Definition Chloroflexus sp. Y-400-fl chromosome, complete genome.
Accession NC_012032
Length 5,268,950

Click here to switch to the map view.

The map label for this gene is 222523353

Identifier: 222523353

GI number: 222523353

Start: 57052

End: 57930

Strand: Direct

Name: 222523353

Synonym: Chy400_0054

Alternate gene names: NA

Gene position: 57052-57930 (Clockwise)

Preceding gene: 222523352

Following gene: 222523354

Centisome position: 1.08

GC content: 59.04

Gene sequence:

>879_bases
ATGAACCCATTCATCCGGTTGCGCGAAGCGGTGATCGATACCGTATTGAGCATAAACGAGCAGCAGGTGCTCAATGCCGG
CACCGGAACCGTACCTGCACCTACCGACGACGGCGTAGCCCTGGCAGCCGCGCTCAGGCAGGCGATGCAGCAATTCAAAG
CCCAGGCCATGGATGAAGAAGGGAAGCTGGTGGCGTATCAGCGCCTGCGCAACGATCCGGCGTACCTTGCCTACCGTTCA
GAACTAACCCCACAACTGCAACGGTTTGATCCGGCGTCACTTCCTGATCGCGCCACTCGTCTCGCCTTCTGGATCAACCT
GTACAACGCCCTGGTGATAGATGCGGTGATCGCCTTTGGCATCACAACCAGCGTCGCCGATCAATGGTCGGGCTTACGCT
TCTTTCGAGCGGCTGCCTACCAGATCGGTGGTCTACGCTGTTCACTCGACGACATCGAACACGGTATTCTACGCGCCAAT
CGCGGCCACCCCTTCATTCCCGGCCCACAATTTGCCGCCAGCGATCCACGGCTAGGCTGGATCATCGATCCACCAGATCC
ACGCATCCACTTTGCGCTCAACTGCGCCAGCCTCTCGTGTCCGCCGATTGGGGTATATCGCGCAGAACAGATAGACCAGC
AACTCGACCTGGCGCTGCGCGCCTTCGTAGCCGCCGATGTAGCAATTGACCCGACGCGCGCCGAGATTCATCTGTCACGC
ATTTTTGACTGGTACCGGGAAGATTTTGGGGGAACGGATGGGATTATTCAACTCTTACGACAGGCACTCCCCGCCGACGA
ACGACGCGCCTGGCTCTTGCAGGCACGACAGGCCCGTCTCATCTACCGCCCATACGACTGGCGATTGAACCTGGCCTGA

Upstream 100 bases:

>100_bases
GTGGCCGGATCGTGCTGTGTGATGGGATGGCGTTGACCTGGCCCGGCCCACGCACAGCCACTGCCATCACAACATTTCGG
CGCATTCTGGAGCAGACTAC

Downstream 100 bases:

>100_bases
AGGAGCGGCTATGACCGACGACTGGCGCAAGCAGTCACTCAAAGAATTGTACCGCCTGACCGGACAGATCTTCTCGCAGA
TACCGGCACTGGCCCGGCTA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 292; Mature: 292

Protein sequence:

>292_residues
MNPFIRLREAVIDTVLSINEQQVLNAGTGTVPAPTDDGVALAAALRQAMQQFKAQAMDEEGKLVAYQRLRNDPAYLAYRS
ELTPQLQRFDPASLPDRATRLAFWINLYNALVIDAVIAFGITTSVADQWSGLRFFRAAAYQIGGLRCSLDDIEHGILRAN
RGHPFIPGPQFAASDPRLGWIIDPPDPRIHFALNCASLSCPPIGVYRAEQIDQQLDLALRAFVAADVAIDPTRAEIHLSR
IFDWYREDFGGTDGIIQLLRQALPADERRAWLLQARQARLIYRPYDWRLNLA

Sequences:

>Translated_292_residues
MNPFIRLREAVIDTVLSINEQQVLNAGTGTVPAPTDDGVALAAALRQAMQQFKAQAMDEEGKLVAYQRLRNDPAYLAYRS
ELTPQLQRFDPASLPDRATRLAFWINLYNALVIDAVIAFGITTSVADQWSGLRFFRAAAYQIGGLRCSLDDIEHGILRAN
RGHPFIPGPQFAASDPRLGWIIDPPDPRIHFALNCASLSCPPIGVYRAEQIDQQLDLALRAFVAADVAIDPTRAEIHLSR
IFDWYREDFGGTDGIIQLLRQALPADERRAWLLQARQARLIYRPYDWRLNLA
>Mature_292_residues
MNPFIRLREAVIDTVLSINEQQVLNAGTGTVPAPTDDGVALAAALRQAMQQFKAQAMDEEGKLVAYQRLRNDPAYLAYRS
ELTPQLQRFDPASLPDRATRLAFWINLYNALVIDAVIAFGITTSVADQWSGLRFFRAAAYQIGGLRCSLDDIEHGILRAN
RGHPFIPGPQFAASDPRLGWIIDPPDPRIHFALNCASLSCPPIGVYRAEQIDQQLDLALRAFVAADVAIDPTRAEIHLSR
IFDWYREDFGGTDGIIQLLRQALPADERRAWLLQARQARLIYRPYDWRLNLA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Caenorhabditis elegans, GI133901914, Length=225, Percent_Identity=30.6666666666667, Blast_Score=102, Evalue=3e-22,
Organism=Caenorhabditis elegans, GI133901916, Length=225, Percent_Identity=30.6666666666667, Blast_Score=101, Evalue=5e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32766; Mature: 32766

Theoretical pI: Translated: 6.14; Mature: 6.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNPFIRLREAVIDTVLSINEQQVLNAGTGTVPAPTDDGVALAAALRQAMQQFKAQAMDEE
CCHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCC
GKLVAYQRLRNDPAYLAYRSELTPQLQRFDPASLPDRATRLAFWINLYNALVIDAVIAFG
CCEEHHHHHCCCCCEEEEHHHCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
ITTSVADQWSGLRFFRAAAYQIGGLRCSLDDIEHGILRANRGHPFIPGPQFAASDPRLGW
HHHHHHHHHCCHHHHHHHHHHHCCEEEEHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEE
IIDPPDPRIHFALNCASLSCPPIGVYRAEQIDQQLDLALRAFVAADVAIDPTRAEIHLSR
EECCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEECCCHHHHHHHH
IFDWYREDFGGTDGIIQLLRQALPADERRAWLLQARQARLIYRPYDWRLNLA
HHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHCCEEEECCCCCEEECC
>Mature Secondary Structure
MNPFIRLREAVIDTVLSINEQQVLNAGTGTVPAPTDDGVALAAALRQAMQQFKAQAMDEE
CCHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCC
GKLVAYQRLRNDPAYLAYRSELTPQLQRFDPASLPDRATRLAFWINLYNALVIDAVIAFG
CCEEHHHHHCCCCCEEEEHHHCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
ITTSVADQWSGLRFFRAAAYQIGGLRCSLDDIEHGILRANRGHPFIPGPQFAASDPRLGW
HHHHHHHHHCCHHHHHHHHHHHCCEEEEHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEE
IIDPPDPRIHFALNCASLSCPPIGVYRAEQIDQQLDLALRAFVAADVAIDPTRAEIHLSR
EECCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEECCCHHHHHHHH
IFDWYREDFGGTDGIIQLLRQALPADERRAWLLQARQARLIYRPYDWRLNLA
HHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHCCEEEECCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA