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The map label for this gene is yfbG [C]

Identifier: 29346469

GI number: 29346469

Start: 1345817

End: 1346746

Strand: Reverse

Name: yfbG [C]

Synonym: BT_1059

Alternate gene names: 29346469

Gene position: 1346746-1345817 (Counterclockwise)

Preceding gene: 29346472

Following gene: 29346468

Centisome position: 21.51

GC content: 43.01

Gene sequence:

>930_bases
ATGAAAAGAATATTGGTAAGTGGCGGGGCTGGATTTATAGGCTCGCATCTTTGTACTCGACTTGTAAATGAGGGACACGA
CGTTATATGTTTGGATAACTTCTTTACAGGTTCTAAGGACAATATAAAGCATTTGATGGGAAACCATCATTTTGAAGTTG
TAAGACACGACGTTACTTATCCTTATTCTGCCGAAGTGGATGAAATTTACAATCTGGCTTGTCCGGCGTCACCCATTCAT
TACCAACATGATCCGATTCAAACTGCCAAAACATCTGTGATGGGGGCTATCAATATGCTCGGACTGGCGATGAGACTGGA
TGCCAAAATACTGCAAGCCTCCACTAGCGAAGTGTATGGTGATCCAATTATTCATCCTCAGCCGGAAAGCTATTGGGGAA
ATGTGAATCCGGTAGGTTATCGCTCATGTTATGATGAAGGAAAGAGATGTGCTGAAACCTTGTTTATGGATTACTACCGC
CAGAATCAGACTCGCATCAAGATCATTCGTATCTTTAATACTTATGGTCCGAGAATGCTTCCTAATGATGGTCGTGTGGT
CTCAAACTTTATCATACAGGCGCTGAATAATGAAGATATCACGATATATGGTGATGGGAAACAGACACGCAGTTTTCAGT
ATATCGATGACCTGATAGAAGGAATGGTGCGGATGATGGATACGGAGGATGACTTTACGGGTCCGATAAATATTGGAAAT
CCGAATGAGTTTCCGGTTCTTGAATTGGCGGAAAGAGTGATCCGGATGACTGGCTCTACTTCGAAGATAGTTTTTAAACC
TCTGCCGACCGATGATCCGAAACAGCGTCAGCCGGATATAAAACTGGCAAAAGAGAAACTGGGATGGCAGCCTACCGTCG
AGCTGGAAGATGGGCTGAAGCGTATGATTGAGTATTTTAAAAATGTCTGA

Upstream 100 bases:

>100_bases
ACCTTTAAAATTGTATATTATGAGCAAATCGTTTACATTTGCCTCTATAAACAAGACGGGGAAGTTCTCTTCTCTGAAAA
ACAATAGTTAAAATTAGAAG

Downstream 100 bases:

>100_bases
TGTAACATAAAAAATAGAATGATATGAATGTGGAAATTAATCCTTCCGAATATAAGGTCCTTATTGTGGACGACGTAATT
TCAAATGTCCTTCTGCTGAA

Product: putative UDP-glucose 4-epimerase

Products: NA

Alternate protein names: Galactowaldenase; UDP-galactose 4-epimerase [H]

Number of amino acids: Translated: 309; Mature: 309

Protein sequence:

>309_residues
MKRILVSGGAGFIGSHLCTRLVNEGHDVICLDNFFTGSKDNIKHLMGNHHFEVVRHDVTYPYSAEVDEIYNLACPASPIH
YQHDPIQTAKTSVMGAINMLGLAMRLDAKILQASTSEVYGDPIIHPQPESYWGNVNPVGYRSCYDEGKRCAETLFMDYYR
QNQTRIKIIRIFNTYGPRMLPNDGRVVSNFIIQALNNEDITIYGDGKQTRSFQYIDDLIEGMVRMMDTEDDFTGPINIGN
PNEFPVLELAERVIRMTGSTSKIVFKPLPTDDPKQRQPDIKLAKEKLGWQPTVELEDGLKRMIEYFKNV

Sequences:

>Translated_309_residues
MKRILVSGGAGFIGSHLCTRLVNEGHDVICLDNFFTGSKDNIKHLMGNHHFEVVRHDVTYPYSAEVDEIYNLACPASPIH
YQHDPIQTAKTSVMGAINMLGLAMRLDAKILQASTSEVYGDPIIHPQPESYWGNVNPVGYRSCYDEGKRCAETLFMDYYR
QNQTRIKIIRIFNTYGPRMLPNDGRVVSNFIIQALNNEDITIYGDGKQTRSFQYIDDLIEGMVRMMDTEDDFTGPINIGN
PNEFPVLELAERVIRMTGSTSKIVFKPLPTDDPKQRQPDIKLAKEKLGWQPTVELEDGLKRMIEYFKNV
>Mature_309_residues
MKRILVSGGAGFIGSHLCTRLVNEGHDVICLDNFFTGSKDNIKHLMGNHHFEVVRHDVTYPYSAEVDEIYNLACPASPIH
YQHDPIQTAKTSVMGAINMLGLAMRLDAKILQASTSEVYGDPIIHPQPESYWGNVNPVGYRSCYDEGKRCAETLFMDYYR
QNQTRIKIIRIFNTYGPRMLPNDGRVVSNFIIQALNNEDITIYGDGKQTRSFQYIDDLIEGMVRMMDTEDDFTGPINIGN
PNEFPVLELAERVIRMTGSTSKIVFKPLPTDDPKQRQPDIKLAKEKLGWQPTVELEDGLKRMIEYFKNV

Specific function: Unknown

COG id: COG0451

COG function: function code MG; Nucleoside-diphosphate-sugar epimerases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sugar epimerase family [H]

Homologues:

Organism=Homo sapiens, GI42516563, Length=306, Percent_Identity=54.9019607843137, Blast_Score=374, Evalue=1e-104,
Organism=Homo sapiens, GI7657641, Length=332, Percent_Identity=27.1084337349398, Blast_Score=106, Evalue=3e-23,
Organism=Escherichia coli, GI1788589, Length=345, Percent_Identity=25.7971014492754, Blast_Score=97, Evalue=9e-22,
Organism=Escherichia coli, GI48994969, Length=340, Percent_Identity=23.5294117647059, Blast_Score=86, Evalue=5e-18,
Organism=Escherichia coli, GI1786974, Length=329, Percent_Identity=26.1398176291793, Blast_Score=81, Evalue=1e-16,
Organism=Escherichia coli, GI1788353, Length=337, Percent_Identity=22.8486646884273, Blast_Score=75, Evalue=4e-15,
Organism=Escherichia coli, GI1788365, Length=325, Percent_Identity=24.6153846153846, Blast_Score=65, Evalue=4e-12,
Organism=Caenorhabditis elegans, GI17539532, Length=308, Percent_Identity=56.4935064935065, Blast_Score=378, Evalue=1e-105,
Organism=Caenorhabditis elegans, GI71982035, Length=336, Percent_Identity=25.5952380952381, Blast_Score=83, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI71982038, Length=338, Percent_Identity=25.4437869822485, Blast_Score=81, Evalue=5e-16,
Organism=Caenorhabditis elegans, GI17568069, Length=327, Percent_Identity=25.0764525993884, Blast_Score=80, Evalue=1e-15,
Organism=Caenorhabditis elegans, GI115532424, Length=336, Percent_Identity=26.1904761904762, Blast_Score=75, Evalue=6e-14,
Organism=Saccharomyces cerevisiae, GI6319493, Length=351, Percent_Identity=23.0769230769231, Blast_Score=76, Evalue=6e-15,
Organism=Drosophila melanogaster, GI21356223, Length=307, Percent_Identity=56.6775244299674, Blast_Score=385, Evalue=1e-107,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001509
- InterPro:   IPR016040 [H]

Pfam domain/function: PF01370 Epimerase [H]

EC number: =5.1.3.2 [H]

Molecular weight: Translated: 35157; Mature: 35157

Theoretical pI: Translated: 6.04; Mature: 6.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRILVSGGAGFIGSHLCTRLVNEGHDVICLDNFFTGSKDNIKHLMGNHHFEVVRHDVTY
CCEEEEECCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHCCCCEEEEEECCCC
PYSAEVDEIYNLACPASPIHYQHDPIQTAKTSVMGAINMLGLAMRLDAKILQASTSEVYG
CCCCCHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
DPIIHPQPESYWGNVNPVGYRSCYDEGKRCAETLFMDYYRQNQTRIKIIRIFNTYGPRML
CCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCC
PNDGRVVSNFIIQALNNEDITIYGDGKQTRSFQYIDDLIEGMVRMMDTEDDFTGPINIGN
CCCCHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEECCC
PNEFPVLELAERVIRMTGSTSKIVFKPLPTDDPKQRQPDIKLAKEKLGWQPTVELEDGLK
CCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCHHCCCCHHHHHHHCCCCCCEEHHHHHH
RMIEYFKNV
HHHHHHHCC
>Mature Secondary Structure
MKRILVSGGAGFIGSHLCTRLVNEGHDVICLDNFFTGSKDNIKHLMGNHHFEVVRHDVTY
CCEEEEECCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHCCCCEEEEEECCCC
PYSAEVDEIYNLACPASPIHYQHDPIQTAKTSVMGAINMLGLAMRLDAKILQASTSEVYG
CCCCCHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
DPIIHPQPESYWGNVNPVGYRSCYDEGKRCAETLFMDYYRQNQTRIKIIRIFNTYGPRML
CCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCC
PNDGRVVSNFIIQALNNEDITIYGDGKQTRSFQYIDDLIEGMVRMMDTEDDFTGPINIGN
CCCCHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEECCC
PNEFPVLELAERVIRMTGSTSKIVFKPLPTDDPKQRQPDIKLAKEKLGWQPTVELEDGLK
CCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCHHCCCCHHHHHHHCCCCCCEEHHHHHH
RMIEYFKNV
HHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]