Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
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Accession | NC_012724 |
Length | 3,906,507 |
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The map label for this gene is 238027567
Identifier: 238027567
GI number: 238027567
Start: 2169950
End: 2171788
Strand: Reverse
Name: 238027567
Synonym: bglu_1g19850
Alternate gene names: NA
Gene position: 2171788-2169950 (Counterclockwise)
Preceding gene: 238027572
Following gene: 238027566
Centisome position: 55.59
GC content: 74.28
Gene sequence:
>1839_bases TTGCCGCCGCCGAGCAGCCCGCCCACCAGCGAGGTCACGGGTGCCAGCAGGCCGCCGCCCGAGCCTTTCGTCGCGGCGCC GTTGCTCGACCCGCTCAGGCCGGTCGCGACCGTGGCCGCGCCGGAGGTGGCGGCGCTGGTCGCGCCGGCGGCCGCACCGC CCGCTGCGCCCGTCACGCCCGCCAGCACGCCGGTGACCGGCGCGAGCAGGCCACTGGCGCTGCCGCCCGCCGAGCCGCCT CCCGTGGCGCCGCCGAGTGCGCCGGTGACCGACGAGACGAGCCCGGTGACGGGTGCCAGCGCGCCGCCCGCGGCGCCGCC TGCAGCCCCGCCCGTGGCGCCGCCGAGCGCGCCGGTGACCGACGAGACGAGCCCGGTGACGGGTGCCAGCGCACCGCCCG CGGCGCCGCCTGCGGCCCCGCCCGTGGCGCCGCCGAGTGCGCCGGTGACCGACGAGGCGAGACCCGTGACGGGTGCCAGC AGGCCGCTCGCGCTACCGCCTGCGGCCCCGCCCGTGACGCCGCCGAGCGCGCCGGTAACCGACGAAACGAGCCCGGTGAC CGGTGCCAGCGGGCCGCTGCCGCCGCTGGTGCCGCCGAGGCCGCCGAGCGTGTTGGCGAGGCCGCCCACCACCGAGCTGA CCGGTGCCAGCGGGTTGCCGCCGCTGCCGCCCGTGACCAGGCCGCCGAGCGAGGCGACGGTGTTGCCGGTGGCCGACACG GTCGAGCCGAGGCCCGCGGTGACGGGGTTGCCGCCGCCCTTCGTGGCGATCAGCGAGCCGGCCTGGTTCAGGCTGCCGCC GATCGTGCCCAGCAGCGTGTTGACCGGCGCGCCCAGTCCGGTCGCGTTGCCGACCGTCTGCGTCGTGTTGGCGACCACCG CGGTGATCGGCGTGATCGCCGAGCTGACGGTCTGCGTGATCTGCTGCACGGGACCGGTGCTCAATACGTTGCCGAGCGTC GCGCCGCCGTTGGCCACCGTGGTGCCGAGCGTCGAGACCAGGCCGCCGACGGTCGAGGTGACCGGGGCGAGCGGCGTGAG CGGGCCGCTGCCCAGGCTCGTCACGAGGTTGCCGGTGCCGGTCACGGCGTTGCCGAGCTGCGACACCACGTTGCCGGTCG AGCCGAGCGTGGTGCCGAGCGGGTTGGCGGTCGCGCCGAGCTGGCCGAGCCCGCCCGCGAGGCCGTTGCCGAGCGCGCTG ACCGCGCCGCCGACACTGCCCACCACGCTGCCGAGCGCCTGGGTCGGCGCGCTGCCGAGGCCCGGCACCGACTGGCTGCC GATCACCGTGCCGAGGCCCGACACGGTGGTGCCGACGCTCGACACCACGTTGCTGGTACTGGCGACCACGCTGCCTACCG CGTTGCTCGAACTCGTGCCGCTGGTGCCGGACGAGGAGGTGCCGCTGCTGCCCGACGACGAGGTGCCGCTGGTGCCGGAA CTGGTGCCCGACGAGGAGGTGCCGCTGGTGCCGGAGCTGGTGCCGGACGACGAGGTGCCGCTGATACCCGAGGAGGAGCC CGTGCCTTGCGGCGTATTCGTGCCGGAAGTGCCGGAAGTGCCGGAGCTCGAGCCGCCGGTGCCCTGGCTCAGCGAACCGG AACCGCCGCAGGCGGAGAGGGAAAGCATGGCTGCCGCGGTGGCCGCGATCAGCGTGGTCCGGAGCATGCCTTGGGTAATC GTTTGGGTATCCATGTCGTCCTCGCAGTGGTGTTGTGTGATCTGTGTTACCGCGAGATACACTCTGCAACACTCGTGCCA CCCGATTGAAAAGTCGATGCGAAAGTCGCTGCCTGGCGATATTCCGCAGGCCGCCAAGCCTTGCTGTATCTTGGTTTAA
Upstream 100 bases:
>100_bases GCGCCGACGAGGCGGTCGGGGAAGAGAGCGGGTGAATCGGTTGCATGATGGGTCTCCTGACGCGATTTGATTGACTTGAC CGACGAAACGCCGTTATTTC
Downstream 100 bases:
>100_bases CGTTTGCTAAATCCGATTCTCAAGCGAGCCGAATGCCGGGGCGTCGAAGTGCGATATGCGAGGAACGTAACGTAACGTCA CGAGCTTGCCGTTACGCGCT
Product: Proline-rich mucin-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 612; Mature: 611
Protein sequence:
>612_residues MPPPSSPPTSEVTGASRPPPEPFVAAPLLDPLRPVATVAAPEVAALVAPAAAPPAAPVTPASTPVTGASRPLALPPAEPP PVAPPSAPVTDETSPVTGASAPPAAPPAAPPVAPPSAPVTDETSPVTGASAPPAAPPAAPPVAPPSAPVTDEARPVTGAS RPLALPPAAPPVTPPSAPVTDETSPVTGASGPLPPLVPPRPPSVLARPPTTELTGASGLPPLPPVTRPPSEATVLPVADT VEPRPAVTGLPPPFVAISEPAWFRLPPIVPSSVLTGAPSPVALPTVCVVLATTAVIGVIAELTVCVICCTGPVLNTLPSV APPLATVVPSVETRPPTVEVTGASGVSGPLPRLVTRLPVPVTALPSCDTTLPVEPSVVPSGLAVAPSWPSPPARPLPSAL TAPPTLPTTLPSAWVGALPRPGTDWLPITVPRPDTVVPTLDTTLLVLATTLPTALLELVPLVPDEEVPLLPDDEVPLVPE LVPDEEVPLVPELVPDDEVPLIPEEEPVPCGVFVPEVPEVPELEPPVPWLSEPEPPQAERESMAAAVAAISVVRSMPWVI VWVSMSSSQWCCVICVTARYTLQHSCHPIEKSMRKSLPGDIPQAAKPCCILV
Sequences:
>Translated_612_residues MPPPSSPPTSEVTGASRPPPEPFVAAPLLDPLRPVATVAAPEVAALVAPAAAPPAAPVTPASTPVTGASRPLALPPAEPP PVAPPSAPVTDETSPVTGASAPPAAPPAAPPVAPPSAPVTDETSPVTGASAPPAAPPAAPPVAPPSAPVTDEARPVTGAS RPLALPPAAPPVTPPSAPVTDETSPVTGASGPLPPLVPPRPPSVLARPPTTELTGASGLPPLPPVTRPPSEATVLPVADT VEPRPAVTGLPPPFVAISEPAWFRLPPIVPSSVLTGAPSPVALPTVCVVLATTAVIGVIAELTVCVICCTGPVLNTLPSV APPLATVVPSVETRPPTVEVTGASGVSGPLPRLVTRLPVPVTALPSCDTTLPVEPSVVPSGLAVAPSWPSPPARPLPSAL TAPPTLPTTLPSAWVGALPRPGTDWLPITVPRPDTVVPTLDTTLLVLATTLPTALLELVPLVPDEEVPLLPDDEVPLVPE LVPDEEVPLVPELVPDDEVPLIPEEEPVPCGVFVPEVPEVPELEPPVPWLSEPEPPQAERESMAAAVAAISVVRSMPWVI VWVSMSSSQWCCVICVTARYTLQHSCHPIEKSMRKSLPGDIPQAAKPCCILV >Mature_611_residues PPPSSPPTSEVTGASRPPPEPFVAAPLLDPLRPVATVAAPEVAALVAPAAAPPAAPVTPASTPVTGASRPLALPPAEPPP VAPPSAPVTDETSPVTGASAPPAAPPAAPPVAPPSAPVTDETSPVTGASAPPAAPPAAPPVAPPSAPVTDEARPVTGASR PLALPPAAPPVTPPSAPVTDETSPVTGASGPLPPLVPPRPPSVLARPPTTELTGASGLPPLPPVTRPPSEATVLPVADTV EPRPAVTGLPPPFVAISEPAWFRLPPIVPSSVLTGAPSPVALPTVCVVLATTAVIGVIAELTVCVICCTGPVLNTLPSVA PPLATVVPSVETRPPTVEVTGASGVSGPLPRLVTRLPVPVTALPSCDTTLPVEPSVVPSGLAVAPSWPSPPARPLPSALT APPTLPTTLPSAWVGALPRPGTDWLPITVPRPDTVVPTLDTTLLVLATTLPTALLELVPLVPDEEVPLLPDDEVPLVPEL VPDEEVPLVPELVPDDEVPLIPEEEPVPCGVFVPEVPEVPELEPPVPWLSEPEPPQAERESMAAAVAAISVVRSMPWVIV WVSMSSSQWCCVICVTARYTLQHSCHPIEKSMRKSLPGDIPQAAKPCCILV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 61862; Mature: 61731
Theoretical pI: Translated: 3.98; Mature: 3.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPPPSSPPTSEVTGASRPPPEPFVAAPLLDPLRPVATVAAPEVAALVAPAAAPPAAPVTP CCCCCCCCCCCCCCCCCCCCCCEEECHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCC ASTPVTGASRPLALPPAEPPPVAPPSAPVTDETSPVTGASAPPAAPPAAPPVAPPSAPVT CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC DETSPVTGASAPPAAPPAAPPVAPPSAPVTDEARPVTGASRPLALPPAAPPVTPPSAPVT CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCC DETSPVTGASGPLPPLVPPRPPSVLARPPTTELTGASGLPPLPPVTRPPSEATVLPVADT CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCC VEPRPAVTGLPPPFVAISEPAWFRLPPIVPSSVLTGAPSPVALPTVCVVLATTAVIGVIA CCCCCCCCCCCCCCEEECCCCCEECCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH ELTVCVICCTGPVLNTLPSVAPPLATVVPSVETRPPTVEVTGASGVSGPLPRLVTRLPVP HHHHHHHHHCCHHHHHHHHHCCCHHHHCCCCCCCCCEEEEECCCCCCCCHHHHHHHCCCC VTALPSCDTTLPVEPSVVPSGLAVAPSWPSPPARPLPSALTAPPTLPTTLPSAWVGALPR EEECCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCHHHCCCCCCCCCCCHHHHCCCCC PGTDWLPITVPRPDTVVPTLDTTLLVLATTLPTALLELVPLVPDEEVPLLPDDEVPLVPE CCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC LVPDEEVPLVPELVPDDEVPLIPEEEPVPCGVFVPEVPEVPELEPPVPWLSEPEPPQAER CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCHHHH ESMAAAVAAISVVRSMPWVIVWVSMSSSQWCCVICVTARYTLQHSCHPIEKSMRKSLPGD HHHHHHHHHHHHHHCCCEEEEEEECCCCCCEEEEEEEHHHHHHHCCCHHHHHHHHHCCCC IPQAAKPCCILV CHHHCCCEEEEC >Mature Secondary Structure PPPSSPPTSEVTGASRPPPEPFVAAPLLDPLRPVATVAAPEVAALVAPAAAPPAAPVTP CCCCCCCCCCCCCCCCCCCCCEEECHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCC ASTPVTGASRPLALPPAEPPPVAPPSAPVTDETSPVTGASAPPAAPPAAPPVAPPSAPVT CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC DETSPVTGASAPPAAPPAAPPVAPPSAPVTDEARPVTGASRPLALPPAAPPVTPPSAPVT CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCC DETSPVTGASGPLPPLVPPRPPSVLARPPTTELTGASGLPPLPPVTRPPSEATVLPVADT CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCC VEPRPAVTGLPPPFVAISEPAWFRLPPIVPSSVLTGAPSPVALPTVCVVLATTAVIGVIA CCCCCCCCCCCCCCEEECCCCCEECCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH ELTVCVICCTGPVLNTLPSVAPPLATVVPSVETRPPTVEVTGASGVSGPLPRLVTRLPVP HHHHHHHHHCCHHHHHHHHHCCCHHHHCCCCCCCCCEEEEECCCCCCCCHHHHHHHCCCC VTALPSCDTTLPVEPSVVPSGLAVAPSWPSPPARPLPSALTAPPTLPTTLPSAWVGALPR EEECCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCHHHCCCCCCCCCCCHHHHCCCCC PGTDWLPITVPRPDTVVPTLDTTLLVLATTLPTALLELVPLVPDEEVPLLPDDEVPLVPE CCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC LVPDEEVPLVPELVPDDEVPLIPEEEPVPCGVFVPEVPEVPELEPPVPWLSEPEPPQAER CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCHHHH ESMAAAVAAISVVRSMPWVIVWVSMSSSQWCCVICVTARYTLQHSCHPIEKSMRKSLPGD HHHHHHHHHHHHHHCCCEEEEEEECCCCCCEEEEEEEHHHHHHHCCCHHHHHHHHHCCCC IPQAAKPCCILV CHHHCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA