Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

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The map label for this gene is 29346472

Identifier: 29346472

GI number: 29346472

Start: 1349217

End: 1350170

Strand: Reverse

Name: 29346472

Synonym: BT_1062

Alternate gene names: NA

Gene position: 1350170-1349217 (Counterclockwise)

Preceding gene: 29346473

Following gene: 29346469

Centisome position: 21.57

GC content: 40.67

Gene sequence:

>954_bases
ATGAATCTAAAAAGCCTTATATGTTACGTTGCCTTAGGTATTCTGTTGATGAGTTCCGGGATAGTAGCTTCATGCGACAG
CTTTAATGAAGACCTGCCGGAATGCCGCTTGTCAGTGAAGTTCAAGTATGACTATAACATGGAGTTTGCGGATGCGTTTC
ATGCTCAGGTAGATAAAGTAGAACTTTATGTATTTGATAAGAATGGGAAATATCTGTTTAAACAAGCTGAAGAGGGAAGT
GCATTGTCTACCGGCAATTATCTGATGGAAGTTGAACTTCCTGTCGGACAATATCAGTTTATGGCATGGGCCGGTGCACG
TGATTCATATGATATCACTTCATTGACACCTGGTGTCTCTACTCTTACGGATTTAAAATTGAAACTAAAACGTGAAGCCT
CTCTCATCATCAATAAAAGGATGGAAACGCTCTGGTATGGTGAAGTCATCAATGTCAACTTCGATGGGACCGTCCACCAG
ACTGAGACGATAAATCTGATCAGAGATACAAAAATCGTACGATTTGGCTTCCAGTCTTATACAGGCAGCTGGACACTGGA
TATGAATGACTATGACTATGAGATTATAGAATCCAATGGACATCTGGGACATGATAATTCATTACTGGATGATGATGTGT
TGAGTTTCCGACCTTACTATATGGAACAGAAGGATCCTGCGACTGCCTATGTAGACATGAATACAATGAGGCTGATGGAA
GACCGGAAAACTCGTTTGGTGCTTACTGAAAAAGCATCCGGAAAGAGAGTGTTCGATATAAATCTGATTGATTATCTTGC
TATGACCAATGCGGAGGGTAAAAATCTGAGCACACAAGAATATCTGGATCGACAGAGCAACTATCATATAATCTTTTTCT
TGTCTGAATCATGGCTTGCTGTACAGATTGTTGTCAATGGATGGGTGCATCGCATTCAGGAAGAGAATCAATAG

Upstream 100 bases:

>100_bases
TTTTGATGGAATCAATAAAGTATTCTATCCTCTGAATTAGGAAATAACGAGAAAAGAGATTATTTCTTTTCCTCTATATA
TAATTGAAAAAAAGGAAAAT

Downstream 100 bases:

>100_bases
AATGATCTAAGAATAGTGGGGAACTATTATTAGTGGGACAGGATAAATAGTAATATCCTGAAGGGAGAACAGCCCGGGTC
GATAATGATCCGGGCTGTTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 317; Mature: 317

Protein sequence:

>317_residues
MNLKSLICYVALGILLMSSGIVASCDSFNEDLPECRLSVKFKYDYNMEFADAFHAQVDKVELYVFDKNGKYLFKQAEEGS
ALSTGNYLMEVELPVGQYQFMAWAGARDSYDITSLTPGVSTLTDLKLKLKREASLIINKRMETLWYGEVINVNFDGTVHQ
TETINLIRDTKIVRFGFQSYTGSWTLDMNDYDYEIIESNGHLGHDNSLLDDDVLSFRPYYMEQKDPATAYVDMNTMRLME
DRKTRLVLTEKASGKRVFDINLIDYLAMTNAEGKNLSTQEYLDRQSNYHIIFFLSESWLAVQIVVNGWVHRIQEENQ

Sequences:

>Translated_317_residues
MNLKSLICYVALGILLMSSGIVASCDSFNEDLPECRLSVKFKYDYNMEFADAFHAQVDKVELYVFDKNGKYLFKQAEEGS
ALSTGNYLMEVELPVGQYQFMAWAGARDSYDITSLTPGVSTLTDLKLKLKREASLIINKRMETLWYGEVINVNFDGTVHQ
TETINLIRDTKIVRFGFQSYTGSWTLDMNDYDYEIIESNGHLGHDNSLLDDDVLSFRPYYMEQKDPATAYVDMNTMRLME
DRKTRLVLTEKASGKRVFDINLIDYLAMTNAEGKNLSTQEYLDRQSNYHIIFFLSESWLAVQIVVNGWVHRIQEENQ
>Mature_317_residues
MNLKSLICYVALGILLMSSGIVASCDSFNEDLPECRLSVKFKYDYNMEFADAFHAQVDKVELYVFDKNGKYLFKQAEEGS
ALSTGNYLMEVELPVGQYQFMAWAGARDSYDITSLTPGVSTLTDLKLKLKREASLIINKRMETLWYGEVINVNFDGTVHQ
TETINLIRDTKIVRFGFQSYTGSWTLDMNDYDYEIIESNGHLGHDNSLLDDDVLSFRPYYMEQKDPATAYVDMNTMRLME
DRKTRLVLTEKASGKRVFDINLIDYLAMTNAEGKNLSTQEYLDRQSNYHIIFFLSESWLAVQIVVNGWVHRIQEENQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36537; Mature: 36537

Theoretical pI: Translated: 4.56; Mature: 4.56

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLKSLICYVALGILLMSSGIVASCDSFNEDLPECRLSVKFKYDYNMEFADAFHAQVDKV
CCHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCEEEEEEEEECCCHHHHHHHCEEEEE
ELYVFDKNGKYLFKQAEEGSALSTGNYLMEVELPVGQYQFMAWAGARDSYDITSLTPGVS
EEEEEECCCCEEEEECCCCCEEECCCEEEEEECCCCCEEEEEEECCCCCCCEEECCCCCH
TLTDLKLKLKREASLIINKRMETLWYGEVINVNFDGTVHQTETINLIRDTKIVRFGFQSY
HHHHHHEEEHHHHHHHHHHHHHEEEECEEEEEECCCEEECCEEEEEEECCEEEEEECCCC
TGSWTLDMNDYDYEIIESNGHLGHDNSLLDDDVLSFRPYYMEQKDPATAYVDMNTMRLME
CCEEEEECCCCCEEEEECCCCCCCCCCCCCCHHHHCCCCEECCCCCCEEEEECHHHHHHH
DRKTRLVLTEKASGKRVFDINLIDYLAMTNAEGKNLSTQEYLDRQSNYHIIFFLSESWLA
CCCEEEEEEECCCCCEEEEEEHHHEEEECCCCCCCCCHHHHHHCCCCEEEEEEECCCCEE
VQIVVNGWVHRIQEENQ
EEEEEHHHHHHHHCCCC
>Mature Secondary Structure
MNLKSLICYVALGILLMSSGIVASCDSFNEDLPECRLSVKFKYDYNMEFADAFHAQVDKV
CCHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCEEEEEEEEECCCHHHHHHHCEEEEE
ELYVFDKNGKYLFKQAEEGSALSTGNYLMEVELPVGQYQFMAWAGARDSYDITSLTPGVS
EEEEEECCCCEEEEECCCCCEEECCCEEEEEECCCCCEEEEEEECCCCCCCEEECCCCCH
TLTDLKLKLKREASLIINKRMETLWYGEVINVNFDGTVHQTETINLIRDTKIVRFGFQSY
HHHHHHEEEHHHHHHHHHHHHHEEEECEEEEEECCCEEECCEEEEEEECCEEEEEECCCC
TGSWTLDMNDYDYEIIESNGHLGHDNSLLDDDVLSFRPYYMEQKDPATAYVDMNTMRLME
CCEEEEECCCCCEEEEECCCCCCCCCCCCCCHHHHCCCCEECCCCCCEEEEECHHHHHHH
DRKTRLVLTEKASGKRVFDINLIDYLAMTNAEGKNLSTQEYLDRQSNYHIIFFLSESWLA
CCCEEEEEEECCCCCEEEEEEHHHEEEECCCCCCCCCHHHHHHCCCCEEEEEEECCCCEE
VQIVVNGWVHRIQEENQ
EEEEEHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA