Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
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Accession | NC_012779 |
Length | 3,812,315 |
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The map label for this gene is 238921548
Identifier: 238921548
GI number: 238921548
Start: 3587666
End: 3587881
Strand: Reverse
Name: 238921548
Synonym: NT01EI_3700
Alternate gene names: NA
Gene position: 3587881-3587666 (Counterclockwise)
Preceding gene: 238921549
Following gene: 238921547
Centisome position: 94.11
GC content: 62.96
Gene sequence:
>216_bases ATGGTGACTGTATCCGCAACGGGGGCGCTGGTGGCGCTGATCGTTGCCATCATTTTGATTTTACGCAAGGTTCCTCCCGC CTACGGTATGATTGCCGGCGCGTTGGCCGGGGGATTGGTCGGCGGGGCCGATCTGGTGCAGACCATTGCCCTGATGATCG GCGGGGCGCAGGGGATCACCAGCGCAGTGCTGCGTATTCTCGGCGCGGGGTACTGA
Upstream 100 bases:
>100_bases TGGCTCGGCATCGATGCTCTCCCGCTTGGCAGGAGAGCACTGAGTACCCTTTGCCGCCCTCGGCGGCCATACCGATAAAA ATAACAAGAGGAGTCATTCT
Downstream 100 bases:
>100_bases TTGAGTCCGGCGCCGCCAGCGCCATCGCCGAGACGATCGTACGCCGCGTCGGCGAGGGGCGGGCGCTGCTGGCGCTGGCG GTGGCTACGCTGCTGCTGAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 71; Mature: 71
Protein sequence:
>71_residues MVTVSATGALVALIVAIILILRKVPPAYGMIAGALAGGLVGGADLVQTIALMIGGAQGITSAVLRILGAGY
Sequences:
>Translated_71_residues MVTVSATGALVALIVAIILILRKVPPAYGMIAGALAGGLVGGADLVQTIALMIGGAQGITSAVLRILGAGY >Mature_71_residues MVTVSATGALVALIVAIILILRKVPPAYGMIAGALAGGLVGGADLVQTIALMIGGAQGITSAVLRILGAGY
Specific function: Unknown
COG id: COG2610
COG function: function code GE; H+/gluconate symporter and related permeases
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CitM (TC 2.A.11) transporter family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003474 [H]
Pfam domain/function: PF02447 GntP_permease [H]
EC number: NA
Molecular weight: Translated: 6875; Mature: 6875
Theoretical pI: Translated: 10.01; Mature: 10.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVTVSATGALVALIVAIILILRKVPPAYGMIAGALAGGLVGGADLVQTIALMIGGAQGIT CEECCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHH SAVLRILGAGY HHHHHHHHCCC >Mature Secondary Structure MVTVSATGALVALIVAIILILRKVPPAYGMIAGALAGGLVGGADLVQTIALMIGGAQGIT CEECCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHH SAVLRILGAGY HHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]