| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29346474
Identifier: 29346474
GI number: 29346474
Start: 1352127
End: 1353305
Strand: Reverse
Name: 29346474
Synonym: BT_1064
Alternate gene names: NA
Gene position: 1353305-1352127 (Counterclockwise)
Preceding gene: 29346475
Following gene: 29346473
Centisome position: 21.62
GC content: 42.49
Gene sequence:
>1179_bases ATGTGGTGGAAACAGGGTAGCAAGAAAAGAAATGATACGATTCGATACAGATATATATTGCCTTACGAATCGTGGATGGA CGATGCCCGGGTGGACGTACAGCGCGACGAATGCGGCTGCGGCGAAATTCAGCTGATGGATGTGGAACCACTTGGGGATA TTGAACTGGAACGTATATTAGTACCTTACGTGGTAACACCTTTCTTTGCCTATTTGCAGCCTAAAGCGGAAGAAGTGAAG AGCCGTGATATACAGGCGGAATGTTTCCTTGACTTCGAGGTGAACAAGATTAATATTCGTCCGGAATATATGAATAACCC GAAGGAGCTGGCTAAGATCCGTGCGATGATTGATGAATTGAAGTCTGATCCTAGTATCAAGGTAAACAAATTGGATATTG TAGGCTATGCTTCACCTGAAGGATCATTGGCAAATAACAAACGTCTGTCCGAAGGACGTGCGATGGCGCTACGTGATTAT CTGGCATCCAGATACGATTTCTCGAGAAATCAGTATTATATCATCTTTGGTGGTGAAAACTGGGATGGACTGGTGAAGGC GCTGGATACGATTGATTTTGAATATAAAGATGAAGCGCTGAATATTATCAATGATATCCCTGTTGAAAAAGGTAGGGAAG CTAAGTTGATGCAGCTTCGTGGCGGAGTACCTTATCGATATATGTTGAAATATATATTCCCAAGTCTTCGTGTGGCTATT TGTAAGGTGAATTATGAGATTAAGAACTTTAATCTGGACGAAGCGAAAGAGATCATAAAGACACGTCCTCAGAATCTGAG CCTGAATGAAATGTTTATGGTTGCCAACAGCTATCCGAAGGGTTCTCAGGAATTCATCGATGTGTTCGAGACTGCGGTCC GAATGTATCCGAAGGATGAGATCGCCAGTATTAATGCTGCCGCTGCTGCTCTTTCGCGTAATGACTTGGTATCTGCGGAA CGCTATCTGAATATGGTAAATGTCAATAAGCAGCTGCCTGAGTATAGCAATGCTATGGGTGTATTAATGTTATTAAAAGG AGAGTATGAACATGCGGAAGAATATTTGAAAGCCGCAGCCAAATCGGGTCTGCAAGCTGCCGGACAGAATTTGGAGGAAC TGGCTAAGAAAAAAACGAATGCAGCTGAAATAGAAAAAATAGAAAATAGGGATAAATAA
Upstream 100 bases:
>100_bases CTTCCGAAAGTATCCATCAAGGGACATAATGAATACCTGGCGTATGAACGCTGGCTTTCATTGATGAGTGCGAAGGAGAA GGATAGCTACGAAAAACCTT
Downstream 100 bases:
>100_bases ACTAGTTACAAACGCTTTTATTAATTTGTAAAAACAATGAAGAAAAAGAATTTTTTTATGTTAGCGCTTGCTGCTGTGGC TTTTGCTGCTTGTAGTAACG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 392; Mature: 392
Protein sequence:
>392_residues MWWKQGSKKRNDTIRYRYILPYESWMDDARVDVQRDECGCGEIQLMDVEPLGDIELERILVPYVVTPFFAYLQPKAEEVK SRDIQAECFLDFEVNKINIRPEYMNNPKELAKIRAMIDELKSDPSIKVNKLDIVGYASPEGSLANNKRLSEGRAMALRDY LASRYDFSRNQYYIIFGGENWDGLVKALDTIDFEYKDEALNIINDIPVEKGREAKLMQLRGGVPYRYMLKYIFPSLRVAI CKVNYEIKNFNLDEAKEIIKTRPQNLSLNEMFMVANSYPKGSQEFIDVFETAVRMYPKDEIASINAAAAALSRNDLVSAE RYLNMVNVNKQLPEYSNAMGVLMLLKGEYEHAEEYLKAAAKSGLQAAGQNLEELAKKKTNAAEIEKIENRDK
Sequences:
>Translated_392_residues MWWKQGSKKRNDTIRYRYILPYESWMDDARVDVQRDECGCGEIQLMDVEPLGDIELERILVPYVVTPFFAYLQPKAEEVK SRDIQAECFLDFEVNKINIRPEYMNNPKELAKIRAMIDELKSDPSIKVNKLDIVGYASPEGSLANNKRLSEGRAMALRDY LASRYDFSRNQYYIIFGGENWDGLVKALDTIDFEYKDEALNIINDIPVEKGREAKLMQLRGGVPYRYMLKYIFPSLRVAI CKVNYEIKNFNLDEAKEIIKTRPQNLSLNEMFMVANSYPKGSQEFIDVFETAVRMYPKDEIASINAAAAALSRNDLVSAE RYLNMVNVNKQLPEYSNAMGVLMLLKGEYEHAEEYLKAAAKSGLQAAGQNLEELAKKKTNAAEIEKIENRDK >Mature_392_residues MWWKQGSKKRNDTIRYRYILPYESWMDDARVDVQRDECGCGEIQLMDVEPLGDIELERILVPYVVTPFFAYLQPKAEEVK SRDIQAECFLDFEVNKINIRPEYMNNPKELAKIRAMIDELKSDPSIKVNKLDIVGYASPEGSLANNKRLSEGRAMALRDY LASRYDFSRNQYYIIFGGENWDGLVKALDTIDFEYKDEALNIINDIPVEKGREAKLMQLRGGVPYRYMLKYIFPSLRVAI CKVNYEIKNFNLDEAKEIIKTRPQNLSLNEMFMVANSYPKGSQEFIDVFETAVRMYPKDEIASINAAAAALSRNDLVSAE RYLNMVNVNKQLPEYSNAMGVLMLLKGEYEHAEEYLKAAAKSGLQAAGQNLEELAKKKTNAAEIEKIENRDK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45126; Mature: 45126
Theoretical pI: Translated: 5.00; Mature: 5.00
Prosite motif: PS00237 G_PROTEIN_RECEP_F1_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MWWKQGSKKRNDTIRYRYILPYESWMDDARVDVQRDECGCGEIQLMDVEPLGDIELERIL CCCCCCCCCCCCCEEEEEECCHHHHCCCCCEEEECCCCCCCCEEEEECCCCCCCCHHHHH VPYVVTPFFAYLQPKAEEVKSRDIQAECFLDFEVNKINIRPEYMNNPKELAKIRAMIDEL HHHHHHHHHHHHCCCHHHHHCCCCCEEEEEEEEEEEEEECHHHCCCHHHHHHHHHHHHHH KSDPSIKVNKLDIVGYASPEGSLANNKRLSEGRAMALRDYLASRYDFSRNQYYIIFGGEN CCCCCEEEEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCC WDGLVKALDTIDFEYKDEALNIINDIPVEKGREAKLMQLRGGVPYRYMLKYIFPSLRVAI HHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHEEEE CKVNYEIKNFNLDEAKEIIKTRPQNLSLNEMFMVANSYPKGSQEFIDVFETAVRMYPKDE EEEEEEEECCCHHHHHHHHHCCCCCCCHHHEEEEECCCCCCHHHHHHHHHHHHHHCCCHH IASINAAAAALSRNDLVSAERYLNMVNVNKQLPEYSNAMGVLMLLKGEYEHAEEYLKAAA HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCEEEEEECCCHHHHHHHHHHHH KSGLQAAGQNLEELAKKKTNAAEIEKIENRDK HHHHHHHCCCHHHHHHHCCCHHHHHHHHCCCC >Mature Secondary Structure MWWKQGSKKRNDTIRYRYILPYESWMDDARVDVQRDECGCGEIQLMDVEPLGDIELERIL CCCCCCCCCCCCCEEEEEECCHHHHCCCCCEEEECCCCCCCCEEEEECCCCCCCCHHHHH VPYVVTPFFAYLQPKAEEVKSRDIQAECFLDFEVNKINIRPEYMNNPKELAKIRAMIDEL HHHHHHHHHHHHCCCHHHHHCCCCCEEEEEEEEEEEEEECHHHCCCHHHHHHHHHHHHHH KSDPSIKVNKLDIVGYASPEGSLANNKRLSEGRAMALRDYLASRYDFSRNQYYIIFGGEN CCCCCEEEEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCC WDGLVKALDTIDFEYKDEALNIINDIPVEKGREAKLMQLRGGVPYRYMLKYIFPSLRVAI HHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHEEEE CKVNYEIKNFNLDEAKEIIKTRPQNLSLNEMFMVANSYPKGSQEFIDVFETAVRMYPKDE EEEEEEEECCCHHHHHHHHHCCCCCCCHHHEEEEECCCCCCHHHHHHHHHHHHHHCCCHH IASINAAAAALSRNDLVSAERYLNMVNVNKQLPEYSNAMGVLMLLKGEYEHAEEYLKAAA HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCEEEEEECCCHHHHHHHHHHHH KSGLQAAGQNLEELAKKKTNAAEIEKIENRDK HHHHHHHCCCHHHHHHHCCCHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA