| Definition | Anaeromyxobacter dehalogenans 2CP-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011891 |
| Length | 5,029,329 |
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The map label for this gene is trxA [H]
Identifier: 220916850
GI number: 220916850
Start: 1950498
End: 1950830
Strand: Direct
Name: trxA [H]
Synonym: A2cp1_1746
Alternate gene names: 220916850
Gene position: 1950498-1950830 (Clockwise)
Preceding gene: 220916849
Following gene: 220916851
Centisome position: 38.78
GC content: 76.28
Gene sequence:
>333_bases ATGGCGAGCGGCGTGATGGACATCGGGGACGCGGAGTTCGAGCGCGAGGTGCTGAGCGCGGCCGAGCCGGTGCTGGTGGA GTTCACCGCGGCGTGGTGCGCGCCCTGCAGGGCGCTCGCGCCCACGCTGGAGGCGCTCGCGAGCGGCTACCGCGGCCGCG TGAAGGTCGCGGCGCTCGACGTGGAGCGGCACCCGGCCACCGCCGAGCGGTACGGGATCCGCGCGATGCCCACGCTGCTC TTCTTCAAGGGCGGCGCGGTGGCCCGGCAGCTCGTCGGCGCGGTGCCGCGCGCGCGCCTCGAGGACGTGGTGCGCGAGCT GCTGCCGCGGTAG
Upstream 100 bases:
>100_bases AGCGTTCCGGCGCGGCCGGTCGCCCCGGCGCGCCGCCGCGGGTAGATCCGGTCCGCGCGGCGGCCGGGCACTCCGCCCGG CGGCGCGGGCGGAGGCGGCC
Downstream 100 bases:
>100_bases GCGGGCGCACGGCCGGGTGGGAGCCCGAACCACCTCCCGCGCCGGGCGCGGGCCTGCGCGCGCCGGCGCAGGTCGGCGCT TCCGACGCCGGCGCCCGGAG
Product: thioredoxin
Products: NA
Alternate protein names: Trx [H]
Number of amino acids: Translated: 110; Mature: 109
Protein sequence:
>110_residues MASGVMDIGDAEFEREVLSAAEPVLVEFTAAWCAPCRALAPTLEALASGYRGRVKVAALDVERHPATAERYGIRAMPTLL FFKGGAVARQLVGAVPRARLEDVVRELLPR
Sequences:
>Translated_110_residues MASGVMDIGDAEFEREVLSAAEPVLVEFTAAWCAPCRALAPTLEALASGYRGRVKVAALDVERHPATAERYGIRAMPTLL FFKGGAVARQLVGAVPRARLEDVVRELLPR >Mature_109_residues ASGVMDIGDAEFEREVLSAAEPVLVEFTAAWCAPCRALAPTLEALASGYRGRVKVAALDVERHPATAERYGIRAMPTLLF FKGGAVARQLVGAVPRARLEDVVRELLPR
Specific function: Component of the thioredoxin-thioredoxin reductase system. Participates in various redox reactions through the reversible oxidation of its active center dithiol to a disulfide and catalyzes dithiol-disulfide exchange reactions [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 thioredoxin domain [H]
Homologues:
Organism=Homo sapiens, GI21361403, Length=97, Percent_Identity=35.0515463917526, Blast_Score=79, Evalue=9e-16, Organism=Homo sapiens, GI5031973, Length=100, Percent_Identity=35, Blast_Score=68, Evalue=1e-12, Organism=Homo sapiens, GI21361657, Length=88, Percent_Identity=37.5, Blast_Score=63, Evalue=4e-11, Organism=Escherichia coli, GI87082331, Length=104, Percent_Identity=41.3461538461538, Blast_Score=105, Evalue=9e-25, Organism=Escherichia coli, GI1788936, Length=93, Percent_Identity=37.6344086021505, Blast_Score=80, Evalue=4e-17, Organism=Caenorhabditis elegans, GI212646193, Length=105, Percent_Identity=37.1428571428571, Blast_Score=81, Evalue=1e-16, Organism=Caenorhabditis elegans, GI17510299, Length=104, Percent_Identity=40.3846153846154, Blast_Score=79, Evalue=6e-16, Organism=Caenorhabditis elegans, GI17556044, Length=81, Percent_Identity=41.9753086419753, Blast_Score=76, Evalue=4e-15, Organism=Caenorhabditis elegans, GI17549970, Length=82, Percent_Identity=40.2439024390244, Blast_Score=73, Evalue=3e-14, Organism=Caenorhabditis elegans, GI71998175, Length=87, Percent_Identity=39.0804597701149, Blast_Score=71, Evalue=1e-13, Organism=Caenorhabditis elegans, GI17509965, Length=85, Percent_Identity=34.1176470588235, Blast_Score=70, Evalue=2e-13, Organism=Saccharomyces cerevisiae, GI6321648, Length=88, Percent_Identity=36.3636363636364, Blast_Score=68, Evalue=2e-13, Organism=Drosophila melanogaster, GI28573567, Length=96, Percent_Identity=38.5416666666667, Blast_Score=81, Evalue=1e-16, Organism=Drosophila melanogaster, GI24639826, Length=77, Percent_Identity=37.6623376623377, Blast_Score=73, Evalue=3e-14, Organism=Drosophila melanogaster, GI24664269, Length=71, Percent_Identity=45.0704225352113, Blast_Score=70, Evalue=2e-13, Organism=Drosophila melanogaster, GI24639068, Length=93, Percent_Identity=31.1827956989247, Blast_Score=70, Evalue=3e-13, Organism=Drosophila melanogaster, GI17648013, Length=82, Percent_Identity=36.5853658536585, Blast_Score=70, Evalue=4e-13, Organism=Drosophila melanogaster, GI24583090, Length=82, Percent_Identity=36.5853658536585, Blast_Score=70, Evalue=4e-13, Organism=Drosophila melanogaster, GI19921434, Length=82, Percent_Identity=37.8048780487805, Blast_Score=68, Evalue=1e-12, Organism=Drosophila melanogaster, GI21358065, Length=82, Percent_Identity=32.9268292682927, Blast_Score=64, Evalue=3e-11,
Paralogues:
None
Copy number: 3,500 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005746 - InterPro: IPR017936 - InterPro: IPR012336 - InterPro: IPR017937 - InterPro: IPR013766 - InterPro: IPR012335 [H]
Pfam domain/function: PF00085 Thioredoxin [H]
EC number: NA
Molecular weight: Translated: 11864; Mature: 11733
Theoretical pI: Translated: 7.27; Mature: 7.27
Prosite motif: PS00194 THIOREDOXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASGVMDIGDAEFEREVLSAAEPVLVEFTAAWCAPCRALAPTLEALASGYRGRVKVAALD CCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEE VERHPATAERYGIRAMPTLLFFKGGAVARQLVGAVPRARLEDVVRELLPR CCCCCCCHHHCCCHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHCCC >Mature Secondary Structure ASGVMDIGDAEFEREVLSAAEPVLVEFTAAWCAPCRALAPTLEALASGYRGRVKVAALD CCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEE VERHPATAERYGIRAMPTLLFFKGGAVARQLVGAVPRARLEDVVRELLPR CCCCCCCHHHCCCHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Reduction reactions; participates in dithiol-disulfide exchange reactions [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9795152; 10671452; 12000953 [H]