Definition Edwardsiella ictaluri 93-146 chromosome, complete genome.
Accession NC_012779
Length 3,812,315

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The map label for this gene is 238921547

Identifier: 238921547

GI number: 238921547

Start: 3586629

End: 3587585

Strand: Reverse

Name: 238921547

Synonym: NT01EI_3699

Alternate gene names: NA

Gene position: 3587585-3586629 (Counterclockwise)

Preceding gene: 238921548

Following gene: 238921546

Centisome position: 94.11

GC content: 65.31

Gene sequence:

>957_bases
GTGGCTACGCTGCTGCTGACCGCCGTCGGCGTCTTTGTCGATGTGGCGGTGATCACCGTGTCGCCGATTGCCCTGGCTAT
CGCTCACCGGGCCGACATCTCTAAAATGGCCATTCTGCTGGCGATGGTCGGCGGTGGTAAGGCGGGAAATGTCATGTCGC
CAAACCCCAACACCATCGCCGCAGCGGAGGCGTTCAACGTGCCGCTGACCTCCCTGATGTTGGCCGGTATCGTGCCCGGA
CTGTTCGGCCTGGCTCTGGCTTACCTGCTGGCGCGGCGCCTGCGCGGGCACGGGAGTAAGGTTCAGGCCCATGAGCTGGT
GGCCGCCGATCACGCCAGCCAGCCCGGCTTTATGGCCGCGCTGACCGCGCCGCTGGTGGCCATTGTGCTGCTGGCCCTGC
GCCCCGTCGCGGGCATCGCCATCGATCCCCTGCTGGCCTTGCCGCTGGGGGGGCTGATCGGACTGCTGGCCATGGGGCAG
TGGCGTCACGCCAACCGCTACATGGTCTCCGGGCTATCGCGCATGGCGCCGGTCGCAATTATGCTGCTGGGGACCGGTAC
GCTGGCCGGCATCATCGCTAACTCCGGATTGAAAACGGTGCTGATCGACGGCTTGGGCGTATCCGGTTTGCCCTCTTATC
TGCTGGCGCCGGTCTCCGGCGCGCTGATGTCGATGGCCACCGCGTCTACGACGGCGGGCACCGCCGTGGCCTCCGCCGTC
TTTAGCGCCACCCTGCTGGAGATGGGGATCACGGCGCTGGCCGGGGCGGCGATGATCCATGCCGGTGCGACCGTATTTGA
TCACATGCCGCACGGCAGCTTCTTTCATGCCACCGGCGGCAGCGTCAATATGCAGGTGCATGAGCGCCTGAAGCTGATCC
CTTATGAAACCGCGGTCGGTCTGATGATCGCGCTGATTTCCACGCTGATGTTCGGCGTATTCCACCTGGCGGGTTAA

Upstream 100 bases:

>100_bases
TTCTCGGCGCGGGGTACTGATTGAGTCCGGCGCCGCCAGCGCCATCGCCGAGACGATCGTACGCCGCGTCGGCGAGGGGC
GGGCGCTGCTGGCGCTGGCG

Downstream 100 bases:

>100_bases
CGGAGAAGAGAGAGTATGAAAGTTGTGATCGCCCCCGATTCGTTTAAGGAGAGCCTGAGCGCCATGCAGGTGGCACAGGC
GATTGAGCAGGGGTTTCGTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 318; Mature: 317

Protein sequence:

>318_residues
MATLLLTAVGVFVDVAVITVSPIALAIAHRADISKMAILLAMVGGGKAGNVMSPNPNTIAAAEAFNVPLTSLMLAGIVPG
LFGLALAYLLARRLRGHGSKVQAHELVAADHASQPGFMAALTAPLVAIVLLALRPVAGIAIDPLLALPLGGLIGLLAMGQ
WRHANRYMVSGLSRMAPVAIMLLGTGTLAGIIANSGLKTVLIDGLGVSGLPSYLLAPVSGALMSMATASTTAGTAVASAV
FSATLLEMGITALAGAAMIHAGATVFDHMPHGSFFHATGGSVNMQVHERLKLIPYETAVGLMIALISTLMFGVFHLAG

Sequences:

>Translated_318_residues
MATLLLTAVGVFVDVAVITVSPIALAIAHRADISKMAILLAMVGGGKAGNVMSPNPNTIAAAEAFNVPLTSLMLAGIVPG
LFGLALAYLLARRLRGHGSKVQAHELVAADHASQPGFMAALTAPLVAIVLLALRPVAGIAIDPLLALPLGGLIGLLAMGQ
WRHANRYMVSGLSRMAPVAIMLLGTGTLAGIIANSGLKTVLIDGLGVSGLPSYLLAPVSGALMSMATASTTAGTAVASAV
FSATLLEMGITALAGAAMIHAGATVFDHMPHGSFFHATGGSVNMQVHERLKLIPYETAVGLMIALISTLMFGVFHLAG
>Mature_317_residues
ATLLLTAVGVFVDVAVITVSPIALAIAHRADISKMAILLAMVGGGKAGNVMSPNPNTIAAAEAFNVPLTSLMLAGIVPGL
FGLALAYLLARRLRGHGSKVQAHELVAADHASQPGFMAALTAPLVAIVLLALRPVAGIAIDPLLALPLGGLIGLLAMGQW
RHANRYMVSGLSRMAPVAIMLLGTGTLAGIIANSGLKTVLIDGLGVSGLPSYLLAPVSGALMSMATASTTAGTAVASAVF
SATLLEMGITALAGAAMIHAGATVFDHMPHGSFFHATGGSVNMQVHERLKLIPYETAVGLMIALISTLMFGVFHLAG

Specific function: Unknown

COG id: COG2610

COG function: function code GE; H+/gluconate symporter and related permeases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CitM (TC 2.A.11) transporter family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003474 [H]

Pfam domain/function: PF02447 GntP_permease [H]

EC number: NA

Molecular weight: Translated: 32203; Mature: 32072

Theoretical pI: Translated: 9.88; Mature: 9.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.7 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.4 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATLLLTAVGVFVDVAVITVSPIALAIAHRADISKMAILLAMVGGGKAGNVMSPNPNTIA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEE
AAEAFNVPLTSLMLAGIVPGLFGLALAYLLARRLRGHGSKVQAHELVAADHASQPGFMAA
EHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCHHHH
LTAPLVAIVLLALRPVAGIAIDPLLALPLGGLIGLLAMGQWRHANRYMVSGLSRMAPVAI
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
MLLGTGTLAGIIANSGLKTVLIDGLGVSGLPSYLLAPVSGALMSMATASTTAGTAVASAV
HHHCCCHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
FSATLLEMGITALAGAAMIHAGATVFDHMPHGSFFHATGGSVNMQVHERLKLIPYETAVG
HHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCEEECCCCEEEHHHHHHHHHCCHHHHHH
LMIALISTLMFGVFHLAG
HHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
ATLLLTAVGVFVDVAVITVSPIALAIAHRADISKMAILLAMVGGGKAGNVMSPNPNTIA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEE
AAEAFNVPLTSLMLAGIVPGLFGLALAYLLARRLRGHGSKVQAHELVAADHASQPGFMAA
EHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCHHHH
LTAPLVAIVLLALRPVAGIAIDPLLALPLGGLIGLLAMGQWRHANRYMVSGLSRMAPVAI
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
MLLGTGTLAGIIANSGLKTVLIDGLGVSGLPSYLLAPVSGALMSMATASTTAGTAVASAV
HHHCCCHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
FSATLLEMGITALAGAAMIHAGATVFDHMPHGSFFHATGGSVNMQVHERLKLIPYETAVG
HHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCEEECCCCEEEHHHHHHHHHCCHHHHHH
LMIALISTLMFGVFHLAG
HHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]