Definition Lactobacillus plantarum WCFS1, complete genome.
Accession NC_004567
Length 3,308,274

Click here to switch to the map view.

The map label for this gene is tagB2 [H]

Identifier: 28378487

GI number: 28378487

Start: 1645367

End: 1647265

Strand: Direct

Name: tagB2 [H]

Synonym: lp_1819

Alternate gene names: 28378487

Gene position: 1645367-1647265 (Clockwise)

Preceding gene: 28378486

Following gene: 28378488

Centisome position: 49.73

GC content: 41.55

Gene sequence:

>1899_bases
ATGATACAACGACTAAAACGAATCGCGCGTCGCATCGTATACGGACGGAATCAACCGCAATATACTCGTAATCGTGAACT
GGTTGAGGACGCACAAACGACCAAGGAAGACGTTGATTTTCTAAATACATTGCGAATTGAGAAAGATGCCGAATCATTGA
TCAAACGTCAAGTGACTAAGCTGGAATTCAACAGTTCTTACTTAGTGATTGAGGGAATGGCGTGGTTTGAAAAGTATCCC
GAACAAGATACTGAACGAATTATTAAAAGCTTAATTTTGACTAGCAAGACGAATGAAGAATTAGAAATTCCGTTGATCAA
CGTTCGTGGTCAAAACGCTGATTTTCCATATGCCGGGTATCATGGTGACATCAACTTTTCGACACTCAGTGAGGGTAAAC
CGCTAACGCCAGGCACTTATGAAATCAAGATACAATTAAAACAGTATCTAGGTAATGGTTGGATTATCAGACGAACCTCC
ATTGGTCAAGTGGTGGAAACACAGCAAGACTTAAATTATACGACTAAAATGACAAGCTATTCAGCGAAAAGCAATAAGTC
ATACAGTCTAATTTTTCGGTATAATTTAGCCGCCCAAGCCTTAAAGGTCACTTCATATAAACTGAGTGATGTCAACCCGC
TTGAAAATGAGTTTACTGAAGATGTCGGGTTAGATAGTGTAGCGATGCGTGCCATTAAACGCCGGGCGCTAAAACTCTGG
TATCGGTGGTACTGCCTTCAACCGATTCATAAGAAACAAATTTCATTTGTTTCCGATAGTCGGGTGACAATCTCCGGTAA
TTTCGAGTTTATCTACCAGGAATTAAAACGTCGCAATACTGATTTTAAGATTTCATTCTATTTGAAGCCAAGTATTAAAA
CCAAAAAATCCTGGAAAGAGGTTCGAACGTTGGCTAAAGCGTTGGCTACTAGTCGCTATGTGATTTTAGATGACTTTTAC
CCACTAGTTTACCCATTGCATATCCGGGAAAATGCGGATTTGATTCAGGTATGGCATGCGGTCGGTGCCTTTAAAACATT
TGGTTACAGCCGGTTGGGGATGCCTGGTGGTCCTAAGGTTCAATCGTTAAATCATCGCAATTACACCAAAGCCTTGGTTT
CTTCGCATAACATCGCGGATAAATACGCGGAAGGATTTGGAATTGCGCCGGATAAGATTCAGCCGCTAGGAATTCCGCGG
ACGGATATCTTTTTCGATGAGCCCAAGAAACAGGCAATCCGGGAACGGCTCGCGCAAGATTTGCCATTCATCAAGGGCAA
AAAAGTCATTCTCTTTGCCCCAACATTTCGTGGCAATGGTCAGCAATCAGCATACTATCCCTTTGAAATGTTGAATTTTA
GAGCAATCTACGAAGCGTTACACGAAGATTACGTCTTTTTACTGAAGATTCATCCGTTTGTGCAAAACAAACCAACGTTA
CCATATGAATATTCGGACTTCTATTACGATGTTTCTGATTATCGTGAGATCAACGATTTATTACTCGTTGCTGACCAATT
AATCACTGACTACTCATCAGTTTGTTTCGAATACGCACTACTGAACCGGCCAATGATTTTCTTTGCGCCGGACTTAGCGG
ATTACATGCAATCCCGGAGCTTTTACTTCAACTACTTTGATTTTATTCCTGGTAGTTTAGCGGAAAACACGGGTGAGTTG
ATCAACCAGTTGCAACATCCACAAGTTGACCAAGCTAAATTGGACGGCTTTGTGAACTTCTTCTTTGATGATCTAGATGG
TAAGTCGACAGCTCGTTTCGTGGATGCGCTTGAAAATGACTTCGAGGATCCGAACGCAGCTGAGTTAGAAAATAACGACG
GTCTCGCCATTAGTGAAGATGGTAAGATTATCCCTGATTGGGGTAAAAAGGCTAAATAA

Upstream 100 bases:

>100_bases
TGTACATGAATTAAAGCAAAAGACATTTCCACATCAAGATGGGCATAATACCGAACGGGTCGTTCAATTTGTTGAAAAAT
TAGCAGGGGGAGAACATTAG

Downstream 100 bases:

>100_bases
TATGTTAAGATAAAGCAGTCAGTCACATCATTAGCGCATTTACAGCGTTGATTGTGTGACCGACTGTTTTTGCTAGGAAA
CTATAGGAGGAATTGATCAT

Product: teichoic acid biosynthesis protein

Products: NA

Alternate protein names: Polyribitol phosphate polymerase [H]

Number of amino acids: Translated: 632; Mature: 632

Protein sequence:

>632_residues
MIQRLKRIARRIVYGRNQPQYTRNRELVEDAQTTKEDVDFLNTLRIEKDAESLIKRQVTKLEFNSSYLVIEGMAWFEKYP
EQDTERIIKSLILTSKTNEELEIPLINVRGQNADFPYAGYHGDINFSTLSEGKPLTPGTYEIKIQLKQYLGNGWIIRRTS
IGQVVETQQDLNYTTKMTSYSAKSNKSYSLIFRYNLAAQALKVTSYKLSDVNPLENEFTEDVGLDSVAMRAIKRRALKLW
YRWYCLQPIHKKQISFVSDSRVTISGNFEFIYQELKRRNTDFKISFYLKPSIKTKKSWKEVRTLAKALATSRYVILDDFY
PLVYPLHIRENADLIQVWHAVGAFKTFGYSRLGMPGGPKVQSLNHRNYTKALVSSHNIADKYAEGFGIAPDKIQPLGIPR
TDIFFDEPKKQAIRERLAQDLPFIKGKKVILFAPTFRGNGQQSAYYPFEMLNFRAIYEALHEDYVFLLKIHPFVQNKPTL
PYEYSDFYYDVSDYREINDLLLVADQLITDYSSVCFEYALLNRPMIFFAPDLADYMQSRSFYFNYFDFIPGSLAENTGEL
INQLQHPQVDQAKLDGFVNFFFDDLDGKSTARFVDALENDFEDPNAAELENNDGLAISEDGKIIPDWGKKAK

Sequences:

>Translated_632_residues
MIQRLKRIARRIVYGRNQPQYTRNRELVEDAQTTKEDVDFLNTLRIEKDAESLIKRQVTKLEFNSSYLVIEGMAWFEKYP
EQDTERIIKSLILTSKTNEELEIPLINVRGQNADFPYAGYHGDINFSTLSEGKPLTPGTYEIKIQLKQYLGNGWIIRRTS
IGQVVETQQDLNYTTKMTSYSAKSNKSYSLIFRYNLAAQALKVTSYKLSDVNPLENEFTEDVGLDSVAMRAIKRRALKLW
YRWYCLQPIHKKQISFVSDSRVTISGNFEFIYQELKRRNTDFKISFYLKPSIKTKKSWKEVRTLAKALATSRYVILDDFY
PLVYPLHIRENADLIQVWHAVGAFKTFGYSRLGMPGGPKVQSLNHRNYTKALVSSHNIADKYAEGFGIAPDKIQPLGIPR
TDIFFDEPKKQAIRERLAQDLPFIKGKKVILFAPTFRGNGQQSAYYPFEMLNFRAIYEALHEDYVFLLKIHPFVQNKPTL
PYEYSDFYYDVSDYREINDLLLVADQLITDYSSVCFEYALLNRPMIFFAPDLADYMQSRSFYFNYFDFIPGSLAENTGEL
INQLQHPQVDQAKLDGFVNFFFDDLDGKSTARFVDALENDFEDPNAAELENNDGLAISEDGKIIPDWGKKAK
>Mature_632_residues
MIQRLKRIARRIVYGRNQPQYTRNRELVEDAQTTKEDVDFLNTLRIEKDAESLIKRQVTKLEFNSSYLVIEGMAWFEKYP
EQDTERIIKSLILTSKTNEELEIPLINVRGQNADFPYAGYHGDINFSTLSEGKPLTPGTYEIKIQLKQYLGNGWIIRRTS
IGQVVETQQDLNYTTKMTSYSAKSNKSYSLIFRYNLAAQALKVTSYKLSDVNPLENEFTEDVGLDSVAMRAIKRRALKLW
YRWYCLQPIHKKQISFVSDSRVTISGNFEFIYQELKRRNTDFKISFYLKPSIKTKKSWKEVRTLAKALATSRYVILDDFY
PLVYPLHIRENADLIQVWHAVGAFKTFGYSRLGMPGGPKVQSLNHRNYTKALVSSHNIADKYAEGFGIAPDKIQPLGIPR
TDIFFDEPKKQAIRERLAQDLPFIKGKKVILFAPTFRGNGQQSAYYPFEMLNFRAIYEALHEDYVFLLKIHPFVQNKPTL
PYEYSDFYYDVSDYREINDLLLVADQLITDYSSVCFEYALLNRPMIFFAPDLADYMQSRSFYFNYFDFIPGSLAENTGEL
INQLQHPQVDQAKLDGFVNFFFDDLDGKSTARFVDALENDFEDPNAAELENNDGLAISEDGKIIPDWGKKAK

Specific function: Is responsible for the polymerization of the ribitol-P chain during poly(ribitol phosphate)teichoic acid synthesis (Potential) [H]

COG id: COG1887

COG function: function code M; Putative glycosyl/glycerophosphate transferases involved in teichoic acid biosynthesis TagF/TagB/EpsJ/RodC

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CDP-glycerol glycerophosphotransferase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007554 [H]

Pfam domain/function: PF04464 Glyphos_transf [H]

EC number: =2.7.8.14 [H]

Molecular weight: Translated: 73285; Mature: 73285

Theoretical pI: Translated: 7.69; Mature: 7.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIQRLKRIARRIVYGRNQPQYTRNRELVEDAQTTKEDVDFLNTLRIEKDAESLIKRQVTK
CHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
LEFNSSYLVIEGMAWFEKYPEQDTERIIKSLILTSKTNEELEIPLINVRGQNADFPYAGY
EEECCCEEEEECCHHHHHCCCHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCCCCCC
HGDINFSTLSEGKPLTPGTYEIKIQLKQYLGNGWIIRRTSIGQVVETQQDLNYTTKMTSY
CCCCCEEECCCCCCCCCCEEEEEEEEHHHHCCCEEEEECCCHHHHHHHHHCCCCCEEEEC
SAKSNKSYSLIFRYNLAAQALKVTSYKLSDVNPLENEFTEDVGLDSVAMRAIKRRALKLW
CCCCCCCEEEEEEECHHHHHHHHEEEECCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHH
YRWYCLQPIHKKQISFVSDSRVTISGNFEFIYQELKRRNTDFKISFYLKPSIKTKKSWKE
HHHHHHCHHHHHHHHEECCCEEEEECCHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHH
VRTLAKALATSRYVILDDFYPLVYPLHIRENADLIQVWHAVGAFKTFGYSRLGMPGGPKV
HHHHHHHHHCCCEEEEECCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCC
QSLNHRNYTKALVSSHNIADKYAEGFGIAPDKIQPLGIPRTDIFFDEPKKQAIRERLAQD
CCCCCCHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
LPFIKGKKVILFAPTFRGNGQQSAYYPFEMLNFRAIYEALHEDYVFLLKIHPFVQNKPTL
CCCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCEEEEEEEEHHHCCCCCC
PYEYSDFYYDVSDYREINDLLLVADQLITDYSSVCFEYALLNRPMIFFAPDLADYMQSRS
CEECCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHCCC
FYFNYFDFIPGSLAENTGELINQLQHPQVDQAKLDGFVNFFFDDLDGKSTARFVDALEND
EEEEHHHCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHC
FEDPNAAELENNDGLAISEDGKIIPDWGKKAK
CCCCCCCCCCCCCCEEECCCCCCCCCCCCCCC
>Mature Secondary Structure
MIQRLKRIARRIVYGRNQPQYTRNRELVEDAQTTKEDVDFLNTLRIEKDAESLIKRQVTK
CHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
LEFNSSYLVIEGMAWFEKYPEQDTERIIKSLILTSKTNEELEIPLINVRGQNADFPYAGY
EEECCCEEEEECCHHHHHCCCHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCCCCCC
HGDINFSTLSEGKPLTPGTYEIKIQLKQYLGNGWIIRRTSIGQVVETQQDLNYTTKMTSY
CCCCCEEECCCCCCCCCCEEEEEEEEHHHHCCCEEEEECCCHHHHHHHHHCCCCCEEEEC
SAKSNKSYSLIFRYNLAAQALKVTSYKLSDVNPLENEFTEDVGLDSVAMRAIKRRALKLW
CCCCCCCEEEEEEECHHHHHHHHEEEECCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHH
YRWYCLQPIHKKQISFVSDSRVTISGNFEFIYQELKRRNTDFKISFYLKPSIKTKKSWKE
HHHHHHCHHHHHHHHEECCCEEEEECCHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHH
VRTLAKALATSRYVILDDFYPLVYPLHIRENADLIQVWHAVGAFKTFGYSRLGMPGGPKV
HHHHHHHHHCCCEEEEECCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCC
QSLNHRNYTKALVSSHNIADKYAEGFGIAPDKIQPLGIPRTDIFFDEPKKQAIRERLAQD
CCCCCCHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
LPFIKGKKVILFAPTFRGNGQQSAYYPFEMLNFRAIYEALHEDYVFLLKIHPFVQNKPTL
CCCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCEEEEEEEEHHHCCCCCC
PYEYSDFYYDVSDYREINDLLLVADQLITDYSSVCFEYALLNRPMIFFAPDLADYMQSRS
CEECCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHCCC
FYFNYFDFIPGSLAENTGELINQLQHPQVDQAKLDGFVNFFFDDLDGKSTARFVDALEND
EEEEHHHCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHC
FEDPNAAELENNDGLAISEDGKIIPDWGKKAK
CCCCCCCCCCCCCCEEECCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11882717 [H]