Definition | Xylella fastidiosa Temecula1, complete genome. |
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Accession | NC_004556 |
Length | 2,519,802 |
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The map label for this gene is parA [C]
Identifier: 28199202
GI number: 28199202
Start: 1543701
End: 1544495
Strand: Reverse
Name: parA [C]
Synonym: PD1316
Alternate gene names: 28199202
Gene position: 1544495-1543701 (Counterclockwise)
Preceding gene: 28199203
Following gene: 28199201
Centisome position: 61.29
GC content: 53.84
Gene sequence:
>795_bases ATGGCCAGGATCATCGCCATTGCCAATCAAAAAGGTGGTGTCGGTAAGACCACTACAGCGGTTAATCTGGCGGCAGGCTT GGTGCGTGCATCCGAGCGAGTCCTGTTGGTGGATCTTGATTCGCAGGGCAATGCGACGATGGGCAGCGGCGTGGATAAGA ACGGGTTGATCTCGTCTACCTGTGAGGTTCTGTTGGGTGAAAGGAGTGTTGCTGAGAGTCGGGCCAGGGCGCCGGAAGGT TTCGATTTGCTGCCAGGCAACATTGATTTGACTGCAGCGGCCATCCAGTTAATGGAGCAAAGCGAGCGTGAGCAGCGATT GAAGCGTGCGCTGTCACCGATTCGCCGTGAGTACGATTTCATCTTGATTGACTGTCCGCCGGCGCTGTCGCTGCTGACCG TGAATGCCCTCACCGCAGCGGATTCGGTGATTGTGCCGATGCAGTGCGAGTATTACGCGCTGGAGGGGTTGAGTGCGTTG CTTGAAACGATTGAGGCGCTGCGTGTCAATCTGAATCCGCGACTGGAGATTGAGGGTGTACTGCGTACGATGTTTGATAT CCGCAATAATCTGGCCAATGCAGTGTCGACGGAGTTAACAGAGCACTTCGGTGACAAAGTGTTCCGGACGATTGTGCCGC GTAATGTGCGTTTGGCTGAAGCTCCAAGTTACGGTAAGAGCATCGTTGGTTATGACGGCGCCTCGCGTGGTAGCGTAGCT TATTTGGGCTTGGCCAATGAAGTGATTCTCCGTCAAAAAGACCGCAAAAAAGCCAACGTTGTGGAGATTAATTAA
Upstream 100 bases:
>100_bases GAAATGCGCTGTTGTCTGGTAGAAGCGGTATCAGAATTTTCCTGATTGACCTCGTAGACCGCATAATGCTCGGATGACCC CTTTCATCAAAACTCCTTCT
Downstream 100 bases:
>100_bases TGAATAAACCCAGCCTCCCCCTCAAGAAGCGCGGCCTGGGTCGTGGTCTTGAAGCCTTGCTTGGGTCTAAGGGTGGATCT TCTGTCCCACCAACAGTTGC
Product: chromosome partitioning protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 264; Mature: 263
Protein sequence:
>264_residues MARIIAIANQKGGVGKTTTAVNLAAGLVRASERVLLVDLDSQGNATMGSGVDKNGLISSTCEVLLGERSVAESRARAPEG FDLLPGNIDLTAAAIQLMEQSEREQRLKRALSPIRREYDFILIDCPPALSLLTVNALTAADSVIVPMQCEYYALEGLSAL LETIEALRVNLNPRLEIEGVLRTMFDIRNNLANAVSTELTEHFGDKVFRTIVPRNVRLAEAPSYGKSIVGYDGASRGSVA YLGLANEVILRQKDRKKANVVEIN
Sequences:
>Translated_264_residues MARIIAIANQKGGVGKTTTAVNLAAGLVRASERVLLVDLDSQGNATMGSGVDKNGLISSTCEVLLGERSVAESRARAPEG FDLLPGNIDLTAAAIQLMEQSEREQRLKRALSPIRREYDFILIDCPPALSLLTVNALTAADSVIVPMQCEYYALEGLSAL LETIEALRVNLNPRLEIEGVLRTMFDIRNNLANAVSTELTEHFGDKVFRTIVPRNVRLAEAPSYGKSIVGYDGASRGSVA YLGLANEVILRQKDRKKANVVEIN >Mature_263_residues ARIIAIANQKGGVGKTTTAVNLAAGLVRASERVLLVDLDSQGNATMGSGVDKNGLISSTCEVLLGERSVAESRARAPEGF DLLPGNIDLTAAAIQLMEQSEREQRLKRALSPIRREYDFILIDCPPALSLLTVNALTAADSVIVPMQCEYYALEGLSALL ETIEALRVNLNPRLEIEGVLRTMFDIRNNLANAVSTELTEHFGDKVFRTIVPRNVRLAEAPSYGKSIVGYDGASRGSVAY LGLANEVILRQKDRKKANVVEIN
Specific function: This Protein Is Essential For Plasmid Partition. It Ensures The Proper Distribution Of Newly Replicated Plasmids To Daughter Cells During Cell Division. Sopa Is Trans-Acting. [C]
COG id: COG1192
COG function: function code D; ATPases involved in chromosome partitioning
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: To B.subtilis soj [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002586 [H]
Pfam domain/function: PF01656 CbiA [H]
EC number: NA
Molecular weight: Translated: 28565; Mature: 28434
Theoretical pI: Translated: 5.49; Mature: 5.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARIIAIANQKGGVGKTTTAVNLAAGLVRASERVLLVDLDSQGNATMGSGVDKNGLISST CCEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCHHHH CEVLLGERSVAESRARAPEGFDLLPGNIDLTAAAIQLMEQSEREQRLKRALSPIRREYDF HHHHHCCHHHHHHHHCCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCE ILIDCPPALSLLTVNALTAADSVIVPMQCEYYALEGLSALLETIEALRVNLNPRLEIEGV EEEECCCCHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHH LRTMFDIRNNLANAVSTELTEHFGDKVFRTIVPRNVRLAEAPSYGKSIVGYDGASRGSVA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCEEECCCCCCCCCEE YLGLANEVILRQKDRKKANVVEIN EEECHHHHHHHCCCCCCCCEEEEC >Mature Secondary Structure ARIIAIANQKGGVGKTTTAVNLAAGLVRASERVLLVDLDSQGNATMGSGVDKNGLISST CEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCHHHH CEVLLGERSVAESRARAPEGFDLLPGNIDLTAAAIQLMEQSEREQRLKRALSPIRREYDF HHHHHCCHHHHHHHHCCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCE ILIDCPPALSLLTVNALTAADSVIVPMQCEYYALEGLSALLETIEALRVNLNPRLEIEGV EEEECCCCHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHH LRTMFDIRNNLANAVSTELTEHFGDKVFRTIVPRNVRLAEAPSYGKSIVGYDGASRGSVA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCEEECCCCCCCCCEE YLGLANEVILRQKDRKKANVVEIN EEECHHHHHHHCCCCCCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12534463 [H]