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The map label for this gene is yhcM [H]

Identifier: 238027573

GI number: 238027573

Start: 2176362

End: 2177462

Strand: Reverse

Name: yhcM [H]

Synonym: bglu_1g19910

Alternate gene names: 238027573

Gene position: 2177462-2176362 (Counterclockwise)

Preceding gene: 238027574

Following gene: 238027572

Centisome position: 55.74

GC content: 64.67

Gene sequence:

>1101_bases
ATGATGAACGTCACCGAATACTACGAGCGTGAACTGGGCTCGCGCGGCTACCAGTCCGATACCGCGCAGCGCACCGCGAT
CACGCGGCTGCAGCAGTGCTTCGACGAATGGGTCGCCTACAAGGCGCGGCGCTCGAACGCGTTCAAGAAGCTCGTCATTC
GGCCGGAACTGCCGAAGGGCGTCTACATGTGGGGCGGCGTCGGCCGCGGCAAGAGCTTCCTGATGGACAGCTTCTTCGCG
GTGGTGCCGGTGCAGCGCAAGACGCGGCTGCATTTTCACGAATTCATGCGCGAGGTGCATCGCGAACTCGAGGAGCTGAA
AGGGCAGGCCGATCCGCTCGACGAGCTCGCGCGCCGCATCGCCAAGCGCTACCGGCTGATCTGCTTCGACGAATTCCATG
TGTCGGACATCGCCGACGCGATGATCCTGTACCGGCTGCTCGACCGGCTGTTCACCAACGGCGTGCAGTTCGTGATGACC
TCCAACTACGACCCGGACCTGCTCTATCCGGACGGCCTGCACCGCGACCGCATGCTGCCCGCGATCGCGCTGATCAAGCA
GAAGCTCGACGTGATGAACGTCGATGCCGGCGTCGACTACCGCCAGCGCACGCTCACCCAGGTGAGGATGTACCACACGC
CGCTCGGCGCCGAGGCCGATCGCGAATTGCGCAGGGCGTTCGCGAAGCTCGCGGCGGTGCCCGACGAGAGCCCGATCCTG
CACATCGAGAAGCGCGAGCTGAAGGCGCTGCGCAAGGCCGACGGCGTCGTCTGGTTCGATTTCGCCACGTTGTGCGGCGG
CCCGCGTTCGCAGAACGATTATCTCGAGCTGGCCACGCGCTTCCACGCGATCGTCCTGTCCGGCGTGCCGCAGATGTCGC
CGCGCATGGCCTCCGAGGCACGCCGCTTCACCTGGCTCATCGACGTGCTGTACGACCACAAGGTGAAGCTGCTGATGTCG
GCGGCGGTGCCGGCCGAGGAACTGTACGTGGAAGGACCGATGGCCAACGAATTCAGCCGCACCGTGTCGCGTATCGTCGA
GATGCAGTCTCAGGAATATCTCGAGACGCCGCGGCGCCTTGTCGATACCTCGCTGACGTGA

Upstream 100 bases:

>100_bases
AGGGCCGCCTGGGCGCCGCGCCGGCTCGCCGGCCGGCGTCGCCATTTGATGCCGAAGGCGGGCGGGAATTTTCCGCTCGC
CTTTGTTTTTTCCGCCTTGC

Downstream 100 bases:

>100_bases
CTGACCCGCCGCACCGCGGACGGCCTTTTCAGGCTCGCGCGTGGCGCGAGCGGGCCGAATCCCGCTGCGGCGGATTCGTA
CTATTTCGATTTTGCTGAGC

Product: putative ATPase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 366; Mature: 366

Protein sequence:

>366_residues
MMNVTEYYERELGSRGYQSDTAQRTAITRLQQCFDEWVAYKARRSNAFKKLVIRPELPKGVYMWGGVGRGKSFLMDSFFA
VVPVQRKTRLHFHEFMREVHRELEELKGQADPLDELARRIAKRYRLICFDEFHVSDIADAMILYRLLDRLFTNGVQFVMT
SNYDPDLLYPDGLHRDRMLPAIALIKQKLDVMNVDAGVDYRQRTLTQVRMYHTPLGAEADRELRRAFAKLAAVPDESPIL
HIEKRELKALRKADGVVWFDFATLCGGPRSQNDYLELATRFHAIVLSGVPQMSPRMASEARRFTWLIDVLYDHKVKLLMS
AAVPAEELYVEGPMANEFSRTVSRIVEMQSQEYLETPRRLVDTSLT

Sequences:

>Translated_366_residues
MMNVTEYYERELGSRGYQSDTAQRTAITRLQQCFDEWVAYKARRSNAFKKLVIRPELPKGVYMWGGVGRGKSFLMDSFFA
VVPVQRKTRLHFHEFMREVHRELEELKGQADPLDELARRIAKRYRLICFDEFHVSDIADAMILYRLLDRLFTNGVQFVMT
SNYDPDLLYPDGLHRDRMLPAIALIKQKLDVMNVDAGVDYRQRTLTQVRMYHTPLGAEADRELRRAFAKLAAVPDESPIL
HIEKRELKALRKADGVVWFDFATLCGGPRSQNDYLELATRFHAIVLSGVPQMSPRMASEARRFTWLIDVLYDHKVKLLMS
AAVPAEELYVEGPMANEFSRTVSRIVEMQSQEYLETPRRLVDTSLT
>Mature_366_residues
MMNVTEYYERELGSRGYQSDTAQRTAITRLQQCFDEWVAYKARRSNAFKKLVIRPELPKGVYMWGGVGRGKSFLMDSFFA
VVPVQRKTRLHFHEFMREVHRELEELKGQADPLDELARRIAKRYRLICFDEFHVSDIADAMILYRLLDRLFTNGVQFVMT
SNYDPDLLYPDGLHRDRMLPAIALIKQKLDVMNVDAGVDYRQRTLTQVRMYHTPLGAEADRELRRAFAKLAAVPDESPIL
HIEKRELKALRKADGVVWFDFATLCGGPRSQNDYLELATRFHAIVLSGVPQMSPRMASEARRFTWLIDVLYDHKVKLLMS
AAVPAEELYVEGPMANEFSRTVSRIVEMQSQEYLETPRRLVDTSLT

Specific function: Unknown

COG id: COG1485

COG function: function code R; Predicted ATPase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the AFG1 ATPase family [H]

Homologues:

Organism=Homo sapiens, GI21918872, Length=399, Percent_Identity=35.0877192982456, Blast_Score=228, Evalue=1e-59,
Organism=Escherichia coli, GI1789627, Length=363, Percent_Identity=44.9035812672176, Blast_Score=293, Evalue=1e-80,
Organism=Caenorhabditis elegans, GI17505769, Length=416, Percent_Identity=31.4903846153846, Blast_Score=204, Evalue=7e-53,
Organism=Saccharomyces cerevisiae, GI6320783, Length=321, Percent_Identity=34.5794392523364, Blast_Score=169, Evalue=5e-43,
Organism=Drosophila melanogaster, GI20129913, Length=349, Percent_Identity=33.810888252149, Blast_Score=185, Evalue=4e-47,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005654 [H]

Pfam domain/function: PF03969 AFG1_ATPase [H]

EC number: NA

Molecular weight: Translated: 42466; Mature: 42466

Theoretical pI: Translated: 8.69; Mature: 8.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMNVTEYYERELGSRGYQSDTAQRTAITRLQQCFDEWVAYKARRSNAFKKLVIRPELPKG
CCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCC
VYMWGGVGRGKSFLMDSFFAVVPVQRKTRLHFHEFMREVHRELEELKGQADPLDELARRI
EEEECCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
AKRYRLICFDEFHVSDIADAMILYRLLDRLFTNGVQFVMTSNYDPDLLYPDGLHRDRMLP
HHHHHHHEEECHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCHHHHHH
AIALIKQKLDVMNVDAGVDYRQRTLTQVRMYHTPLGAEADRELRRAFAKLAAVPDESPIL
HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCEE
HIEKRELKALRKADGVVWFDFATLCGGPRSQNDYLELATRFHAIVLSGVPQMSPRMASEA
EECHHHHHHHHHHCCEEEEEHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
RRFTWLIDVLYDHKVKLLMSAAVPAEELYVEGPMANEFSRTVSRIVEMQSQEYLETPRRL
HHHHHHHHHHHHHHHHHHHHHCCCHHHHEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
VDTSLT
HHCCCC
>Mature Secondary Structure
MMNVTEYYERELGSRGYQSDTAQRTAITRLQQCFDEWVAYKARRSNAFKKLVIRPELPKG
CCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCC
VYMWGGVGRGKSFLMDSFFAVVPVQRKTRLHFHEFMREVHRELEELKGQADPLDELARRI
EEEECCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
AKRYRLICFDEFHVSDIADAMILYRLLDRLFTNGVQFVMTSNYDPDLLYPDGLHRDRMLP
HHHHHHHEEECHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCHHHHHH
AIALIKQKLDVMNVDAGVDYRQRTLTQVRMYHTPLGAEADRELRRAFAKLAAVPDESPIL
HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCEE
HIEKRELKALRKADGVVWFDFATLCGGPRSQNDYLELATRFHAIVLSGVPQMSPRMASEA
EECHHHHHHHHHHCCEEEEEHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
RRFTWLIDVLYDHKVKLLMSAAVPAEELYVEGPMANEFSRTVSRIVEMQSQEYLETPRRL
HHHHHHHHHHHHHHHHHHHHHCCCHHHHEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
VDTSLT
HHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]