Definition Xylella fastidiosa Temecula1, complete genome.
Accession NC_004556
Length 2,519,802

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The map label for this gene is 28199203

Identifier: 28199203

GI number: 28199203

Start: 1544794

End: 1545747

Strand: Reverse

Name: 28199203

Synonym: PD1317

Alternate gene names: NA

Gene position: 1545747-1544794 (Counterclockwise)

Preceding gene: 28199204

Following gene: 28199202

Centisome position: 61.34

GC content: 51.36

Gene sequence:

>954_bases
ATGAAAGCGTTAAATAAAATTCGATATGCGTTTTTAGTGTGTACGCTGATGGTCCTGGTGACATTAGCTGGATGCAACTC
GGCAGATCGTTCTGCTGAACCGCCCCAGTCGTCCCACCAAGGGTCGGAACAAGAAGGTGCTAAAAAAACTCCTTTGAATG
TTGAAGTTTTTAACCTGGGCGAGCGTTCGATGTTTGCAGTCTCCTCTGTATTGGTGACAGGGACTGCGGATGCTATTTTG
ATTGATACGCAGTTTTCTGCGGCTGATGCACGTCAGCTTGTAGACAAAATAAAAGCATCTGGCAAGCGTCTGAAGGCTAT
CTATATCAGTCATGGTGACCCTGATTATTACTTTGGTCTGGATAGTGTGCACGCTGCCTTCCCTGAGGCGAAGGTGTTCG
CTACTCCGCAAACTATCGCGCATATCCAGGCCACCAAAGATGCGAAACTGAAGCTCTGGGCGCCACAGCTGGGACAGGAT
GCACCGAAACAAATCTTGATTCCAGAACCAATGCAAGGAGACCAGCTGGTACTGGAAGGTCAGGAATTGAGGATTATTGG
TATGGATGGTCCGACGCCTGACCGTACTTTCGTGTGGATTCCCTCAAGCAGAACAGTTGCTGGCGGTATCTCGGTGATGG
GGGCTCAGCATGTATGGATGGCTGACACACAGACCCCACAGTCCCACATGGAGTGGTTGGCTGTGCTGGATCGGATCAAA
TCAATGGATCCGAAGGTAGTGGTTCCAGGACATTTTTTGCCTGGCGCGTCGCTGGACGTGCGCTCGGTGACGTTCACTGC
CGATTATATTCGTGCCTTTGACGAGGAAACCGTCAAGGCCAAGGATTCGGCTGCGTTGATCGCGGCGATGAAGCAACGTT
ATCCCGGACTTGGTGGAGAGGGATCGCTCGAACTCAGTGCCAAGGTGGCCAAGGGCGAGATGGAATGGAAGTGA

Upstream 100 bases:

>100_bases
CGTGATTTCGTTAATCAGGGCGAAAGTATTGAATTATTATCAATAAAGAGAGTGCATTTTTATTTTATTTCAAAAATATT
GAAAAGTAGGAGAGCTTGAA

Downstream 100 bases:

>100_bases
TGTGATGGGCGACTATGCTCACGTTTCTATCCTTATTCCTACACGGCGTGGTGCTTCTTTGTGATAAATGCATCTATTTT
CTATTGCGGAGTGTCGCTCT

Product: hypothetical protein

Products: NA

Alternate protein names: Metallo-Beta-Lactamase Superfamily Protein; Metallo-Beta-Lactamase Family Protein; Zn-Dependent Hydrolase; Beta-Lactamase Domain Protein; Beta-Lactamase-Like; Zn-Dependent Hydrolase Including Glyoxylase; Metallo-Beta-Lactamase; Beta-Lactamase Class B; Twin-Arginine Translocation Pathway Signal; Beta-Lactamase Family Protein; Metallo-Beta-Lactamase Protein; Signal Peptide; Beta-Lactamase-Like Protein; Beta-Lactamase; Exported Metallo-Beta-Lactamase Superfamily Protein; Hydrolase

Number of amino acids: Translated: 317; Mature: 317

Protein sequence:

>317_residues
MKALNKIRYAFLVCTLMVLVTLAGCNSADRSAEPPQSSHQGSEQEGAKKTPLNVEVFNLGERSMFAVSSVLVTGTADAIL
IDTQFSAADARQLVDKIKASGKRLKAIYISHGDPDYYFGLDSVHAAFPEAKVFATPQTIAHIQATKDAKLKLWAPQLGQD
APKQILIPEPMQGDQLVLEGQELRIIGMDGPTPDRTFVWIPSSRTVAGGISVMGAQHVWMADTQTPQSHMEWLAVLDRIK
SMDPKVVVPGHFLPGASLDVRSVTFTADYIRAFDEETVKAKDSAALIAAMKQRYPGLGGEGSLELSAKVAKGEMEWK

Sequences:

>Translated_317_residues
MKALNKIRYAFLVCTLMVLVTLAGCNSADRSAEPPQSSHQGSEQEGAKKTPLNVEVFNLGERSMFAVSSVLVTGTADAIL
IDTQFSAADARQLVDKIKASGKRLKAIYISHGDPDYYFGLDSVHAAFPEAKVFATPQTIAHIQATKDAKLKLWAPQLGQD
APKQILIPEPMQGDQLVLEGQELRIIGMDGPTPDRTFVWIPSSRTVAGGISVMGAQHVWMADTQTPQSHMEWLAVLDRIK
SMDPKVVVPGHFLPGASLDVRSVTFTADYIRAFDEETVKAKDSAALIAAMKQRYPGLGGEGSLELSAKVAKGEMEWK
>Mature_317_residues
MKALNKIRYAFLVCTLMVLVTLAGCNSADRSAEPPQSSHQGSEQEGAKKTPLNVEVFNLGERSMFAVSSVLVTGTADAIL
IDTQFSAADARQLVDKIKASGKRLKAIYISHGDPDYYFGLDSVHAAFPEAKVFATPQTIAHIQATKDAKLKLWAPQLGQD
APKQILIPEPMQGDQLVLEGQELRIIGMDGPTPDRTFVWIPSSRTVAGGISVMGAQHVWMADTQTPQSHMEWLAVLDRIK
SMDPKVVVPGHFLPGASLDVRSVTFTADYIRAFDEETVKAKDSAALIAAMKQRYPGLGGEGSLELSAKVAKGEMEWK

Specific function: Unknown

COG id: COG0491

COG function: function code R; Zn-dependent hydrolases, including glyoxylases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34408; Mature: 34408

Theoretical pI: Translated: 6.64; Mature: 6.64

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKALNKIRYAFLVCTLMVLVTLAGCNSADRSAEPPQSSHQGSEQEGAKKTPLNVEVFNLG
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECC
ERSMFAVSSVLVTGTADAILIDTQFSAADARQLVDKIKASGKRLKAIYISHGDPDYYFGL
CHHHHHHHHHHEECCCCEEEEECCCCHHHHHHHHHHHHCCCCEEEEEEEECCCCCEEECC
DSVHAAFPEAKVFATPQTIAHIQATKDAKLKLWAPQLGQDAPKQILIPEPMQGDQLVLEG
HHHHHCCCCCEEEECCHHHEEEEECCCCEEEEECCCCCCCCCCEEECCCCCCCCEEEEEC
QELRIIGMDGPTPDRTFVWIPSSRTVAGGISVMGAQHVWMADTQTPQSHMEWLAVLDRIK
CEEEEEECCCCCCCCEEEEECCCCEEECCEEEECCCEEEEECCCCHHHHHHHHHHHHHHH
SMDPKVVVPGHFLPGASLDVRSVTFTADYIRAFDEETVKAKDSAALIAAMKQRYPGLGGE
CCCCCEEECCCCCCCCCCEEEEEEEEHHHHHHHCHHHHHCCCHHHHHHHHHHHCCCCCCC
GSLELSAKVAKGEMEWK
CCEEEEEEEECCCCCCC
>Mature Secondary Structure
MKALNKIRYAFLVCTLMVLVTLAGCNSADRSAEPPQSSHQGSEQEGAKKTPLNVEVFNLG
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECC
ERSMFAVSSVLVTGTADAILIDTQFSAADARQLVDKIKASGKRLKAIYISHGDPDYYFGL
CHHHHHHHHHHEECCCCEEEEECCCCHHHHHHHHHHHHCCCCEEEEEEEECCCCCEEECC
DSVHAAFPEAKVFATPQTIAHIQATKDAKLKLWAPQLGQDAPKQILIPEPMQGDQLVLEG
HHHHHCCCCCEEEECCHHHEEEEECCCCEEEEECCCCCCCCCCEEECCCCCCCCEEEEEC
QELRIIGMDGPTPDRTFVWIPSSRTVAGGISVMGAQHVWMADTQTPQSHMEWLAVLDRIK
CEEEEEECCCCCCCCEEEEECCCCEEECCEEEECCCEEEEECCCCHHHHHHHHHHHHHHH
SMDPKVVVPGHFLPGASLDVRSVTFTADYIRAFDEETVKAKDSAALIAAMKQRYPGLGGE
CCCCCEEECCCCCCCCCCEEEEEEEEHHHHHHHCHHHHHCCCHHHHHHHHHHHCCCCCCC
GSLELSAKVAKGEMEWK
CCEEEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA