Definition Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence.
Accession NC_012724
Length 3,906,507

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The map label for this gene is 238026842

Identifier: 238026842

GI number: 238026842

Start: 1316479

End: 1316901

Strand: Direct

Name: 238026842

Synonym: bglu_1g12050

Alternate gene names: NA

Gene position: 1316479-1316901 (Clockwise)

Preceding gene: 238026841

Following gene: 238026843

Centisome position: 33.7

GC content: 65.96

Gene sequence:

>423_bases
ATGAACACGTTCGATGAAGCAGCGCTGATTCGGGAGCTGACGCGGGACGAGGGGCGGCGGCTGAAGCCCTATGTCGACAC
GGTCGGCAAGATCACGATCGGGGTGGGGCGGAACCTGACGGACGTCGGCATCAGCGATGACGAGTGCGATCTGCTGCTGA
CTCACGACGTCGCGAGCGCGGTGGCCTGGCTGGATGCCGAGTTGCCTTGGTGGTGCAGGCTCGATCCAGTCCGGCAGCGG
GTGGTCGTCAACATGGCGTTCAACCTCGGCGCCAAGCTATTGACGTTCAAGAACACGCTCGGCGCGATGGAGCGTGGCGA
CTACGCCGTCGCCGCCGCGGGCATGCTGGCTTCGAAGTGGGCGCGGCAGGTTGGAGCGCGTGCGGATCGGCTCGCGGGAA
TGATGCGAGCCGGCAGGGAGTGA

Upstream 100 bases:

>100_bases
CTGATCGATACGCCGGAGACGACGATGCTGATCGGCATGTCGATCGTGATCGTTTGGGCTTTGGCTCGGAAAGTGTACTG
GTGGAAGCGAGGAAAGAAGC

Downstream 100 bases:

>100_bases
GCACGATGCTTCGGAAATGGGTTGTGTATCTGCTAGTCGCTGGAGTAGCGGCGGGCGCTGGTGCATATGGGGCGCACGTG
TTCGACGCTCGCAACCTGGC

Product: lysozyme

Products: NA

Alternate protein names: Chain A; Family; Phage Related Lysozyme; Phage Lysozyme; Glycoside Hydrolase Family; Phage Baseplate Hub Subunit And Tail Lysozyme

Number of amino acids: Translated: 140; Mature: 140

Protein sequence:

>140_residues
MNTFDEAALIRELTRDEGRRLKPYVDTVGKITIGVGRNLTDVGISDDECDLLLTHDVASAVAWLDAELPWWCRLDPVRQR
VVVNMAFNLGAKLLTFKNTLGAMERGDYAVAAAGMLASKWARQVGARADRLAGMMRAGRE

Sequences:

>Translated_140_residues
MNTFDEAALIRELTRDEGRRLKPYVDTVGKITIGVGRNLTDVGISDDECDLLLTHDVASAVAWLDAELPWWCRLDPVRQR
VVVNMAFNLGAKLLTFKNTLGAMERGDYAVAAAGMLASKWARQVGARADRLAGMMRAGRE
>Mature_140_residues
MNTFDEAALIRELTRDEGRRLKPYVDTVGKITIGVGRNLTDVGISDDECDLLLTHDVASAVAWLDAELPWWCRLDPVRQR
VVVNMAFNLGAKLLTFKNTLGAMERGDYAVAAAGMLASKWARQVGARADRLAGMMRAGRE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15450; Mature: 15450

Theoretical pI: Translated: 7.27; Mature: 7.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTFDEAALIRELTRDEGRRLKPYVDTVGKITIGVGRNLTDVGISDDECDLLLTHDVASA
CCCHHHHHHHHHHHHHCCCCCCHHHHHHCEEEECCCCCCCCCCCCCCCCCEEEHHHHHHH
VAWLDAELPWWCRLDPVRQRVVVNMAFNLGAKLLTFKNTLGAMERGDYAVAAAGMLASKW
HHHHCCCCCCEECCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
ARQVGARADRLAGMMRAGRE
HHHHCCHHHHHHHHHHCCCC
>Mature Secondary Structure
MNTFDEAALIRELTRDEGRRLKPYVDTVGKITIGVGRNLTDVGISDDECDLLLTHDVASA
CCCHHHHHHHHHHHHHCCCCCCHHHHHHCEEEECCCCCCCCCCCCCCCCCEEEHHHHHHH
VAWLDAELPWWCRLDPVRQRVVVNMAFNLGAKLLTFKNTLGAMERGDYAVAAAGMLASKW
HHHHCCCCCCEECCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
ARQVGARADRLAGMMRAGRE
HHHHCCHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA