Definition Agrobacterium vitis S4 plasmid pAtS4b, complete sequence.
Accession NC_011991
Length 130,435

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The map label for this gene is 222109166

Identifier: 222109166

GI number: 222109166

Start: 54290

End: 54841

Strand: Direct

Name: 222109166

Synonym: Avi_9566

Alternate gene names: NA

Gene position: 54290-54841 (Clockwise)

Preceding gene: 222109165

Following gene: 222109167

Centisome position: 41.62

GC content: 64.13

Gene sequence:

>552_bases
ATGACCCCGCTCCATTCCTCCTCCCGACTGATCATCCTCGCCTGCTCGGCGACAAAGCGTGCGGAGCCGGACTATATGCC
GGCACTCGAGCGCTACGACGGACCTCTTTGGAAGACCCTCCGTGCCGCCGATCCGGAAGGGATGAAAGCCAGTGTCGCCT
TCCTGTCGGCACGTCTTGGCTTTCGCGCCGCCGACACGCCGATTGAGATGTACGACGCCCGGATGACCCCGGAGATCGCA
GCAGCCATAAAGGCCGGCGGTCTCGCAACGCGGTGGCCCCGCCCGAAAACCCAGCGCCGGGTGATGCCATCCGGCGAACA
TGCGGGCGAACATATCGCCAGCATGACGCAGTACGGGCGCGCACCGTTTTGCGAAGTCGCGCTTGTCGGTGGCCATCTCT
ACCTCGATGTCATGCGGCATTTCGTCGGGCTGTTTCGCGATGGCGGCTTTGTCTCAGCCGATGCGACGATCATCGAGATC
AACGGACCGATCGGCATGATGCGCCGTGACCTCCGGCTCTGGCTGGCCGGTGAGGGTGGGGGGACAGACTGA

Upstream 100 bases:

>100_bases
ACAGGAAGGCGATTTTCCAGGCGGCAGCCCACGCGCAACGGGCGGTGAATTACCTCCATGGTCTGCAGCCGTTGGCCTCT
GAAGAGAGGGAGGCAGCCTG

Downstream 100 bases:

>100_bases
TGTTTCACACCCCTGTCAACGGCGGGGAGGGCGCTCAGCTCTCCTCGATCCGCCTTCGCGTGTTGTCGCTCGGCGCTGGC
GTCCAGTCTACGACGCTCGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 183; Mature: 182

Protein sequence:

>183_residues
MTPLHSSSRLIILACSATKRAEPDYMPALERYDGPLWKTLRAADPEGMKASVAFLSARLGFRAADTPIEMYDARMTPEIA
AAIKAGGLATRWPRPKTQRRVMPSGEHAGEHIASMTQYGRAPFCEVALVGGHLYLDVMRHFVGLFRDGGFVSADATIIEI
NGPIGMMRRDLRLWLAGEGGGTD

Sequences:

>Translated_183_residues
MTPLHSSSRLIILACSATKRAEPDYMPALERYDGPLWKTLRAADPEGMKASVAFLSARLGFRAADTPIEMYDARMTPEIA
AAIKAGGLATRWPRPKTQRRVMPSGEHAGEHIASMTQYGRAPFCEVALVGGHLYLDVMRHFVGLFRDGGFVSADATIIEI
NGPIGMMRRDLRLWLAGEGGGTD
>Mature_182_residues
TPLHSSSRLIILACSATKRAEPDYMPALERYDGPLWKTLRAADPEGMKASVAFLSARLGFRAADTPIEMYDARMTPEIAA
AIKAGGLATRWPRPKTQRRVMPSGEHAGEHIASMTQYGRAPFCEVALVGGHLYLDVMRHFVGLFRDGGFVSADATIIEIN
GPIGMMRRDLRLWLAGEGGGTD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19974; Mature: 19843

Theoretical pI: Translated: 8.71; Mature: 8.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
5.5 %Met     (Translated Protein)
6.6 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPLHSSSRLIILACSATKRAEPDYMPALERYDGPLWKTLRAADPEGMKASVAFLSARLG
CCCCCCCCCEEEEEECCCCCCCCCCCHHHHHCCCHHHHHHHCCCCCCCHHHHHHHHHHCC
FRAADTPIEMYDARMTPEIAAAIKAGGLATRWPRPKTQRRVMPSGEHAGEHIASMTQYGR
CCCCCCCHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCC
APFCEVALVGGHLYLDVMRHFVGLFRDGGFVSADATIIEINGPIGMMRRDLRLWLAGEGG
CCCEEEEEECCHHHHHHHHHHHHHHCCCCEEECCEEEEEECCCHHHHHHEEEEEEECCCC
GTD
CCC
>Mature Secondary Structure 
TPLHSSSRLIILACSATKRAEPDYMPALERYDGPLWKTLRAADPEGMKASVAFLSARLG
CCCCCCCCEEEEEECCCCCCCCCCCHHHHHCCCHHHHHHHCCCCCCCHHHHHHHHHHCC
FRAADTPIEMYDARMTPEIAAAIKAGGLATRWPRPKTQRRVMPSGEHAGEHIASMTQYGR
CCCCCCCHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCC
APFCEVALVGGHLYLDVMRHFVGLFRDGGFVSADATIIEINGPIGMMRRDLRLWLAGEGG
CCCEEEEEECCHHHHHHHHHHHHHHCCCCEEECCEEEEEECCCHHHHHHEEEEEEECCCC
GTD
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA