Definition Buchnera aphidicola str. Sg (Schizaphis graminum), complete genome.
Accession NC_004061
Length 641,454

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The map label for this gene is Y281 [C]

Identifier: 21672550

GI number: 21672550

Start: 306733

End: 307635

Strand: Direct

Name: Y281 [C]

Synonym: BUsg270

Alternate gene names: 21672550

Gene position: 306733-307635 (Clockwise)

Preceding gene: 21672541

Following gene: 21672551

Centisome position: 47.82

GC content: 24.7

Gene sequence:

>903_bases
ATGCACAAAATTATAATCATAATGTTGTTTTTTTTAGTTTCAATTACTTGGGGGACAACTTGGATCGCAATGAAAATCGC
AGTAGAAACAATCCCACCTTTTTTTGCGACTGGGATAAGATTTTTAGCAGCCTCTCCATTGTTAATTATACTTTCTTATT
TAACAAAAAAACCTCTTTTATTCCCGTATGGTCAAAGACGTTTTCAAATTTTTATTTCTATCTTTTATTTTTCAATACCT
TTTACATTAATGTTATATGGTGGTAGTTATGTAAATTCTTCTATTTCTTCTATTATATTTGCTAATATGCCTGTTTTAGT
ATTAATAATTTCACATTTCTATTTAAAAAAAAAAATAAATTTTATTCAAAAAGTTGGTATGGTAATTGCTTTAATTACAT
TATTTTTCGTGTTATTAATAGATCTTAAATCGGAATGTTTTTTTCAGTGGAAAGGTATTTTAGCTTTACTTTTAGCATTA
CTTAGTCATGCTGTAATTTACGTTGAATGTCAAAAAAAATCTTGTAATGTATCTGTTATTACATTTAATGCACTACCGTC
TTTAATATCTGGAATATTTTTGTCTATTATATCCTGGTTTATCGAATCTCCTAACATTAATTTTTTTTCTACTAGATCTA
TTTTAGCTGTTTTTTATCTTGGTAATTTTTGTGGTATTTGCGGTATTTTATCTTATTTTTATTTGCAAAAAAGAGTCAGT
TCGTTCTATGCTTCTATAGTTTTTTTAATTTTCCCATTAATTGCAGGTTTTTTAGAAATATATATTTATAAAAAAACAAT
CTTATTGTATGAGTTATGGTTTATTATTCCGTCAGGATTAGGAATATTATTAACTTTAATTCCAATAAATTTTTTTAAAA
ATATTATAAGGTTTTCAAAATGA

Upstream 100 bases:

>100_bases
ATCCTTAAATATTTTATTATTTTTTATAAAAAATAAGATGTAACTATTATTAGTTTAATATGTTATATAGTCTATATTTT
TATTATCTTGGAATTTTAAT

Downstream 100 bases:

>100_bases
CTGCAAAAATACAAAAAATATTATCTGATTTAGGATATGGTTCACGTCGTTTTATTGAATGTATGATTAAATGCGGTAAA
ATAAGTATTAATGGTGAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 300; Mature: 300

Protein sequence:

>300_residues
MHKIIIIMLFFLVSITWGTTWIAMKIAVETIPPFFATGIRFLAASPLLIILSYLTKKPLLFPYGQRRFQIFISIFYFSIP
FTLMLYGGSYVNSSISSIIFANMPVLVLIISHFYLKKKINFIQKVGMVIALITLFFVLLIDLKSECFFQWKGILALLLAL
LSHAVIYVECQKKSCNVSVITFNALPSLISGIFLSIISWFIESPNINFFSTRSILAVFYLGNFCGICGILSYFYLQKRVS
SFYASIVFLIFPLIAGFLEIYIYKKTILLYELWFIIPSGLGILLTLIPINFFKNIIRFSK

Sequences:

>Translated_300_residues
MHKIIIIMLFFLVSITWGTTWIAMKIAVETIPPFFATGIRFLAASPLLIILSYLTKKPLLFPYGQRRFQIFISIFYFSIP
FTLMLYGGSYVNSSISSIIFANMPVLVLIISHFYLKKKINFIQKVGMVIALITLFFVLLIDLKSECFFQWKGILALLLAL
LSHAVIYVECQKKSCNVSVITFNALPSLISGIFLSIISWFIESPNINFFSTRSILAVFYLGNFCGICGILSYFYLQKRVS
SFYASIVFLIFPLIAGFLEIYIYKKTILLYELWFIIPSGLGILLTLIPINFFKNIIRFSK
>Mature_300_residues
MHKIIIIMLFFLVSITWGTTWIAMKIAVETIPPFFATGIRFLAASPLLIILSYLTKKPLLFPYGQRRFQIFISIFYFSIP
FTLMLYGGSYVNSSISSIIFANMPVLVLIISHFYLKKKINFIQKVGMVIALITLFFVLLIDLKSECFFQWKGILALLLAL
LSHAVIYVECQKKSCNVSVITFNALPSLISGIFLSIISWFIESPNINFFSTRSILAVFYLGNFCGICGILSYFYLQKRVS
SFYASIVFLIFPLIAGFLEIYIYKKTILLYELWFIIPSGLGILLTLIPINFFKNIIRFSK

Specific function: Unknown

COG id: COG0697

COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable)

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 DUF6 domains

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y270_BUCAP (P42394)

Other databases:

- EMBL:   Z19055
- EMBL:   AE013218
- PIR:   S36430
- RefSeq:   NP_660617.1
- EnsemblBacteria:   EBBUCT00000000401
- GeneID:   1005473
- GenomeReviews:   AE013218_GR
- KEGG:   bas:BUsg270
- GeneTree:   EBGT00050000008042
- HOGENOM:   HBG303466
- OMA:   WIAMKIA
- ProtClustDB:   CLSK862159
- BioCyc:   BAPH198804:BUSG270-MONOMER
- GO:   GO:0006810
- InterPro:   IPR000620

Pfam domain/function: PF00892 DUF6

EC number: NA

Molecular weight: Translated: 34376; Mature: 34376

Theoretical pI: Translated: 10.12; Mature: 10.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xbb95e08)-; HASH(0xc2bf2dc)-; HASH(0x40473a84)-; HASH(0xc1601f4)-; HASH(0xc42364c)-; HASH(0xb8cca48)-; HASH(0xc059b30)-; HASH(0xbf9d3c8)-; HASH(0xc566a08)-; HASH(0xc132cd4)-;

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHKIIIIMLFFLVSITWGTTWIAMKIAVETIPPFFATGIRFLAASPLLIILSYLTKKPLL
CHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCHHHHHHHHHHHHCHHHHHHHHHHCCCCC
FPYGQRRFQIFISIFYFSIPFTLMLYGGSYVNSSISSIIFANMPVLVLIISHFYLKKKIN
CCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
FIQKVGMVIALITLFFVLLIDLKSECFFQWKGILALLLALLSHAVIYVECQKKSCNVSVI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCEEEE
TFNALPSLISGIFLSIISWFIESPNINFFSTRSILAVFYLGNFCGICGILSYFYLQKRVS
EHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SFYASIVFLIFPLIAGFLEIYIYKKTILLYELWFIIPSGLGILLTLIPINFFKNIIRFSK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCH
>Mature Secondary Structure
MHKIIIIMLFFLVSITWGTTWIAMKIAVETIPPFFATGIRFLAASPLLIILSYLTKKPLL
CHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCHHHHHHHHHHHHCHHHHHHHHHHCCCCC
FPYGQRRFQIFISIFYFSIPFTLMLYGGSYVNSSISSIIFANMPVLVLIISHFYLKKKIN
CCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
FIQKVGMVIALITLFFVLLIDLKSECFFQWKGILALLLALLSHAVIYVECQKKSCNVSVI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCEEEE
TFNALPSLISGIFLSIISWFIESPNINFFSTRSILAVFYLGNFCGICGILSYFYLQKRVS
EHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SFYASIVFLIFPLIAGFLEIYIYKKTILLYELWFIIPSGLGILLTLIPINFFKNIIRFSK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8407819; 12089438