Definition | Buchnera aphidicola str. Sg (Schizaphis graminum), complete genome. |
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Accession | NC_004061 |
Length | 641,454 |
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The map label for this gene is mutL
Identifier: 21672810
GI number: 21672810
Start: 603477
End: 605225
Strand: Reverse
Name: mutL
Synonym: BUsg550
Alternate gene names: 21672810
Gene position: 605225-603477 (Counterclockwise)
Preceding gene: 21672811
Following gene: 21672809
Centisome position: 94.35
GC content: 21.21
Gene sequence:
>1749_bases ATGCAACCTATTCGTATGTTATCATCTAGTTTATCCAGTCAAATTTCAGCTGGAGAAGTAATTGAAAGACCATCATCTGT TATTAAAGAGCTTTTAGAAAACAGTATTGATGCGCAAGCAAAAAACATTGATATCAGTGTCGAAAGAAGTGGACTTAATT CTATAACAGTAAAAGATGATGGTTTTGGCATTGAAAAAGACCAATTATTACTTGCGATTTCACGTCATGCCACTAGTAAA ATTAATAGACTTTCAGATTTAGATAATATCAATACATTTGGTTTTAGAGGAGAAGCGTTAGCAAGTATTCGTGCTGTTTC AAGGATGAAATTAATTTCATGTTCTCAAAATAGTAATATAGCATGGAGTATATATTCAGAAGGATTTTCTAATCATACTT TATTGCAACCGATTGCTCATCCAATTGGAACGAGTATAATAGTAGATAATTTATTTTATAATATCCCTGTTCGTCTTAAA TTTATAAAAAATGAAAGATCAGAATTTCTAAAAATTGATGAAACAATAAAAAAGATTGCTTTATCTAATTTTGGTATCAA TATTTTTTTTAAAAAAGATAAAAAATTATTTGTATCATATAAAGCAATAACAAAAAATAACAATAAAATTCATCGATTAA AAACAGTATTTAATCAAATCGACCTAAATTATGTTTTAGAAATTAAAGAAAAAATGCACAATATTACATTGTTTGGATGG TTAATTTTTCCTTCATCTCTTTCAAGTACTTTTAAAAAAATACAATATTGCTATGTTAACAATCGATTTGTTTATAACAA TCTTATAAAGAGTGCTGTTTTTAATTCATTTTATGAAATAATAGGGAATAAAAGAAGTACATCGTTTATTTTATATCTTA CATTGCCTTCTAATGAAATAGATATTAATATTCATCCTACTAAAAATGAAATTAAATTTCATAAATCTAACATTATTTAT TTTTTTGTATATCAATCTATTTTATCTAGTTTAAAAAAATGTAAAATTAAATATATTTCAAATAATTTTTTTTTAAAAAC TCATTCTAATAAATGTAAAAATAATAATTCTGATTCTTTAAATACTAAGTTAGTATCTCAAATTCATTCTAAATACGAAA AAAAAGATTTATATAAAGATGTAATATCAACTGATTTGTTTAAAATCAATTCTCAAAGATTTTTAAAAGAATACTTTTTT TCTTTTGGAAAATTATTAATTGTTTTTCAAAAATATTATGGATTAATGTATTATTCAAATACCTTTTCATTGATTTCTTT TCCCCTAGCAAAAAAGATAGTTGAACAATATAAATTACGAAGCGCTATTAAAAATAATATGATACCTGAAATTTTTTCAT ATAATTTTTTGTATTTTATAACTTTTAAACAGAATAAAATATTATCTAATAATTTAAAATTATTATTAAAATTTGGTTTT AATCTTATTTTGAAAGAAAAATATTTTTTTTTAAAAACTATTCCTATTTTTTTAAAAAATCAAAATCTTGATGTGTTGTT ATCTAGTTTTTTTTCATTTATTTTTTTTAAAAAAAAAATATATATTAAAGATATAATTAAATGGTTTGATACTACTATAT TAATAGAAAAAAATTCTTGGAATTATGAAGACGGAATTTCAATATTATTAGAAATAGAGTATTTTTGTCCTTCTATATTT AAAAAACCTCCATTAAAACTATTGCAAAAAATAAATGTTGATGAAGTATTATGTATATTAAAAGTATAA
Upstream 100 bases:
>100_bases GAAATTAGGATAATTATTTCAGAATATCATTCTATAATAAAAGATTTTTTATAAATTTATACTAAAAATCATTTCTTATA ATTTTAGAGAATAAGGTCAA
Downstream 100 bases:
>100_bases GTTCTGATAAAGAGAAAAAACCTATTATTTTTTTTTTAATGGGACCAACTGGATGCGGAAAAAGTAAATTCGCTATTTTT CTGAGAAAATATTTACCAAT
Product: DNA mismatch repair protein MutL
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 582; Mature: 582
Protein sequence:
>582_residues MQPIRMLSSSLSSQISAGEVIERPSSVIKELLENSIDAQAKNIDISVERSGLNSITVKDDGFGIEKDQLLLAISRHATSK INRLSDLDNINTFGFRGEALASIRAVSRMKLISCSQNSNIAWSIYSEGFSNHTLLQPIAHPIGTSIIVDNLFYNIPVRLK FIKNERSEFLKIDETIKKIALSNFGINIFFKKDKKLFVSYKAITKNNNKIHRLKTVFNQIDLNYVLEIKEKMHNITLFGW LIFPSSLSSTFKKIQYCYVNNRFVYNNLIKSAVFNSFYEIIGNKRSTSFILYLTLPSNEIDINIHPTKNEIKFHKSNIIY FFVYQSILSSLKKCKIKYISNNFFLKTHSNKCKNNNSDSLNTKLVSQIHSKYEKKDLYKDVISTDLFKINSQRFLKEYFF SFGKLLIVFQKYYGLMYYSNTFSLISFPLAKKIVEQYKLRSAIKNNMIPEIFSYNFLYFITFKQNKILSNNLKLLLKFGF NLILKEKYFFLKTIPIFLKNQNLDVLLSSFFSFIFFKKKIYIKDIIKWFDTTILIEKNSWNYEDGISILLEIEYFCPSIF KKPPLKLLQKINVDEVLCILKV
Sequences:
>Translated_582_residues MQPIRMLSSSLSSQISAGEVIERPSSVIKELLENSIDAQAKNIDISVERSGLNSITVKDDGFGIEKDQLLLAISRHATSK INRLSDLDNINTFGFRGEALASIRAVSRMKLISCSQNSNIAWSIYSEGFSNHTLLQPIAHPIGTSIIVDNLFYNIPVRLK FIKNERSEFLKIDETIKKIALSNFGINIFFKKDKKLFVSYKAITKNNNKIHRLKTVFNQIDLNYVLEIKEKMHNITLFGW LIFPSSLSSTFKKIQYCYVNNRFVYNNLIKSAVFNSFYEIIGNKRSTSFILYLTLPSNEIDINIHPTKNEIKFHKSNIIY FFVYQSILSSLKKCKIKYISNNFFLKTHSNKCKNNNSDSLNTKLVSQIHSKYEKKDLYKDVISTDLFKINSQRFLKEYFF SFGKLLIVFQKYYGLMYYSNTFSLISFPLAKKIVEQYKLRSAIKNNMIPEIFSYNFLYFITFKQNKILSNNLKLLLKFGF NLILKEKYFFLKTIPIFLKNQNLDVLLSSFFSFIFFKKKIYIKDIIKWFDTTILIEKNSWNYEDGISILLEIEYFCPSIF KKPPLKLLQKINVDEVLCILKV >Mature_582_residues MQPIRMLSSSLSSQISAGEVIERPSSVIKELLENSIDAQAKNIDISVERSGLNSITVKDDGFGIEKDQLLLAISRHATSK INRLSDLDNINTFGFRGEALASIRAVSRMKLISCSQNSNIAWSIYSEGFSNHTLLQPIAHPIGTSIIVDNLFYNIPVRLK FIKNERSEFLKIDETIKKIALSNFGINIFFKKDKKLFVSYKAITKNNNKIHRLKTVFNQIDLNYVLEIKEKMHNITLFGW LIFPSSLSSTFKKIQYCYVNNRFVYNNLIKSAVFNSFYEIIGNKRSTSFILYLTLPSNEIDINIHPTKNEIKFHKSNIIY FFVYQSILSSLKKCKIKYISNNFFLKTHSNKCKNNNSDSLNTKLVSQIHSKYEKKDLYKDVISTDLFKINSQRFLKEYFF SFGKLLIVFQKYYGLMYYSNTFSLISFPLAKKIVEQYKLRSAIKNNMIPEIFSYNFLYFITFKQNKILSNNLKLLLKFGF NLILKEKYFFLKTIPIFLKNQNLDVLLSSFFSFIFFKKKIYIKDIIKWFDTTILIEKNSWNYEDGISILLEIEYFCPSIF KKPPLKLLQKINVDEVLCILKV
Specific function: This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a "molecular matchmaker", a protein that promotes the formation of a stable complex between two or more DNA-bindi
COG id: COG0323
COG function: function code L; DNA mismatch repair enzyme (predicted ATPase)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the DNA mismatch repair mutL/hexB family
Homologues:
Organism=Homo sapiens, GI4557757, Length=335, Percent_Identity=32.8358208955224, Blast_Score=169, Evalue=7e-42, Organism=Homo sapiens, GI4505913, Length=347, Percent_Identity=26.5129682997118, Blast_Score=116, Evalue=5e-26, Organism=Homo sapiens, GI310128478, Length=347, Percent_Identity=26.2247838616715, Blast_Score=116, Evalue=7e-26, Organism=Homo sapiens, GI4505911, Length=331, Percent_Identity=29.607250755287, Blast_Score=114, Evalue=4e-25, Organism=Homo sapiens, GI189458898, Length=331, Percent_Identity=29.607250755287, Blast_Score=113, Evalue=4e-25, Organism=Homo sapiens, GI189458896, Length=316, Percent_Identity=29.4303797468354, Blast_Score=110, Evalue=3e-24, Organism=Homo sapiens, GI91992160, Length=358, Percent_Identity=24.8603351955307, Blast_Score=91, Evalue=2e-18, Organism=Homo sapiens, GI91992162, Length=358, Percent_Identity=24.8603351955307, Blast_Score=91, Evalue=2e-18, Organism=Homo sapiens, GI310128480, Length=310, Percent_Identity=23.8709677419355, Blast_Score=86, Evalue=1e-16, Organism=Homo sapiens, GI263191589, Length=241, Percent_Identity=28.6307053941909, Blast_Score=84, Evalue=3e-16, Organism=Escherichia coli, GI1790612, Length=613, Percent_Identity=31.1582381729201, Blast_Score=383, Evalue=1e-107, Organism=Caenorhabditis elegans, GI71991825, Length=328, Percent_Identity=27.7439024390244, Blast_Score=131, Evalue=1e-30, Organism=Caenorhabditis elegans, GI17562796, Length=358, Percent_Identity=29.0502793296089, Blast_Score=130, Evalue=2e-30, Organism=Saccharomyces cerevisiae, GI6323819, Length=328, Percent_Identity=34.1463414634146, Blast_Score=160, Evalue=5e-40, Organism=Saccharomyces cerevisiae, GI6324247, Length=337, Percent_Identity=29.080118694362, Blast_Score=110, Evalue=4e-25, Organism=Saccharomyces cerevisiae, GI6325093, Length=289, Percent_Identity=28.0276816608997, Blast_Score=96, Evalue=2e-20, Organism=Saccharomyces cerevisiae, GI6323063, Length=347, Percent_Identity=24.7838616714697, Blast_Score=75, Evalue=2e-14, Organism=Drosophila melanogaster, GI17136968, Length=318, Percent_Identity=30.188679245283, Blast_Score=165, Evalue=8e-41, Organism=Drosophila melanogaster, GI17136970, Length=187, Percent_Identity=32.620320855615, Blast_Score=106, Evalue=4e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): MUTL_BUCAP (Q8K913)
Other databases:
- EMBL: AE013218 - RefSeq: NP_660877.1 - ProteinModelPortal: Q8K913 - EnsemblBacteria: EBBUCT00000000405 - GeneID: 1005813 - GenomeReviews: AE013218_GR - KEGG: bas:BUsg550 - GeneTree: EBGT00050000007768 - HOGENOM: HBG520262 - OMA: KNEIKFH - ProtClustDB: CLSK316519 - BioCyc: BAPH198804:BUSG550-MONOMER - HAMAP: MF_00149 - InterPro: IPR003594 - InterPro: IPR002099 - InterPro: IPR013507 - InterPro: IPR014762 - InterPro: IPR020667 - InterPro: IPR014763 - InterPro: IPR014790 - InterPro: IPR020568 - InterPro: IPR014721 - Gene3D: G3DSA:3.30.565.10 - Gene3D: G3DSA:3.30.230.10 - PANTHER: PTHR10073 - SMART: SM00387 - TIGRFAMs: TIGR00585
Pfam domain/function: PF01119 DNA_mis_repair; PF02518 HATPase_c; PF08676 MutL_C; SSF55874 ATP_bd_ATPase; SSF54211 Ribosomal_S5_D2-typ_fold
EC number: NA
Molecular weight: Translated: 67945; Mature: 67945
Theoretical pI: Translated: 10.20; Mature: 10.20
Prosite motif: PS00058 DNA_MISMATCH_REPAIR_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQPIRMLSSSLSSQISAGEVIERPSSVIKELLENSIDAQAKNIDISVERSGLNSITVKDD CCHHHHHHHHHHHCCCCHHHHHCHHHHHHHHHHCCCCCCCCCEEEEEEECCCCEEEEECC GFGIEKDQLLLAISRHATSKINRLSDLDNINTFGFRGEALASIRAVSRMKLISCSQNSNI CCCCCHHHEEEEHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHEEEECCCCCE AWSIYSEGFSNHTLLQPIAHPIGTSIIVDNLFYNIPVRLKFIKNERSEFLKIDETIKKIA EEEEECCCCCCCCHHHHHHHHCCCHHEEHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHH LSNFGINIFFKKDKKLFVSYKAITKNNNKIHRLKTVFNQIDLNYVLEIKEKMHNITLFGW HHCCCEEEEEECCCEEEEEEEEEECCCCHHHHHHHHHHHCCHHHHHHHHHHHCCEEEEEE LIFPSSLSSTFKKIQYCYVNNRFVYNNLIKSAVFNSFYEIIGNKRSTSFILYLTLPSNEI EEECHHHHHHHHHEEEEEECCEEHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCEE DINIHPTKNEIKFHKSNIIYFFVYQSILSSLKKCKIKYISNNFFLKTHSNKCKNNNSDSL EEEEECCCCCEEEEECCEEEEEHHHHHHHHHHHCEEEEECCEEEEEECCCCCCCCCCCHH NTKLVSQIHSKYEKKDLYKDVISTDLFKINSQRFLKEYFFSFGKLLIVFQKYYGLMYYSN HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCEEEEEC TFSLISFPLAKKIVEQYKLRSAIKNNMIPEIFSYNFLYFITFKQNKILSNNLKLLLKFGF CHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCEEEEEEEECCCCHHHHHHHHHHHCC NLILKEKYFFLKTIPIFLKNQNLDVLLSSFFSFIFFKKKIYIKDIIKWFDTTILIEKNSW CEEEECCEEHEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCC NYEDGISILLEIEYFCPSIFKKPPLKLLQKINVDEVLCILKV CCCCCCEEEEEEEHHCHHHCCCCCHHHHHHCCCCCEEEEEEC >Mature Secondary Structure MQPIRMLSSSLSSQISAGEVIERPSSVIKELLENSIDAQAKNIDISVERSGLNSITVKDD CCHHHHHHHHHHHCCCCHHHHHCHHHHHHHHHHCCCCCCCCCEEEEEEECCCCEEEEECC GFGIEKDQLLLAISRHATSKINRLSDLDNINTFGFRGEALASIRAVSRMKLISCSQNSNI CCCCCHHHEEEEHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHEEEECCCCCE AWSIYSEGFSNHTLLQPIAHPIGTSIIVDNLFYNIPVRLKFIKNERSEFLKIDETIKKIA EEEEECCCCCCCCHHHHHHHHCCCHHEEHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHH LSNFGINIFFKKDKKLFVSYKAITKNNNKIHRLKTVFNQIDLNYVLEIKEKMHNITLFGW HHCCCEEEEEECCCEEEEEEEEEECCCCHHHHHHHHHHHCCHHHHHHHHHHHCCEEEEEE LIFPSSLSSTFKKIQYCYVNNRFVYNNLIKSAVFNSFYEIIGNKRSTSFILYLTLPSNEI EEECHHHHHHHHHEEEEEECCEEHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCEE DINIHPTKNEIKFHKSNIIYFFVYQSILSSLKKCKIKYISNNFFLKTHSNKCKNNNSDSL EEEEECCCCCEEEEECCEEEEEHHHHHHHHHHHCEEEEECCEEEEEECCCCCCCCCCCHH NTKLVSQIHSKYEKKDLYKDVISTDLFKINSQRFLKEYFFSFGKLLIVFQKYYGLMYYSN HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCEEEEEC TFSLISFPLAKKIVEQYKLRSAIKNNMIPEIFSYNFLYFITFKQNKILSNNLKLLLKFGF CHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCEEEEEEEECCCCHHHHHHHHHHHCC NLILKEKYFFLKTIPIFLKNQNLDVLLSSFFSFIFFKKKIYIKDIIKWFDTTILIEKNSW CEEEECCEEHEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCC NYEDGISILLEIEYFCPSIFKKPPLKLLQKINVDEVLCILKV CCCCCCEEEEEEEHHCHHHCCCCCHHHHHHCCCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12089438