYYKIMIKHDDTSAVTNELGEFGVVRNSVYDINVKKFNNPGYPAIPDPDEGTPDESDEGWLSIEIIPNPWTWY
TQEEIM

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 60954; Mature: 60954

Theoretical pI: Translated: 4.51; Mature: 4.51

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKKNFFMLALAAVAFAACSNEDLVPTGNPGDDNQLVTDPTGDAWVALAVKTPVQTRGLH
CCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCCEEEEEEEECCHHHCCCC
NPNQEAATEDESKITTVRAIFFTANANEDAATVTADLTLDNDEAGLDANGIPSGAAGKAF
CCCHHHCCCCCHHEEEEEEEEEEECCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCEE
KVPATSKRILIIANPSPKFEAKTASETDQKWPVGTTYATVNAALDDTSASMTTAGKFMMS
ECCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCHHHCCEEEEE
NAKGSLEPSDENEASGTFGAPVDLALYATETAATNNPISIRIDRVVSKVRVYVTADSDAK
CCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCEEEEHHHEEEEEEEEEEECCCCC
ATISDAGWVLNATNKTFFPVSKRTLTWNETPANKPLGARGTCITPFDQYKIGSYRVDPNY
EEECCCCEEEECCCCEEEECCCEEEEECCCCCCCCCCCCCCEECCHHHEECCCEEECCCC
STQALANYNAYTSTSAPSIWNDPTTTVNKVAEYCLENTQTATHNVHAYTTHVLLKAKFIP
CCHHEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEEEEEEEEEEEECC
SEYGRPAPNDGTPSTAQETDPKLVGDWMLINGGFYTFATLMEWIEAELKAKYADKEPTTF
HHCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCC
PTARTTAYNRYLAAVGVGEISLPATADATAITSLVDDFKATKANVGNVAAKDRAITVTGL
CCHHHHHHHEEEEEEECCCEECCCCCCHHHHHHHHHHHHHHHCCCCCEEECCCEEEEECH
TYYVGAVSYYKIMIKHDDTSAVTNELGEFGVVRNSVYDINVKKFNNPGYPAIPDPDEGTP
HHHHHCEEEEEEEEEECCHHHHHHHHHHHCEEECEEEEEEEEEECCCCCCCCCCCCCCCC
DESDEGWLSIEIIPNPWTWYTQEEIM
CCCCCCEEEEEEECCCCCCCCHHHCC
>Mature Secondary Structure
MKKKNFFMLALAAVAFAACSNEDLVPTGNPGDDNQLVTDPTGDAWVALAVKTPVQTRGLH
CCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCCEEEEEEEECCHHHCCCC
NPNQEAATEDESKITTVRAIFFTANANEDAATVTADLTLDNDEAGLDANGIPSGAAGKAF
CCCHHHCCCCCHHEEEEEEEEEEECCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCEE
KVPATSKRILIIANPSPKFEAKTASETDQKWPVGTTYATVNAALDDTSASMTTAGKFMMS
ECCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCHHHCCEEEEE
NAKGSLEPSDENEASGTFGAPVDLALYATETAATNNPISIRIDRVVSKVRVYVTADSDAK
CCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCEEEEHHHEEEEEEEEEEECCCCC
ATISDAGWVLNATNKTFFPVSKRTLTWNETPANKPLGARGTCITPFDQYKIGSYRVDPNY
EEECCCCEEEECCCCEEEECCCEEEEECCCCCCCCCCCCCCEECCHHHEECCCEEECCCC
STQALANYNAYTSTSAPSIWNDPTTTVNKVAEYCLENTQTATHNVHAYTTHVLLKAKFIP
CCHHEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEEEEEEEEEEEECC
SEYGRPAPNDGTPSTAQETDPKLVGDWMLINGGFYTFATLMEWIEAELKAKYADKEPTTF
HHCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCC
PTARTTAYNRYLAAVGVGEISLPATADATAITSLVDDFKATKANVGNVAAKDRAITVTGL
CCHHHHHHHEEEEEEECCCEECCCCCCHHHHHHHHHHHHHHHCCCCCEEECCCEEEEECH
TYYVGAVSYYKIMIKHDDTSAVTNELGEFGVVRNSVYDINVKKFNNPGYPAIPDPDEGTP
HHHHHCEEEEEEEEEECCHHHHHHHHHHHCEEECEEEEEEEEEECCCCCCCCCCCCCCCC
DESDEGWLSIEIIPNPWTWYTQEEIM
CCCCCCEEEEEEECCCCCCCCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA