Definition | Buchnera aphidicola str. Sg (Schizaphis graminum), complete genome. |
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Accession | NC_004061 |
Length | 641,454 |
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The map label for this gene is aceE
Identifier: 21672485
GI number: 21672485
Start: 224713
End: 227379
Strand: Direct
Name: aceE
Synonym: BUsg199
Alternate gene names: 21672485
Gene position: 224713-227379 (Clockwise)
Preceding gene: 21672484
Following gene: 21672486
Centisome position: 35.03
GC content: 29.66
Gene sequence:
>2667_bases ATGTCAGAAAAGTTATATAATTATGACGTGGATCCAGTCGAAACTAATGATTGGGTGCAATCAATTGAATCTGTTATTCG TGAAGAAGGTCTTGAAAGAGCTAAATTTTTAATTGAAAAGATCTTAAAAAAATCTAAAATAACTAGAGCAAATTTTTTTA AATGTTTTTTTACAAGTGATTATATTAATACAATTAGTAGCGAAGAAGAAGTTGAATATCCAGGTGATTTAATTTTAGAA AAGCGTATTCGTTCAGCTATTCGTTGGAACGCAATAATGATGGTTTTACGTGCTTCAAAAAAAGATTTAGAATTAGGTGG ACATTTATCATCTTTTCAATCTTCTGCAACAATATATGAAGTATGTTTTAATCATTTTTTTCGTTCTAAAAATGATGAAG ATGGAGGCGATTTAGTTTATTTTCAAGGTCATATTGCTCCAGGTATTTATGCTAGATCTTTTTTAGAAGGCCGTTTATCA AAAAAACAAATTGATAATTTTAGACAAGAAGTTGATGGGAAGGGATTATCTTCTTATCCTCATCCTAAGTTAATGCCAAA TTTTTGGCAATTTCCAACTGTTTCAATGGGATTAGGCCCACTGTGTGCTATTTACCAAGCAAAGTTTTTAAAATACTTGC AGAATCGTGAATTAAAAAATACCTCTAAACAAACGGTTTATGCTTTTTTAGGAGATGGTGAAATGGATGAACCAGAATCT AAAGGAGCAATTTCTATTGCTGTTCGCGAAAAATTAGATAATTTAATTTTTGTAATAAATTGTAACTTACAAAGATTAGA TGGTCCAGTGGTAGGTAATGGAAAAATTGTGAACGAATTAGAAAGTTTTTTTTATGGTGCTGGATGGAAAGTAATAAAAG TTATATGGGGAGGAAAATGGGATTCCTTATTGAAAAAAGATAAAACTGGAAAATTGATTCAACTAATGAATGAAACAATA GACGGTGAATATCAAACATTAAAATCAAAAGATGGAGCATACGTTCGAAAATATTTTTTTGGTAAATATCAAGAAACACT AGAGTTAGTGAAAAACATGACGGATGAAGAAATATGGAATTTAAACAGAGGAGGACATGATCCTAAAAAGATGTTTAATG CACTTAAAAAAGCTAAAGAAATTAAAGATAAACCAACTGTGATTTTGGCACATACAGTGAAAGGATACGGTATGGGTGTT ATTGCTGAAGGGAAAAATATAGCGCATCAAATAAAAAAAATTAATATTAATGGAATTATATATATTAGAGATCGTTTTAA TATTCCTATATCAAATGAAGATATTAAAGAATTACCGTATGTTGTATTTGAAAAAAACTCAAAAGAATACTGCTATATGC ATCAACAAAGAAAAAAACTAGGTGGTTACATTCCATTTCGTTTGTCTAAATTTACTAATGCACTAAACATTCCAGATTTA ATAGATTTTAAATCTTTATTAAAAGAACAAAACAAAAAAATGTCAACAACTATTGCTTTTGTTCGTGTTTTAAATTTAAT TTTAAAGAATCATTCCATTAAAAATTTGATAGTTCCGATTATTGCTGATGAGGCTCGTACATTTGGCATGGAAGGTTTAT TTAGAATGATTGGAATTTATAGTTCTATTGGACAAAAATATGTTCCTCAAGATCGAGAACAATTAGCTTATTATAAAGAA GAAAAAAAAGGACAAATACTGCAAGAAGGAATAAATGAATTAGGTGCTGCTTCATCTTGGTTAGCTGCTGCTACTTCTTA TAGTACTAATGATTTTCCTATGATTCCCTTTTACATTTATTATTCAATATTTGGTTTTCAAAGAATAGGTGATCTTTTTT GGGCTGCTGGAGATCAACAAGCAAGAGGTTTTCTCATTGGAGGAACTTCTGGAAGAACTACTTTAAACGGAGAAGGTTTA CAGCATGAAGATGGTCATAGTCATATACAGTCATTAACGATTCCTAATTGTGTTTCTTATGATCCTGCATTTGCTTATGA AGTTGCCGTTATTATACAGGATGGATTAAGAAGAATGTATGGCCCTCTCCAAGAGAATATATACTATTATATTACAACAA TTAATGAGAATTATTATATGCCTGCTATGCCTCAAGGTGTGGAAAAAGGCATTTGTAAAGGTATTTATAAGTTAAAAACT TTTTATGCCACTGAATTAAAAGTTCAATTAATGGGATCTGGAGCGATTTTACGTTGTATTTGTAAAGCTGGTGAGATTTT GTCTAATGATTATTGTATAACTACAGATATTTATAGTGTAACTTCTTTTACAGAATTAGCTAGAAATGGTGAAGATTGTG AAAGATGGAACATGTTACATCCGTATGAAAAGAAAAGAATTGCTTATATTAAAACTGTAATGAATTCCTCTCCAGCTGTA GCAGCAACTGATTATATGAAGTTATTTGCTGAACAAATTCGTCATTATATTCCATCAAATGAATATCATGTATTGGGTAC AGATGGTTTTGGACGTTCAGATAGTCGTGATAAATTGCGTGATCATTTTGAAGTTAGTGCTTATTATATTGTAGTAGCTG CTTTAAACTTATTAGCTAAATTAAATAATATTAATAAAAAAGTAGTAGAAGAAGCAATTATTAAATTTAATATTAATGCA GATAAAATTAATCCGCGTTTAGCTTAA
Upstream 100 bases:
>100_bases TATTTAATTATATAAAATTAACTATTAATATTACAATAATAATATTTTAAGTCAAATATTCATTTTGTCATTAAATATAA ATACATAAGGAATTTAGACC
Downstream 100 bases:
>100_bases GAGGTGAAAAAAGTGCATATTGAAGTTAAAATGCCTGATATTGGTTTAGAAGAAGTTGAGGTAACAGAAATATTAGTAAA AATTGGTGAAGAAATAAAAT
Product: pyruvate dehydrogenase subunit E1
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 888; Mature: 887
Protein sequence:
>888_residues MSEKLYNYDVDPVETNDWVQSIESVIREEGLERAKFLIEKILKKSKITRANFFKCFFTSDYINTISSEEEVEYPGDLILE KRIRSAIRWNAIMMVLRASKKDLELGGHLSSFQSSATIYEVCFNHFFRSKNDEDGGDLVYFQGHIAPGIYARSFLEGRLS KKQIDNFRQEVDGKGLSSYPHPKLMPNFWQFPTVSMGLGPLCAIYQAKFLKYLQNRELKNTSKQTVYAFLGDGEMDEPES KGAISIAVREKLDNLIFVINCNLQRLDGPVVGNGKIVNELESFFYGAGWKVIKVIWGGKWDSLLKKDKTGKLIQLMNETI DGEYQTLKSKDGAYVRKYFFGKYQETLELVKNMTDEEIWNLNRGGHDPKKMFNALKKAKEIKDKPTVILAHTVKGYGMGV IAEGKNIAHQIKKININGIIYIRDRFNIPISNEDIKELPYVVFEKNSKEYCYMHQQRKKLGGYIPFRLSKFTNALNIPDL IDFKSLLKEQNKKMSTTIAFVRVLNLILKNHSIKNLIVPIIADEARTFGMEGLFRMIGIYSSIGQKYVPQDREQLAYYKE EKKGQILQEGINELGAASSWLAAATSYSTNDFPMIPFYIYYSIFGFQRIGDLFWAAGDQQARGFLIGGTSGRTTLNGEGL QHEDGHSHIQSLTIPNCVSYDPAFAYEVAVIIQDGLRRMYGPLQENIYYYITTINENYYMPAMPQGVEKGICKGIYKLKT FYATELKVQLMGSGAILRCICKAGEILSNDYCITTDIYSVTSFTELARNGEDCERWNMLHPYEKKRIAYIKTVMNSSPAV AATDYMKLFAEQIRHYIPSNEYHVLGTDGFGRSDSRDKLRDHFEVSAYYIVVAALNLLAKLNNINKKVVEEAIIKFNINA DKINPRLA
Sequences:
>Translated_888_residues MSEKLYNYDVDPVETNDWVQSIESVIREEGLERAKFLIEKILKKSKITRANFFKCFFTSDYINTISSEEEVEYPGDLILE KRIRSAIRWNAIMMVLRASKKDLELGGHLSSFQSSATIYEVCFNHFFRSKNDEDGGDLVYFQGHIAPGIYARSFLEGRLS KKQIDNFRQEVDGKGLSSYPHPKLMPNFWQFPTVSMGLGPLCAIYQAKFLKYLQNRELKNTSKQTVYAFLGDGEMDEPES KGAISIAVREKLDNLIFVINCNLQRLDGPVVGNGKIVNELESFFYGAGWKVIKVIWGGKWDSLLKKDKTGKLIQLMNETI DGEYQTLKSKDGAYVRKYFFGKYQETLELVKNMTDEEIWNLNRGGHDPKKMFNALKKAKEIKDKPTVILAHTVKGYGMGV IAEGKNIAHQIKKININGIIYIRDRFNIPISNEDIKELPYVVFEKNSKEYCYMHQQRKKLGGYIPFRLSKFTNALNIPDL IDFKSLLKEQNKKMSTTIAFVRVLNLILKNHSIKNLIVPIIADEARTFGMEGLFRMIGIYSSIGQKYVPQDREQLAYYKE EKKGQILQEGINELGAASSWLAAATSYSTNDFPMIPFYIYYSIFGFQRIGDLFWAAGDQQARGFLIGGTSGRTTLNGEGL QHEDGHSHIQSLTIPNCVSYDPAFAYEVAVIIQDGLRRMYGPLQENIYYYITTINENYYMPAMPQGVEKGICKGIYKLKT FYATELKVQLMGSGAILRCICKAGEILSNDYCITTDIYSVTSFTELARNGEDCERWNMLHPYEKKRIAYIKTVMNSSPAV AATDYMKLFAEQIRHYIPSNEYHVLGTDGFGRSDSRDKLRDHFEVSAYYIVVAALNLLAKLNNINKKVVEEAIIKFNINA DKINPRLA >Mature_887_residues SEKLYNYDVDPVETNDWVQSIESVIREEGLERAKFLIEKILKKSKITRANFFKCFFTSDYINTISSEEEVEYPGDLILEK RIRSAIRWNAIMMVLRASKKDLELGGHLSSFQSSATIYEVCFNHFFRSKNDEDGGDLVYFQGHIAPGIYARSFLEGRLSK KQIDNFRQEVDGKGLSSYPHPKLMPNFWQFPTVSMGLGPLCAIYQAKFLKYLQNRELKNTSKQTVYAFLGDGEMDEPESK GAISIAVREKLDNLIFVINCNLQRLDGPVVGNGKIVNELESFFYGAGWKVIKVIWGGKWDSLLKKDKTGKLIQLMNETID GEYQTLKSKDGAYVRKYFFGKYQETLELVKNMTDEEIWNLNRGGHDPKKMFNALKKAKEIKDKPTVILAHTVKGYGMGVI AEGKNIAHQIKKININGIIYIRDRFNIPISNEDIKELPYVVFEKNSKEYCYMHQQRKKLGGYIPFRLSKFTNALNIPDLI DFKSLLKEQNKKMSTTIAFVRVLNLILKNHSIKNLIVPIIADEARTFGMEGLFRMIGIYSSIGQKYVPQDREQLAYYKEE KKGQILQEGINELGAASSWLAAATSYSTNDFPMIPFYIYYSIFGFQRIGDLFWAAGDQQARGFLIGGTSGRTTLNGEGLQ HEDGHSHIQSLTIPNCVSYDPAFAYEVAVIIQDGLRRMYGPLQENIYYYITTINENYYMPAMPQGVEKGICKGIYKLKTF YATELKVQLMGSGAILRCICKAGEILSNDYCITTDIYSVTSFTELARNGEDCERWNMLHPYEKKRIAYIKTVMNSSPAVA ATDYMKLFAEQIRHYIPSNEYHVLGTDGFGRSDSRDKLRDHFEVSAYYIVVAALNLLAKLNNINKKVVEEAIIKFNINAD KINPRLA
Specific function: The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). It contains multiple copies of three enzymatic components:pyruvate dehydrogenase (E1), dihydrolipoamide acetyltransferase (E2) and lipoamide dehydroge
COG id: COG2609
COG function: function code C; Pyruvate dehydrogenase complex, dehydrogenase (E1) component
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1786304, Length=888, Percent_Identity=73.536036036036, Blast_Score=1410, Evalue=0.0,
Paralogues:
None
Copy number: 1140 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 400 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 6,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): ODP1_BUCAP (Q8K9T9)
Other databases:
- EMBL: AE013218 - RefSeq: NP_660552.1 - ProteinModelPortal: Q8K9T9 - SMR: Q8K9T9 - EnsemblBacteria: EBBUCT00000000201 - GeneID: 1005396 - GenomeReviews: AE013218_GR - KEGG: bas:BUsg199 - GeneTree: EBGT00050000007777 - HOGENOM: HBG289271 - OMA: EVDRHFV - ProtClustDB: PRK09405 - BioCyc: BAPH198804:BUSG199-MONOMER - GO: GO:0006096 - InterPro: IPR004660 - InterPro: IPR009014 - InterPro: IPR015941 - InterPro: IPR005474 - Gene3D: G3DSA:3.40.50.920 - PIRSF: PIRSF000156 - TIGRFAMs: TIGR00759
Pfam domain/function: PF00456 Transketolase_N; SSF52922 Transketo_C_like
EC number: =1.2.4.1
Molecular weight: Translated: 101459; Mature: 101328
Theoretical pI: Translated: 8.80; Mature: 8.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEKLYNYDVDPVETNDWVQSIESVIREEGLERAKFLIEKILKKSKITRANFFKCFFTSD CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHEEEEEEHH YINTISSEEEVEYPGDLILEKRIRSAIRWNAIMMVLRASKKDLELGGHLSSFQSSATIYE HHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCHHHHH VCFNHFFRSKNDEDGGDLVYFQGHIAPGIYARSFLEGRLSKKQIDNFRQEVDGKGLSSYP HHHHHHHCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC HPKLMPNFWQFPTVSMGLGPLCAIYQAKFLKYLQNRELKNTSKQTVYAFLGDGEMDEPES CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCC KGAISIAVREKLDNLIFVINCNLQRLDGPVVGNGKIVNELESFFYGAGWKVIKVIWGGKW CCCEEEEEHHHHCCEEEEEECCCEECCCCCCCCCHHHHHHHHHHHCCCCEEEEEEECCCH DSLLKKDKTGKLIQLMNETIDGEYQTLKSKDGAYVRKYFFGKYQETLELVKNMTDEEIWN HHHHHCCCCCHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHC LNRGGHDPKKMFNALKKAKEIKDKPTVILAHTVKGYGMGVIAEGKNIAHQIKKININGII CCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCEEEECCHHHHHHHHEEECCEEE YIRDRFNIPISNEDIKELPYVVFEKNSKEYCYMHQQRKKLGGYIPFRLSKFTNALNIPDL EEEECCCCCCCCCCHHHCCEEEEECCCCHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCHH IDFKSLLKEQNKKMSTTIAFVRVLNLILKNHSIKNLIVPIIADEARTFGMEGLFRMIGIY HHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCHHHHHHHEEECHHHHHCHHHHHHHHHHH SSIGQKYVPQDREQLAYYKEEKKGQILQEGINELGAASSWLAAATSYSTNDFPMIPFYIY HHHCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCHHHHHH YSIFGFQRIGDLFWAAGDQQARGFLIGGTSGRTTLNGEGLQHEDGHSHIQSLTIPNCVSY HHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCEEECCCCCCCCCCHHHHHHCCCCCCCCC DPAFAYEVAVIIQDGLRRMYGPLQENIYYYITTINENYYMPAMPQGVEKGICKGIYKLKT CCHHHHHHHHHHHHHHHHHHCHHHCCEEEEEEEECCCEECCCCCCHHHHHHHHHHHHHHH FYATELKVQLMGSGAILRCICKAGEILSNDYCITTDIYSVTSFTELARNGEDCERWNMLH HHEEEEEEEEECCCHHHHHHHHHHHHHCCCEEEEECHHHHHHHHHHHCCCCCHHHCCCCC PYEKKRIAYIKTVMNSSPAVAATDYMKLFAEQIRHYIPSNEYHVLGTDGFGRSDSRDKLR CHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHH DHFEVSAYYIVVAALNLLAKLNNINKKVVEEAIIKFNINADKINPRLA HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHEECCCHHCCCCCCC >Mature Secondary Structure SEKLYNYDVDPVETNDWVQSIESVIREEGLERAKFLIEKILKKSKITRANFFKCFFTSD CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHEEEEEEHH YINTISSEEEVEYPGDLILEKRIRSAIRWNAIMMVLRASKKDLELGGHLSSFQSSATIYE HHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCHHHHH VCFNHFFRSKNDEDGGDLVYFQGHIAPGIYARSFLEGRLSKKQIDNFRQEVDGKGLSSYP HHHHHHHCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC HPKLMPNFWQFPTVSMGLGPLCAIYQAKFLKYLQNRELKNTSKQTVYAFLGDGEMDEPES CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCC KGAISIAVREKLDNLIFVINCNLQRLDGPVVGNGKIVNELESFFYGAGWKVIKVIWGGKW CCCEEEEEHHHHCCEEEEEECCCEECCCCCCCCCHHHHHHHHHHHCCCCEEEEEEECCCH DSLLKKDKTGKLIQLMNETIDGEYQTLKSKDGAYVRKYFFGKYQETLELVKNMTDEEIWN HHHHHCCCCCHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHC LNRGGHDPKKMFNALKKAKEIKDKPTVILAHTVKGYGMGVIAEGKNIAHQIKKININGII CCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCEEEECCHHHHHHHHEEECCEEE YIRDRFNIPISNEDIKELPYVVFEKNSKEYCYMHQQRKKLGGYIPFRLSKFTNALNIPDL EEEECCCCCCCCCCHHHCCEEEEECCCCHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCHH IDFKSLLKEQNKKMSTTIAFVRVLNLILKNHSIKNLIVPIIADEARTFGMEGLFRMIGIY HHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCHHHHHHHEEECHHHHHCHHHHHHHHHHH SSIGQKYVPQDREQLAYYKEEKKGQILQEGINELGAASSWLAAATSYSTNDFPMIPFYIY HHHCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCHHHHHH YSIFGFQRIGDLFWAAGDQQARGFLIGGTSGRTTLNGEGLQHEDGHSHIQSLTIPNCVSY HHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCEEECCCCCCCCCCHHHHHHCCCCCCCCC DPAFAYEVAVIIQDGLRRMYGPLQENIYYYITTINENYYMPAMPQGVEKGICKGIYKLKT CCHHHHHHHHHHHHHHHHHHCHHHCCEEEEEEEECCCEECCCCCCHHHHHHHHHHHHHHH FYATELKVQLMGSGAILRCICKAGEILSNDYCITTDIYSVTSFTELARNGEDCERWNMLH HHEEEEEEEEECCCHHHHHHHHHHHHHCCCEEEEECHHHHHHHHHHHCCCCCHHHCCCCC PYEKKRIAYIKTVMNSSPAVAATDYMKLFAEQIRHYIPSNEYHVLGTDGFGRSDSRDKLR CHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHH DHFEVSAYYIVVAALNLLAKLNNINKKVVEEAIIKFNINADKINPRLA HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHEECCCHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12089438