Definition Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence.
Accession NC_012724
Length 3,906,507

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The map label for this gene is 238027572

Identifier: 238027572

GI number: 238027572

Start: 2175735

End: 2176166

Strand: Reverse

Name: 238027572

Synonym: bglu_1g19900

Alternate gene names: NA

Gene position: 2176166-2175735 (Counterclockwise)

Preceding gene: 238027573

Following gene: 238027567

Centisome position: 55.71

GC content: 66.2

Gene sequence:

>432_bases
ATGACACCATATCGAGACATCACCGATGGCGAATGGCAGCGCATTGCCGGCCTGCTGCCGGAATTGCGGCCGCGCAAGGA
ACGGCGCGGGCGGCCGCTGGCCGATGCCCGCAGCGTGCTGAACGGCGTGCTGTGGGTCATTTTCAGCGGCGCCTCATGGT
CGGCCATTCCCCGCCGCTATCCCGCGTATCAAACCTGCCACCGCCGCTTCATGATCTGGTACGAGTCGGGCACGCTGCGC
GCGGTGCTCGACGAGTTGTTCGGTCCGGCCGGCGACGATCTCTACGAAACCGTAACGGTCCGTATGCGCAAGCATGTGCA
TTCCCATGCGGCGGAGCTGCGACATGCCGTGCAGCCGAATCGGATCCGTCTGCCACGCATCGATCCCGCCTTCACGCCGG
AGCCGCACCTGCCGCCGCGTTCCGCGGCATGA

Upstream 100 bases:

>100_bases
TGAGCGACACCGCTTTACTCAAGCATTCTCGGAATTGTTCAATATCCAGCGCGAAAGCTGCCCGATATCGTGTGTCATGT
TTTTGTAAATGGAGAATGGC

Downstream 100 bases:

>100_bases
GCCGGACGCGGGGGCCGCCGGCTCGCGAGCGGCCGCCCGTCCAGGCGCACTGTGCGGCGTCCGGCGCGGCGCGCCGTGTC
CGGCCGCCCCGGCTTGATAC

Product: putative transposase

Products: NA

Alternate protein names: Transposase; IS5 Family Transposase OrfA

Number of amino acids: Translated: 143; Mature: 142

Protein sequence:

>143_residues
MTPYRDITDGEWQRIAGLLPELRPRKERRGRPLADARSVLNGVLWVIFSGASWSAIPRRYPAYQTCHRRFMIWYESGTLR
AVLDELFGPAGDDLYETVTVRMRKHVHSHAAELRHAVQPNRIRLPRIDPAFTPEPHLPPRSAA

Sequences:

>Translated_143_residues
MTPYRDITDGEWQRIAGLLPELRPRKERRGRPLADARSVLNGVLWVIFSGASWSAIPRRYPAYQTCHRRFMIWYESGTLR
AVLDELFGPAGDDLYETVTVRMRKHVHSHAAELRHAVQPNRIRLPRIDPAFTPEPHLPPRSAA
>Mature_142_residues
TPYRDITDGEWQRIAGLLPELRPRKERRGRPLADARSVLNGVLWVIFSGASWSAIPRRYPAYQTCHRRFMIWYESGTLRA
VLDELFGPAGDDLYETVTVRMRKHVHSHAAELRHAVQPNRIRLPRIDPAFTPEPHLPPRSAA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16503; Mature: 16372

Theoretical pI: Translated: 10.65; Mature: 10.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPYRDITDGEWQRIAGLLPELRPRKERRGRPLADARSVLNGVLWVIFSGASWSAIPRRY
CCCCCCCCCCHHHHHHHHHHCCCCCHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCC
PAYQTCHRRFMIWYESGTLRAVLDELFGPAGDDLYETVTVRMRKHVHSHAAELRHAVQPN
CHHHHHHHHEEEEECCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
RIRLPRIDPAFTPEPHLPPRSAA
CEECCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TPYRDITDGEWQRIAGLLPELRPRKERRGRPLADARSVLNGVLWVIFSGASWSAIPRRY
CCCCCCCCCHHHHHHHHHHCCCCCHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCC
PAYQTCHRRFMIWYESGTLRAVLDELFGPAGDDLYETVTVRMRKHVHSHAAELRHAVQPN
CHHHHHHHHEEEEECCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
RIRLPRIDPAFTPEPHLPPRSAA
CEECCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA