Definition Agrobacterium vitis S4 plasmid pAtS4b, complete sequence.
Accession NC_011991
Length 130,435

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The map label for this gene is 222109167

Identifier: 222109167

GI number: 222109167

Start: 54838

End: 55782

Strand: Direct

Name: 222109167

Synonym: Avi_9567

Alternate gene names: NA

Gene position: 54838-55782 (Clockwise)

Preceding gene: 222109166

Following gene: 222109170

Centisome position: 42.04

GC content: 61.59

Gene sequence:

>945_bases
CTGATGTTTCACACCCCTGTCAACGGCGGGGAGGGCGCTCAGCTCTCCTCGATCCGCCTTCGCGTGTTGTCGCTCGGCGC
TGGCGTCCAGTCTACGACGCTCGCACTGATGGCAGCGCATGGCGAGATCGGACCCATGCCCGATTGCGCGATTTTTGCTG
ATACCGGTTGGGAGCCGAAAGCCGTCTATGAACATCTCGAATGGCTGATGTCGCCCAACGTCCTGCCGTTCCCGGTTCAT
ATCGTATCGGCCGGTAATATCCGCGAGCAACTGATACAGGCGGGCCGCGGCAATCGCTGGGCGTCCATTCCCGCTTTCAC
AAAATCCGTGATCCGCTCCGGGACAGAGCTCCCGATCCTGGATGAGGACGACGAGGGCGAGCTGATCGAAATCGGCCGGC
GGCAGACGAAGGTCGAGACGGTATCGATCGGCATGCTCAGGAGGCAATGCACGGGCGATTTCAAGATCGTGCCTATCCGG
CGAAAGGTGAGAGAGCTTGCCGGACTGACCCGCAAACGGTCCCCGAAATGTGCGGTGGTTGAATCGTTGATAGGCATAAG
CCTTGATGAGATCGTGCGTGCCAAGCCAAGCTTCGAGGCGTGGCAAGTGAAGCGTTACCCGTTGATCGAGCAGCGCCTAA
AGCGTTGCGACTGCCTGGCTTGGCTGCGCCGGCATGGCTATCCCGAGCCCCCGAAATCCGCCTGTATCGGCTGCCCCTTC
CATGACAATCGCCGCTGGCGCGCAATGCGCGATCACGATCCCGAAGCATGGGCCGATGCAGTCGATGTCGATCGGGCAAT
CCGCACGGGCCTTCGGGGCATTCGCGGCGAGGTCTACCTGCACCGATCCTGTGTGCCGTTGGAGGATGCCGACCTGTCGA
CGGCGGCCGATCACGGCCAACTCGATCTGTGGCCAAACGAATGCGAGGGCATGTGCGGGCTGTGA

Upstream 100 bases:

>100_bases
TTGTCTCAGCCGATGCGACGATCATCGAGATCAACGGACCGATCGGCATGATGCGCCGTGACCTCCGGCTCTGGCTGGCC
GGTGAGGGTGGGGGGACAGA

Downstream 100 bases:

>100_bases
TCAGCCGGATGTTTGAACGACGGTGATGACGCGCGGCTGACCAAACGGAGCGGCCGCGGTTGCTCGAGAACGTGCGTGGT
ATCCGTCGTCGCCACCCCGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 314; Mature: 314

Protein sequence:

>314_residues
MMFHTPVNGGEGAQLSSIRLRVLSLGAGVQSTTLALMAAHGEIGPMPDCAIFADTGWEPKAVYEHLEWLMSPNVLPFPVH
IVSAGNIREQLIQAGRGNRWASIPAFTKSVIRSGTELPILDEDDEGELIEIGRRQTKVETVSIGMLRRQCTGDFKIVPIR
RKVRELAGLTRKRSPKCAVVESLIGISLDEIVRAKPSFEAWQVKRYPLIEQRLKRCDCLAWLRRHGYPEPPKSACIGCPF
HDNRRWRAMRDHDPEAWADAVDVDRAIRTGLRGIRGEVYLHRSCVPLEDADLSTAADHGQLDLWPNECEGMCGL

Sequences:

>Translated_314_residues
MMFHTPVNGGEGAQLSSIRLRVLSLGAGVQSTTLALMAAHGEIGPMPDCAIFADTGWEPKAVYEHLEWLMSPNVLPFPVH
IVSAGNIREQLIQAGRGNRWASIPAFTKSVIRSGTELPILDEDDEGELIEIGRRQTKVETVSIGMLRRQCTGDFKIVPIR
RKVRELAGLTRKRSPKCAVVESLIGISLDEIVRAKPSFEAWQVKRYPLIEQRLKRCDCLAWLRRHGYPEPPKSACIGCPF
HDNRRWRAMRDHDPEAWADAVDVDRAIRTGLRGIRGEVYLHRSCVPLEDADLSTAADHGQLDLWPNECEGMCGL
>Mature_314_residues
MMFHTPVNGGEGAQLSSIRLRVLSLGAGVQSTTLALMAAHGEIGPMPDCAIFADTGWEPKAVYEHLEWLMSPNVLPFPVH
IVSAGNIREQLIQAGRGNRWASIPAFTKSVIRSGTELPILDEDDEGELIEIGRRQTKVETVSIGMLRRQCTGDFKIVPIR
RKVRELAGLTRKRSPKCAVVESLIGISLDEIVRAKPSFEAWQVKRYPLIEQRLKRCDCLAWLRRHGYPEPPKSACIGCPF
HDNRRWRAMRDHDPEAWADAVDVDRAIRTGLRGIRGEVYLHRSCVPLEDADLSTAADHGQLDLWPNECEGMCGL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35089; Mature: 35089

Theoretical pI: Translated: 7.46; Mature: 7.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.2 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
3.2 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMFHTPVNGGEGAQLSSIRLRVLSLGAGVQSTTLALMAAHGEIGPMPDCAIFADTGWEPK
CEEECCCCCCCCCCHHHHEEEEEHHCCCCCHHHHEEEEECCCCCCCCCCEEEECCCCCHH
AVYEHLEWLMSPNVLPFPVHIVSAGNIREQLIQAGRGNRWASIPAFTKSVIRSGTELPIL
HHHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCEE
DEDDEGELIEIGRRQTKVETVSIGMLRRQCTGDFKIVPIRRKVRELAGLTRKRSPKCAVV
CCCCCCCHHHHCCHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHCCCCCHHHH
ESLIGISLDEIVRAKPSFEAWQVKRYPLIEQRLKRCDCLAWLRRHGYPEPPKSACIGCPF
HHHHCCCHHHHHHCCCCCCHHEEECCCHHHHHHHHHHHHHHHHHCCCCCCCHHCEEECCC
HDNRRWRAMRDHDPEAWADAVDVDRAIRTGLRGIRGEVYLHRSCVPLEDADLSTAADHGQ
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCC
LDLWPNECEGMCGL
EECCHHHCCCCCCC
>Mature Secondary Structure
MMFHTPVNGGEGAQLSSIRLRVLSLGAGVQSTTLALMAAHGEIGPMPDCAIFADTGWEPK
CEEECCCCCCCCCCHHHHEEEEEHHCCCCCHHHHEEEEECCCCCCCCCCEEEECCCCCHH
AVYEHLEWLMSPNVLPFPVHIVSAGNIREQLIQAGRGNRWASIPAFTKSVIRSGTELPIL
HHHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCEE
DEDDEGELIEIGRRQTKVETVSIGMLRRQCTGDFKIVPIRRKVRELAGLTRKRSPKCAVV
CCCCCCCHHHHCCHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHCCCCCHHHH
ESLIGISLDEIVRAKPSFEAWQVKRYPLIEQRLKRCDCLAWLRRHGYPEPPKSACIGCPF
HHHHCCCHHHHHHCCCCCCHHEEECCCHHHHHHHHHHHHHHHHHCCCCCCCHHCEEECCC
HDNRRWRAMRDHDPEAWADAVDVDRAIRTGLRGIRGEVYLHRSCVPLEDADLSTAADHGQ
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCC
LDLWPNECEGMCGL
EECCHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA