Definition Halothermothrix orenii H 168 chromosome, complete genome.
Accession NC_011899
Length 2,578,146

Click here to switch to the map view.

The map label for this gene is 220931125

Identifier: 220931125

GI number: 220931125

Start: 279253

End: 280158

Strand: Direct

Name: 220931125

Synonym: Hore_02770

Alternate gene names: NA

Gene position: 279253-280158 (Clockwise)

Preceding gene: 220931124

Following gene: 220931126

Centisome position: 10.83

GC content: 33.66

Gene sequence:

>906_bases
ATGACTAAAAAGGCTGGATTATTTGTTGGTTTGACATTATCTTTTAGTTGGTTGATAGCTTTTTTATTTTTTCATTTTGT
TGGTACAGGTAATATTTTATTTTATACTTTGATGTCAATCGGGTATATGTTTATTCCCTTACTGGTAACAATTATAATAC
AGAAAATTATTTATAATGAACCTGTTAAAAAACCGATGGGTATTTCTTTTAAGTTTAATAAATGGTTTGTGATAGCCTGG
TTATTGCCACTAATAATGGCTTTTATGACTTTTGGGGTCAGTTTATTATTTCCCCAGGTTGAGTACAGTCCTGATATGGC
AGGTATGTTTGCCAGGTATCTGGATCAGTTTGGACCAGAAAAGATAGAACAGATGAAACAGGCAATGAAAGTTGCCCCCA
TTCATCCATTCTGGATGTCAGTAATTCAGGCTTTACTGGCAGGATTTACTATAAATGCTTTAGTAGCTTTTGGAGAAGAA
TTAGGCTGGAGGGGTTTTTTACAGCAGGAATTTAATAAACTCGGATTCTGGCCATCATCCCTATTAATCGGTTTTATCTG
GGGGTTATGGCATGCTCCCTTAATATTACAGGGCCATAATTATCCCCAGCATCCTAAATTCGGGGTTTTGATGATGATTA
TCTGGTGTATTTTATTATCACCTTTATTTAGTTATATAAGAATCAAGTCAGGTTCAGTTATTGCCGCTGCTATTTTTCAT
GGTACTATCAATGCCAGCTTTGGTCTGGCAATTGTATTAATCAAAGGAGGTAGTGATTTAATAGTAGGATTTACCGGATT
AGCTGGCTTTATTGTACTGTTGTTACTAAATGTTCTTTTATTTCTTTATGATATCAGGTATGCTAAAGAGTCTATTATTA
ATAATTCTTTATATATAAAGATATGA

Upstream 100 bases:

>100_bases
ATCTTTCTGGGAAGTCTTATCTTAACAGGGGTTTTATGTTTAGCATATTCTTTCATTGTATATAAAAAAATGGAGAGGAA
ATTGGAGGAAGGGGACCAAG

Downstream 100 bases:

>100_bases
GACCTGTTCAATATTATCTTTTGTTGGTCCAACCTTTAATAGACTTTAACCCCCCTGCCATATATGATATACTTTAAATA
AGGAATAAAATGTAAACAAT

Product: abortive infection protein

Products: NA

Alternate protein names: CAAX Amino Terminal Protease Family Protein; CAAX Amino Terminal Protease Family; Membrane Spanning Protein; Caax Amino Terminal Protease Family; Phosphoenolpyruvate Synthase

Number of amino acids: Translated: 301; Mature: 300

Protein sequence:

>301_residues
MTKKAGLFVGLTLSFSWLIAFLFFHFVGTGNILFYTLMSIGYMFIPLLVTIIIQKIIYNEPVKKPMGISFKFNKWFVIAW
LLPLIMAFMTFGVSLLFPQVEYSPDMAGMFARYLDQFGPEKIEQMKQAMKVAPIHPFWMSVIQALLAGFTINALVAFGEE
LGWRGFLQQEFNKLGFWPSSLLIGFIWGLWHAPLILQGHNYPQHPKFGVLMMIIWCILLSPLFSYIRIKSGSVIAAAIFH
GTINASFGLAIVLIKGGSDLIVGFTGLAGFIVLLLLNVLLFLYDIRYAKESIINNSLYIKI

Sequences:

>Translated_301_residues
MTKKAGLFVGLTLSFSWLIAFLFFHFVGTGNILFYTLMSIGYMFIPLLVTIIIQKIIYNEPVKKPMGISFKFNKWFVIAW
LLPLIMAFMTFGVSLLFPQVEYSPDMAGMFARYLDQFGPEKIEQMKQAMKVAPIHPFWMSVIQALLAGFTINALVAFGEE
LGWRGFLQQEFNKLGFWPSSLLIGFIWGLWHAPLILQGHNYPQHPKFGVLMMIIWCILLSPLFSYIRIKSGSVIAAAIFH
GTINASFGLAIVLIKGGSDLIVGFTGLAGFIVLLLLNVLLFLYDIRYAKESIINNSLYIKI
>Mature_300_residues
TKKAGLFVGLTLSFSWLIAFLFFHFVGTGNILFYTLMSIGYMFIPLLVTIIIQKIIYNEPVKKPMGISFKFNKWFVIAWL
LPLIMAFMTFGVSLLFPQVEYSPDMAGMFARYLDQFGPEKIEQMKQAMKVAPIHPFWMSVIQALLAGFTINALVAFGEEL
GWRGFLQQEFNKLGFWPSSLLIGFIWGLWHAPLILQGHNYPQHPKFGVLMMIIWCILLSPLFSYIRIKSGSVIAAAIFHG
TINASFGLAIVLIKGGSDLIVGFTGLAGFIVLLLLNVLLFLYDIRYAKESIINNSLYIKI

Specific function: Unknown

COG id: COG1266

COG function: function code R; Predicted metal-dependent membrane protease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34032; Mature: 33900

Theoretical pI: Translated: 9.94; Mature: 9.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKKAGLFVGLTLSFSWLIAFLFFHFVGTGNILFYTLMSIGYMFIPLLVTIIIQKIIYNE
CCCCCCEEEEHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PVKKPMGISFKFNKWFVIAWLLPLIMAFMTFGVSLLFPQVEYSPDMAGMFARYLDQFGPE
CCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCHH
KIEQMKQAMKVAPIHPFWMSVIQALLAGFTINALVAFGEELGWRGFLQQEFNKLGFWPSS
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCHHH
LLIGFIWGLWHAPLILQGHNYPQHPKFGVLMMIIWCILLSPLFSYIRIKSGSVIAAAIFH
HHHHHHHHHHCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHH
GTINASFGLAIVLIKGGSDLIVGFTGLAGFIVLLLLNVLLFLYDIRYAKESIINNSLYIK
HHCCCCCCEEEEEEECCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEE
I
C
>Mature Secondary Structure 
TKKAGLFVGLTLSFSWLIAFLFFHFVGTGNILFYTLMSIGYMFIPLLVTIIIQKIIYNE
CCCCCEEEEHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PVKKPMGISFKFNKWFVIAWLLPLIMAFMTFGVSLLFPQVEYSPDMAGMFARYLDQFGPE
CCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCHH
KIEQMKQAMKVAPIHPFWMSVIQALLAGFTINALVAFGEELGWRGFLQQEFNKLGFWPSS
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCHHH
LLIGFIWGLWHAPLILQGHNYPQHPKFGVLMMIIWCILLSPLFSYIRIKSGSVIAAAIFH
HHHHHHHHHHCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHH
GTINASFGLAIVLIKGGSDLIVGFTGLAGFIVLLLLNVLLFLYDIRYAKESIINNSLYIK
HHCCCCCCEEEEEEECCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEE
I
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA