Definition Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence.
Accession NC_012724
Length 3,906,507

Click here to switch to the map view.

The map label for this gene is 238027518

Identifier: 238027518

GI number: 238027518

Start: 2118373

End: 2118828

Strand: Reverse

Name: 238027518

Synonym: bglu_1g19330

Alternate gene names: NA

Gene position: 2118828-2118373 (Counterclockwise)

Preceding gene: 238027519

Following gene: 238027517

Centisome position: 54.24

GC content: 61.62

Gene sequence:

>456_bases
ATGACAGAGAACGAAGTTGATTTCTTTCCGCTGCGGGTGACGGGCGTGACCGCCACCGGCAAGCGACGCTTTGATCCAGA
GGGTAAGCGCAAGCTGATCGAGGCCTGTATGCAGCCAGGTGCGTCGATTGCCGGACTTGCGCTGAAGGCCGGCGTCAACG
CGAACCAACTGCATAAATGGATTCACTTGCGCGAGCGTACGAGCGGGACTGCGCTGACGACAACTCGTAAGCCGGCGCCA
TCGGCATTCGTACCGGTCGTGACCGTCAACGACGTGATGTCCGTGGCGCAGCGCGCACCCGCGCCTGAATCGCCGAAGAA
GAACCACTCGATAAGCTCCGCCGTGCAGGCTCGACTTTCGGCGCAGTTGCCCAATGGCGTGACGCTGCGACTCGAATGCG
CAGCGCACGATGCCGCCCTCGTGCGAGCGATGATCGAAGCATTGGGAGTGCGCTAA

Upstream 100 bases:

>100_bases
GCGACCTGATAAAACGTAAGCGCGAATTTAAGCGCACCTAGAATTCCCGGATGAATGCGCGCAGGCTTGCGTCCGCAACC
ACAACTTGCGGACGCAACCT

Downstream 100 bases:

>100_bases
TGTTTCGGCTCGACGCCGAATTGCGGGTCTACTTGCACCGCGATGCGATTGATTTCCGAGCCGGCATCAACAGCCTCGTG
ATGCTGGTCGAGCAGTCGTT

Product: transposase IS3/IS911

Products: NA

Alternate protein names: Transposase; Transposase-Family Protein; Helix-Turn-Helix Fis-Type; Orf_Bo

Number of amino acids: Translated: 151; Mature: 150

Protein sequence:

>151_residues
MTENEVDFFPLRVTGVTATGKRRFDPEGKRKLIEACMQPGASIAGLALKAGVNANQLHKWIHLRERTSGTALTTTRKPAP
SAFVPVVTVNDVMSVAQRAPAPESPKKNHSISSAVQARLSAQLPNGVTLRLECAAHDAALVRAMIEALGVR

Sequences:

>Translated_151_residues
MTENEVDFFPLRVTGVTATGKRRFDPEGKRKLIEACMQPGASIAGLALKAGVNANQLHKWIHLRERTSGTALTTTRKPAP
SAFVPVVTVNDVMSVAQRAPAPESPKKNHSISSAVQARLSAQLPNGVTLRLECAAHDAALVRAMIEALGVR
>Mature_150_residues
TENEVDFFPLRVTGVTATGKRRFDPEGKRKLIEACMQPGASIAGLALKAGVNANQLHKWIHLRERTSGTALTTTRKPAPS
AFVPVVTVNDVMSVAQRAPAPESPKKNHSISSAVQARLSAQLPNGVTLRLECAAHDAALVRAMIEALGVR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16160; Mature: 16029

Theoretical pI: Translated: 10.95; Mature: 10.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTENEVDFFPLRVTGVTATGKRRFDPEGKRKLIEACMQPGASIAGLALKAGVNANQLHKW
CCCCCCEEEEEEEEEEEECCCCCCCCHHHHHHHHHHHCCCCCEEHHHHCCCCCHHHHHHH
IHLRERTSGTALTTTRKPAPSAFVPVVTVNDVMSVAQRAPAPESPKKNHSISSAVQARLS
HHHHHCCCCCEEEECCCCCCCCEEEEEEHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHH
AQLPNGVTLRLECAAHDAALVRAMIEALGVR
HCCCCCEEEEEEECCCHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TENEVDFFPLRVTGVTATGKRRFDPEGKRKLIEACMQPGASIAGLALKAGVNANQLHKW
CCCCCEEEEEEEEEEEECCCCCCCCHHHHHHHHHHHCCCCCEEHHHHCCCCCHHHHHHH
IHLRERTSGTALTTTRKPAPSAFVPVVTVNDVMSVAQRAPAPESPKKNHSISSAVQARLS
HHHHHCCCCCEEEECCCCCCCCEEEEEEHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHH
AQLPNGVTLRLECAAHDAALVRAMIEALGVR
HCCCCCEEEEEEECCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA