Definition Desulfurococcus kamchatkensis 1221n chromosome, complete genome.
Accession NC_011766
Length 1,365,223

Click here to switch to the map view.

The map label for this gene is 218883880

Identifier: 218883880

GI number: 218883880

Start: 533058

End: 533591

Strand: Reverse

Name: 218883880

Synonym: DKAM_0569

Alternate gene names: NA

Gene position: 533591-533058 (Counterclockwise)

Preceding gene: 218883883

Following gene: 218883879

Centisome position: 39.08

GC content: 47.94

Gene sequence:

>534_bases
GTGGTGGTCTATAGGTTGAGGGAGAGCGTGCAGGATCTAATAGTTAAATGGTTGATGGAGGAGTCATTTACAACCAGGAA
GCTTGAGGCACCTCCTGGAGCAGGTATTAAATGGGGAATCAATGTAACTACTCCAGGCAACCCTGGCGTGAACTTCACCG
TCGTGAACCCCGTTGACAAGCCGGATAGGTATATACTCGCCCTCGCCATAGTTGTATCGCCTGAGCATGCACGGGAACTA
GAGAAAATGAAGCCTGCTGAGAGGCTTAGAGTGATGAATAGCATTCTATCCAAGGCTCTAACCGTGTGCATAGACTGTAA
GATAATGGTGCAGCCGAATATAGTTACCCCGCAGACAATAACTGTGAACATGGAGTTTTTCGAGGATGAGTTACGCAGCT
ACGGTAAGTCATTCTTTCTAAGGCTTGTATGGAGATTCCTCAACACTTACCTGGCGATAGTCTCAGGGTTTAACGAATGG
ATGCCTGTGCCGCCGCCCAGCACGGATAAGTTGTCGCCACAAACCTTTATATAG

Upstream 100 bases:

>100_bases
TCTATCAAGGTGCTATACCACCATTGTTAACCTTAAAGTTATACTTAAAGCCGTACAGTATTAAATAAGCCCTTCAAGAA
ATAAAGTATTGTTAAGGCCA

Downstream 100 bases:

>100_bases
GAGTTAAATAATAGCGTATCAATGGTGACTCTTAGTGAGGCTTAGAGGACTCATTCCACTATTTCTCCTGGCACTAATGC
TCTCAACGATCTATAGTGTA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 177; Mature: 177

Protein sequence:

>177_residues
MVVYRLRESVQDLIVKWLMEESFTTRKLEAPPGAGIKWGINVTTPGNPGVNFTVVNPVDKPDRYILALAIVVSPEHAREL
EKMKPAERLRVMNSILSKALTVCIDCKIMVQPNIVTPQTITVNMEFFEDELRSYGKSFFLRLVWRFLNTYLAIVSGFNEW
MPVPPPSTDKLSPQTFI

Sequences:

>Translated_177_residues
MVVYRLRESVQDLIVKWLMEESFTTRKLEAPPGAGIKWGINVTTPGNPGVNFTVVNPVDKPDRYILALAIVVSPEHAREL
EKMKPAERLRVMNSILSKALTVCIDCKIMVQPNIVTPQTITVNMEFFEDELRSYGKSFFLRLVWRFLNTYLAIVSGFNEW
MPVPPPSTDKLSPQTFI
>Mature_177_residues
MVVYRLRESVQDLIVKWLMEESFTTRKLEAPPGAGIKWGINVTTPGNPGVNFTVVNPVDKPDRYILALAIVVSPEHAREL
EKMKPAERLRVMNSILSKALTVCIDCKIMVQPNIVTPQTITVNMEFFEDELRSYGKSFFLRLVWRFLNTYLAIVSGFNEW
MPVPPPSTDKLSPQTFI

Specific function: Unknown

COG id: COG5440

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20186; Mature: 20186

Theoretical pI: Translated: 8.69; Mature: 8.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVVYRLRESVQDLIVKWLMEESFTTRKLEAPPGAGIKWGINVTTPGNPGVNFTVVNPVDK
CCHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCEEEEEEEECCCCCCEEEEEECCCCC
PDRYILALAIVVSPEHARELEKMKPAERLRVMNSILSKALTVCIDCKIMVQPNIVTPQTI
CCCEEEEEEEEECCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCEE
TVNMEFFEDELRSYGKSFFLRLVWRFLNTYLAIVSGFNEWMPVPPPSTDKLSPQTFI
EEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MVVYRLRESVQDLIVKWLMEESFTTRKLEAPPGAGIKWGINVTTPGNPGVNFTVVNPVDK
CCHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCEEEEEEEECCCCCCEEEEEECCCCC
PDRYILALAIVVSPEHARELEKMKPAERLRVMNSILSKALTVCIDCKIMVQPNIVTPQTI
CCCEEEEEEEEECCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCEE
TVNMEFFEDELRSYGKSFFLRLVWRFLNTYLAIVSGFNEWMPVPPPSTDKLSPQTFI
EEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA