Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
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Accession | NC_012779 |
Length | 3,812,315 |
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The map label for this gene is glxK [H]
Identifier: 238921546
GI number: 238921546
Start: 3585477
End: 3586613
Strand: Reverse
Name: glxK [H]
Synonym: NT01EI_3697
Alternate gene names: 238921546
Gene position: 3586613-3585477 (Counterclockwise)
Preceding gene: 238921547
Following gene: 238921544
Centisome position: 94.08
GC content: 67.19
Gene sequence:
>1137_bases ATGAAAGTTGTGATCGCCCCCGATTCGTTTAAGGAGAGCCTGAGCGCCATGCAGGTGGCACAGGCGATTGAGCAGGGGTT TCGTGAGATCTATCCCGATGCCAACTACCTGCTGTTGCCGATGGCGGACGGCGGCGAGGGCACCGTCGATGCCATGGTGG CGGCGACCGGTGGGCAGCGCATCGCACAGACGGTTACCGGCCCGCTTGGGCAGCCTGTGGCGGCCTTTTTTGGCTGGCTG GGCGACGGCGGAACCGCGGTGATCGAGATGGCGGCCGCTTCCGGTTTGCATCTGGTGCCGCCCGGTCAGCGCGACCCGAG CATCACCACCTCCTACGGTACCGGTGAGCTGATCCTGGCGGCGCTCGATCGCGGCGCACGCCGATTGATCCTGGGGATCG GCGGCAGTGCGACCAACGACGGCGGTGCCGGAATGATGCAGGCGCTGGGCGCCAGGCTCAGCGATGCGCAGGGAGAGGCG CTGGCCTATGGCGGCGGCGCCCTGGGTGAGCTGGCACACATCGATCTGACGGGGCTCGATGCCCGGCTGGCGCAAACCGA TATTCTGGTAGCCTGCGATGTCGATAATCCACTGTGCGGCCCGCAGGGGGCATCGGCGGTATTCGGCCCGCAGAAAGGGG CTACGCCGGAGCAGGTGCGTCGTCTGGATACCGCCTTACATCGCTATGGCACGCTGCTGGAGCAGGTCAGCGGCCGATCG GTGCTGAGGGTGGCGGGAAGCGGTGCGGCCGGTGGCATGGGCGCGGCGCTGTGTAGCCTGCTGAATGCCCGTTTGCGTCC CGGCATTGAGATCGTCACCGACGCGCTGGATCTGGCGCAGGCGGTGCAGGGGGCCAGCCTGGTGATCACCGGCGAGGGAC GTATCGACAGCCAGACCGTACACGGCAAGACGCCGATCGGTGTGGCGCGGGTAGCGAAGGCCGCCGGCGTGCCGGTCATC GCATTAGCCGGGGGGATGACGCCCGACTATGGCGTGGTGCATGCCCATGGACTGGACGCAGTATTTTCGGTGCTGTGCCG CGTTTCCCCCCTGGAGGAGGTGCTGGCGCAGGCGCACGATAATCTGCGTGTTACGGCGCGCAACGTTGCGGCGGTCTGGC GCGCCGCGCGCGGTTAA
Upstream 100 bases:
>100_bases GCTGATCCCTTATGAAACCGCGGTCGGTCTGATGATCGCGCTGATTTCCACGCTGATGTTCGGCGTATTCCACCTGGCGG GTTAACGGAGAAGAGAGAGT
Downstream 100 bases:
>100_bases CGGCGCCAGCCCTCCGGCCGGCGGCTGAAGCCGCAGGCGCGCATAAAGCCGTCCATGATGGCGAGCTGCGCTGGCGGAAT ATCGCCAAGCGGCAGCTGCC
Product: glycerate kinase 1
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 378; Mature: 378
Protein sequence:
>378_residues MKVVIAPDSFKESLSAMQVAQAIEQGFREIYPDANYLLLPMADGGEGTVDAMVAATGGQRIAQTVTGPLGQPVAAFFGWL GDGGTAVIEMAAASGLHLVPPGQRDPSITTSYGTGELILAALDRGARRLILGIGGSATNDGGAGMMQALGARLSDAQGEA LAYGGGALGELAHIDLTGLDARLAQTDILVACDVDNPLCGPQGASAVFGPQKGATPEQVRRLDTALHRYGTLLEQVSGRS VLRVAGSGAAGGMGAALCSLLNARLRPGIEIVTDALDLAQAVQGASLVITGEGRIDSQTVHGKTPIGVARVAKAAGVPVI ALAGGMTPDYGVVHAHGLDAVFSVLCRVSPLEEVLAQAHDNLRVTARNVAAVWRAARG
Sequences:
>Translated_378_residues MKVVIAPDSFKESLSAMQVAQAIEQGFREIYPDANYLLLPMADGGEGTVDAMVAATGGQRIAQTVTGPLGQPVAAFFGWL GDGGTAVIEMAAASGLHLVPPGQRDPSITTSYGTGELILAALDRGARRLILGIGGSATNDGGAGMMQALGARLSDAQGEA LAYGGGALGELAHIDLTGLDARLAQTDILVACDVDNPLCGPQGASAVFGPQKGATPEQVRRLDTALHRYGTLLEQVSGRS VLRVAGSGAAGGMGAALCSLLNARLRPGIEIVTDALDLAQAVQGASLVITGEGRIDSQTVHGKTPIGVARVAKAAGVPVI ALAGGMTPDYGVVHAHGLDAVFSVLCRVSPLEEVLAQAHDNLRVTARNVAAVWRAARG >Mature_378_residues MKVVIAPDSFKESLSAMQVAQAIEQGFREIYPDANYLLLPMADGGEGTVDAMVAATGGQRIAQTVTGPLGQPVAAFFGWL GDGGTAVIEMAAASGLHLVPPGQRDPSITTSYGTGELILAALDRGARRLILGIGGSATNDGGAGMMQALGARLSDAQGEA LAYGGGALGELAHIDLTGLDARLAQTDILVACDVDNPLCGPQGASAVFGPQKGATPEQVRRLDTALHRYGTLLEQVSGRS VLRVAGSGAAGGMGAALCSLLNARLRPGIEIVTDALDLAQAVQGASLVITGEGRIDSQTVHGKTPIGVARVAKAAGVPVI ALAGGMTPDYGVVHAHGLDAVFSVLCRVSPLEEVLAQAHDNLRVTARNVAAVWRAARG
Specific function: Glyoxylate catabolism. [C]
COG id: COG1929
COG function: function code G; Glycerate kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycerate kinase type-1 family [H]
Homologues:
Organism=Escherichia coli, GI1786724, Length=378, Percent_Identity=60.5820105820106, Blast_Score=415, Evalue=1e-117, Organism=Escherichia coli, GI145693185, Length=371, Percent_Identity=60.377358490566, Blast_Score=409, Evalue=1e-115,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018193 - InterPro: IPR004381 [H]
Pfam domain/function: PF02595 Gly_kinase [H]
EC number: =2.7.1.31 [H]
Molecular weight: Translated: 38375; Mature: 38375
Theoretical pI: Translated: 5.35; Mature: 5.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVVIAPDSFKESLSAMQVAQAIEQGFREIYPDANYLLLPMADGGEGTVDAMVAATGGQR CEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCEEEEEEECCCHH IAQTVTGPLGQPVAAFFGWLGDGGTAVIEMAAASGLHLVPPGQRDPSITTSYGTGELILA HHHHHCCCCCCHHHHHHHHCCCCCHHEEEEHHCCCEEECCCCCCCCCCEECCCCCHHHHH ALDRGARRLILGIGGSATNDGGAGMMQALGARLSDAQGEALAYGGGALGELAHIDLTGLD HHCCCCEEEEEECCCCCCCCCCHHHHHHHHHHCCCCCCCEEEECCCCCCCEEEEEEECCC ARLAQTDILVACDVDNPLCGPQGASAVFGPQKGATPEQVRRLDTALHRYGTLLEQVSGRS HHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCE VLRVAGSGAAGGMGAALCSLLNARLRPGIEIVTDALDLAQAVQGASLVITGEGRIDSQTV EEEEECCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCEE HGKTPIGVARVAKAAGVPVIALAGGMTPDYGVVHAHGLDAVFSVLCRVSPLEEVLAQAHD CCCCCCHHHHHHHHCCCCEEEEECCCCCCCCEEEECCHHHHHHHHHCCCHHHHHHHHCCC NLRVTARNVAAVWRAARG CEEEEHHHHHHHHHHCCC >Mature Secondary Structure MKVVIAPDSFKESLSAMQVAQAIEQGFREIYPDANYLLLPMADGGEGTVDAMVAATGGQR CEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCEEEEEEECCCHH IAQTVTGPLGQPVAAFFGWLGDGGTAVIEMAAASGLHLVPPGQRDPSITTSYGTGELILA HHHHHCCCCCCHHHHHHHHCCCCCHHEEEEHHCCCEEECCCCCCCCCCEECCCCCHHHHH ALDRGARRLILGIGGSATNDGGAGMMQALGARLSDAQGEALAYGGGALGELAHIDLTGLD HHCCCCEEEEEECCCCCCCCCCHHHHHHHHHHCCCCCCCEEEECCCCCCCEEEEEEECCC ARLAQTDILVACDVDNPLCGPQGASAVFGPQKGATPEQVRRLDTALHRYGTLLEQVSGRS HHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCE VLRVAGSGAAGGMGAALCSLLNARLRPGIEIVTDALDLAQAVQGASLVITGEGRIDSQTV EEEEECCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCEE HGKTPIGVARVAKAAGVPVIALAGGMTPDYGVVHAHGLDAVFSVLCRVSPLEEVLAQAHD CCCCCCHHHHHHHHCCCCEEEEECCCCCCCCEEEECCHHHHHHHHHCCCHHHHHHHHCCC NLRVTARNVAAVWRAARG CEEEEHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7584049; 9384377; 3020045 [H]