Definition Tropheryma whipplei TW08/27, complete genome.
Accession NC_004551
Length 925,938

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The map label for this gene is 28572408

Identifier: 28572408

GI number: 28572408

Start: 277348

End: 277875

Strand: Direct

Name: 28572408

Synonym: TW249

Alternate gene names: NA

Gene position: 277348-277875 (Clockwise)

Preceding gene: 28572407

Following gene: 28572409

Centisome position: 29.95

GC content: 53.6

Gene sequence:

>528_bases
ATGGTTTTGTCTCCCAGCGACATCGTGAACAAGAGGTTCGGGGTGACCAAGTTCAGGGAGGGATATGACCAGGATGAGGT
TGATGATTATCTCGATGAGGTTGCTGTCGATCTTCGTCATTTGCTTGAGAGAAATGACGAACTATCGTCTGAGCTGGAGA
GTGCCAGGGGGCAAATCCAAGCCCTAAAGGATGAGCTGGCCGAGGCTTCTCGCGGTGCCTCTGGTGGCTCGTTTGGTGAT
CAGGCTGCAGAGATTCTTGCTCTCGCAAAGCGTGCCCGTGATGAGTATATACAGGAGGGTGTTAAGAGGCGGGATGCTAT
TGTTGCCGAGGCCCGTGAATCCGCTGAACGTGCTGCTCGCACATCTGAGAGTGAACTCACCAGGCGGGTTGAGGCTCTCA
AACTCGAGATACCTGCCCTCGAGAAGCGTGTTCTTGATTTGCGTGCTTTCGAGAGTGACTATAGGGACAGGTTGCGTGCT
TTTTTGCAGAGCGGGCTGCGTGACCTAGAGCCTAAGAACCCCTCTTGA

Upstream 100 bases:

>100_bases
CAAGAAGGAGGAGTAAACTTCTCTATTCTGGTTTTTTGAGCAGTTCTTGTTTTGGTATACTGGCTCGGAAGATCAGAAGT
TTTTGAGGATCGGGCTCCAC

Downstream 100 bases:

>100_bases
CGACTAGAACCCTGCGGTTCTACGCTCTGGTGGGTTTTTTAGTTTTTCTGGATCAGGTTACCAAGTATCTTGCGCATGCT
TATCTTGCGCGCGATTTTAT

Product: cell division protein

Products: NA

Alternate protein names: DivIVA Protein; DivIVA Domain Protein; Initiation Protein; Protein DivIVA-Like Protein; Protein DivIVA Family; Antigen

Number of amino acids: Translated: 175; Mature: 175

Protein sequence:

>175_residues
MVLSPSDIVNKRFGVTKFREGYDQDEVDDYLDEVAVDLRHLLERNDELSSELESARGQIQALKDELAEASRGASGGSFGD
QAAEILALAKRARDEYIQEGVKRRDAIVAEARESAERAARTSESELTRRVEALKLEIPALEKRVLDLRAFESDYRDRLRA
FLQSGLRDLEPKNPS

Sequences:

>Translated_175_residues
MVLSPSDIVNKRFGVTKFREGYDQDEVDDYLDEVAVDLRHLLERNDELSSELESARGQIQALKDELAEASRGASGGSFGD
QAAEILALAKRARDEYIQEGVKRRDAIVAEARESAERAARTSESELTRRVEALKLEIPALEKRVLDLRAFESDYRDRLRA
FLQSGLRDLEPKNPS
>Mature_175_residues
MVLSPSDIVNKRFGVTKFREGYDQDEVDDYLDEVAVDLRHLLERNDELSSELESARGQIQALKDELAEASRGASGGSFGD
QAAEILALAKRARDEYIQEGVKRRDAIVAEARESAERAARTSESELTRRVEALKLEIPALEKRVLDLRAFESDYRDRLRA
FLQSGLRDLEPKNPS

Specific function: Unknown

COG id: COG3599

COG function: function code D; Cell division initiation protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19737; Mature: 19737

Theoretical pI: Translated: 4.60; Mature: 4.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
0.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
0.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVLSPSDIVNKRFGVTKFREGYDQDEVDDYLDEVAVDLRHLLERNDELSSELESARGQIQ
CCCCCHHHHHHHHCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
ALKDELAEASRGASGGSFGDQAAEILALAKRARDEYIQEGVKRRDAIVAEARESAERAAR
HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TSESELTRRVEALKLEIPALEKRVLDLRAFESDYRDRLRAFLQSGLRDLEPKNPS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MVLSPSDIVNKRFGVTKFREGYDQDEVDDYLDEVAVDLRHLLERNDELSSELESARGQIQ
CCCCCHHHHHHHHCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
ALKDELAEASRGASGGSFGDQAAEILALAKRARDEYIQEGVKRRDAIVAEARESAERAAR
HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TSESELTRRVEALKLEIPALEKRVLDLRAFESDYRDRLRAFLQSGLRDLEPKNPS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA