Definition Edwardsiella ictaluri 93-146 chromosome, complete genome.
Accession NC_012779
Length 3,812,315

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The map label for this gene is 238921548

Identifier: 238921548

GI number: 238921548

Start: 3587666

End: 3587881

Strand: Reverse

Name: 238921548

Synonym: NT01EI_3700

Alternate gene names: NA

Gene position: 3587881-3587666 (Counterclockwise)

Preceding gene: 238921549

Following gene: 238921547

Centisome position: 94.11

GC content: 62.96

Gene sequence:

>216_bases
ATGGTGACTGTATCCGCAACGGGGGCGCTGGTGGCGCTGATCGTTGCCATCATTTTGATTTTACGCAAGGTTCCTCCCGC
CTACGGTATGATTGCCGGCGCGTTGGCCGGGGGATTGGTCGGCGGGGCCGATCTGGTGCAGACCATTGCCCTGATGATCG
GCGGGGCGCAGGGGATCACCAGCGCAGTGCTGCGTATTCTCGGCGCGGGGTACTGA

Upstream 100 bases:

>100_bases
TGGCTCGGCATCGATGCTCTCCCGCTTGGCAGGAGAGCACTGAGTACCCTTTGCCGCCCTCGGCGGCCATACCGATAAAA
ATAACAAGAGGAGTCATTCT

Downstream 100 bases:

>100_bases
TTGAGTCCGGCGCCGCCAGCGCCATCGCCGAGACGATCGTACGCCGCGTCGGCGAGGGGCGGGCGCTGCTGGCGCTGGCG
GTGGCTACGCTGCTGCTGAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 71; Mature: 71

Protein sequence:

>71_residues
MVTVSATGALVALIVAIILILRKVPPAYGMIAGALAGGLVGGADLVQTIALMIGGAQGITSAVLRILGAGY

Sequences:

>Translated_71_residues
MVTVSATGALVALIVAIILILRKVPPAYGMIAGALAGGLVGGADLVQTIALMIGGAQGITSAVLRILGAGY
>Mature_71_residues
MVTVSATGALVALIVAIILILRKVPPAYGMIAGALAGGLVGGADLVQTIALMIGGAQGITSAVLRILGAGY

Specific function: Unknown

COG id: COG2610

COG function: function code GE; H+/gluconate symporter and related permeases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CitM (TC 2.A.11) transporter family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003474 [H]

Pfam domain/function: PF02447 GntP_permease [H]

EC number: NA

Molecular weight: Translated: 6875; Mature: 6875

Theoretical pI: Translated: 10.01; Mature: 10.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVTVSATGALVALIVAIILILRKVPPAYGMIAGALAGGLVGGADLVQTIALMIGGAQGIT
CEECCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHH
SAVLRILGAGY
HHHHHHHHCCC
>Mature Secondary Structure
MVTVSATGALVALIVAIILILRKVPPAYGMIAGALAGGLVGGADLVQTIALMIGGAQGIT
CEECCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHH
SAVLRILGAGY
HHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]