Definition | Buchnera aphidicola str. Sg (Schizaphis graminum), complete genome. |
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Accession | NC_004061 |
Length | 641,454 |
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The map label for this gene is hisD
Identifier: 21672385
GI number: 21672385
Start: 105492
End: 106799
Strand: Direct
Name: hisD
Synonym: BUsg093
Alternate gene names: 21672385
Gene position: 105492-106799 (Clockwise)
Preceding gene: 21672384
Following gene: 21672386
Centisome position: 16.45
GC content: 27.45
Gene sequence:
>1308_bases ATGAAATATTTTAATACAATTGTTAATTGGAATATGTTAAATTCTAATGAACAAAAAAATATTCTATTAAGACCCGTTAT AAAAAACAATAATTCTATCAAAAAAAAAGTAAAAAAAATAATAGAAAATATTCAAGTTTTAGGAGAAAAAGCATTAAGAG AATATACAATTTTATTTGAAAAATGTCATATTAATAAATTTGAAGTTTCTAAAGAAAAAATGTTATCTTCTTCTTTATAC GTCAACCAATCACTAAAAGATGCAATTTCAACTGCTAAAAAAAATATTACATCTTTTCATACAGCTCAAATTTTATCTCC AATAGACATTGAAACTCAAGTTGGAGTACGATGTCAACAGATTTATTTACCATTAAATTCTGTTGGAATTTATATTCCAA GTGGAATTGCTCCTTTGTTTTCTACTGTTTTAATGCTTGCTATACCTGCTAAAATTGCTGGTTGTAAACAAATTATTCTT TGTTCTCCACCTCCTATTGATAATACAATACTTTATGCGGCAAATATTTGTGGTGTCGATAAAATATTTCAAATGGGAGG TGCTCAAGCTATAGCAGCATTAGCTTTTGGTACTAAAAACATTCCTAAAGTAGATAAAATTTTTGGTCCAGGAAATGCTT ATGTTACAGAAGCAAAATTACAAGTTAGTTCTATTTTTAATGGACCTCAAATAGATATGTTGGCTGGACCTTCAGAATTA CTAATCATTGCTGATGAAGCGTCTAATGCTGATTTTATTGCTGCTGATTTATTGTCACAAGCTGAACATAGTATATCTTC TCAAGTCATATTGTTGACACCATCTCTTCAATTAGCTAAAAAAGTTATTATATCTATTAACAATCAGTTAAAAAATCTCT CTAAATCAGATGATATATCAACTGCATTAGATAATAGTGTTATTATTTTAACAAAAGACTTATTTGAATGCATTAAAATA TCAAATATCTATGCTCCTGAACATCTAATTATTCAAACAAAAGAACCAAGATTAATACTTAAAGAAATATTAAATGCTAG TTCAATCTTTTTAGGACCATGGTCTCCTGAATCAGCAGGTGATTATGCATCTGGCACTAATCATGTTTTACCTACTTATG GAAAATCTGTTTCAAGTTCTGCTTTGGGTTTATGTGATTTTAAAAAACGTGTATTAATTCAAGAATTGACATCTCAAGGT TTTATAAATTTATCTAATACGCTTAAAATTCTATCTGAAGCGGAAAAACTTGAAGCACATAAAAATGCTGTAAAAATAAG AGTAGATTTTTTAAAGGAAAAAATATGA
Upstream 100 bases:
>100_bases AGTGAAACATTATTTTGGGAAACGATGGAGAAATTAAAATCTTTAGGTGCTAGTTCAATTTTAGTTTTACCAATTGAAAA AATGATGGAGTAAAAATTTA
Downstream 100 bases:
>100_bases CAGCTAATATAAATAAGTTAGCTCGAAAAAATATACAGAAATTAAACCCTTATCAATCAGCTAGACGAATTGGTGGAAAA GGTGATACATGGTTAAATGC
Product: histidinol dehydrogenase
Products: NA
Alternate protein names: HDH
Number of amino acids: Translated: 435; Mature: 435
Protein sequence:
>435_residues MKYFNTIVNWNMLNSNEQKNILLRPVIKNNNSIKKKVKKIIENIQVLGEKALREYTILFEKCHINKFEVSKEKMLSSSLY VNQSLKDAISTAKKNITSFHTAQILSPIDIETQVGVRCQQIYLPLNSVGIYIPSGIAPLFSTVLMLAIPAKIAGCKQIIL CSPPPIDNTILYAANICGVDKIFQMGGAQAIAALAFGTKNIPKVDKIFGPGNAYVTEAKLQVSSIFNGPQIDMLAGPSEL LIIADEASNADFIAADLLSQAEHSISSQVILLTPSLQLAKKVIISINNQLKNLSKSDDISTALDNSVIILTKDLFECIKI SNIYAPEHLIIQTKEPRLILKEILNASSIFLGPWSPESAGDYASGTNHVLPTYGKSVSSSALGLCDFKKRVLIQELTSQG FINLSNTLKILSEAEKLEAHKNAVKIRVDFLKEKI
Sequences:
>Translated_435_residues MKYFNTIVNWNMLNSNEQKNILLRPVIKNNNSIKKKVKKIIENIQVLGEKALREYTILFEKCHINKFEVSKEKMLSSSLY VNQSLKDAISTAKKNITSFHTAQILSPIDIETQVGVRCQQIYLPLNSVGIYIPSGIAPLFSTVLMLAIPAKIAGCKQIIL CSPPPIDNTILYAANICGVDKIFQMGGAQAIAALAFGTKNIPKVDKIFGPGNAYVTEAKLQVSSIFNGPQIDMLAGPSEL LIIADEASNADFIAADLLSQAEHSISSQVILLTPSLQLAKKVIISINNQLKNLSKSDDISTALDNSVIILTKDLFECIKI SNIYAPEHLIIQTKEPRLILKEILNASSIFLGPWSPESAGDYASGTNHVLPTYGKSVSSSALGLCDFKKRVLIQELTSQG FINLSNTLKILSEAEKLEAHKNAVKIRVDFLKEKI >Mature_435_residues MKYFNTIVNWNMLNSNEQKNILLRPVIKNNNSIKKKVKKIIENIQVLGEKALREYTILFEKCHINKFEVSKEKMLSSSLY VNQSLKDAISTAKKNITSFHTAQILSPIDIETQVGVRCQQIYLPLNSVGIYIPSGIAPLFSTVLMLAIPAKIAGCKQIIL CSPPPIDNTILYAANICGVDKIFQMGGAQAIAALAFGTKNIPKVDKIFGPGNAYVTEAKLQVSSIFNGPQIDMLAGPSEL LIIADEASNADFIAADLLSQAEHSISSQVILLTPSLQLAKKVIISINNQLKNLSKSDDISTALDNSVIILTKDLFECIKI SNIYAPEHLIIQTKEPRLILKEILNASSIFLGPWSPESAGDYASGTNHVLPTYGKSVSSSALGLCDFKKRVLIQELTSQG FINLSNTLKILSEAEKLEAHKNAVKIRVDFLKEKI
Specific function: Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
COG id: COG0141
COG function: function code E; Histidinol dehydrogenase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the histidinol dehydrogenase family
Homologues:
Organism=Escherichia coli, GI1788331, Length=431, Percent_Identity=56.3805104408353, Blast_Score=539, Evalue=1e-154, Organism=Saccharomyces cerevisiae, GI6319819, Length=421, Percent_Identity=41.3301662707838, Blast_Score=313, Evalue=2e-86,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): HISX_BUCAP (Q9ZHE6)
Other databases:
- EMBL: AF067228 - EMBL: AE013218 - RefSeq: NP_660452.1 - ProteinModelPortal: Q9ZHE6 - SMR: Q9ZHE6 - EnsemblBacteria: EBBUCT00000000199 - GeneID: 1005910 - GenomeReviews: AE013218_GR - KEGG: bas:BUsg093 - GeneTree: EBGT00050000008005 - HOGENOM: HBG329596 - OMA: MIRIARV - ProtClustDB: PRK00877 - BioCyc: BAPH198804:BUSG093-MONOMER - HAMAP: MF_01024 - InterPro: IPR016161 - InterPro: IPR022695 - InterPro: IPR001692 - InterPro: IPR012131 - PANTHER: PTHR21256:SF2 - PIRSF: PIRSF000099 - PRINTS: PR00083 - TIGRFAMs: TIGR00069
Pfam domain/function: PF00815 Histidinol_dh; SSF53720 Aldehyde_DH/Histidinol_DH
EC number: =1.1.1.23
Molecular weight: Translated: 47738; Mature: 47738
Theoretical pI: Translated: 9.09; Mature: 9.09
Prosite motif: PS00611 HISOL_DEHYDROGENASE; PS00599 AA_TRANSFER_CLASS_2
Important sites: ACT_SITE 327-327 ACT_SITE 328-328 BINDING 131-131 BINDING 189-189 BINDING 212-212 BINDING 238-238 BINDING 260-260 BINDING 263-263 BINDING 328-328 BINDING 361-361 BINDING 415-415 BINDING 420-420
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKYFNTIVNWNMLNSNEQKNILLRPVIKNNNSIKKKVKKIIENIQVLGEKALREYTILFE CCHHHHEEEEEEECCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KCHINKFEVSKEKMLSSSLYVNQSLKDAISTAKKNITSFHTAQILSPIDIETQVGVRCQQ HHCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEE IYLPLNSVGIYIPSGIAPLFSTVLMLAIPAKIAGCKQIILCSPPPIDNTILYAANICGVD EEEEHHHCCEEECCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCEEEEEECCCCHH KIFQMGGAQAIAALAFGTKNIPKVDKIFGPGNAYVTEAKLQVSSIFNGPQIDMLAGPSEL HHHHCCCHHHHHHHHHCCCCCCCHHHHCCCCCCEEEEEEEEEEHHCCCCCEEEEECCCEE LIIADEASNADFIAADLLSQAEHSISSQVILLTPSLQLAKKVIISINNQLKNLSKSDDIS EEEEECCCCCCHHHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHHHHCCCCCCCHH TALDNSVIILTKDLFECIKISNIYAPEHLIIQTKEPRLILKEILNASSIFLGPWSPESAG HHHCCCEEEEEHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHCCCCCEEECCCCCCCCC DYASGTNHVLPTYGKSVSSSALGLCDFKKRVLIQELTSQGFINLSNTLKILSEAEKLEAH CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHH KNAVKIRVDFLKEKI HCCEEEEEHHHHHCC >Mature Secondary Structure MKYFNTIVNWNMLNSNEQKNILLRPVIKNNNSIKKKVKKIIENIQVLGEKALREYTILFE CCHHHHEEEEEEECCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KCHINKFEVSKEKMLSSSLYVNQSLKDAISTAKKNITSFHTAQILSPIDIETQVGVRCQQ HHCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEE IYLPLNSVGIYIPSGIAPLFSTVLMLAIPAKIAGCKQIILCSPPPIDNTILYAANICGVD EEEEHHHCCEEECCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCEEEEEECCCCHH KIFQMGGAQAIAALAFGTKNIPKVDKIFGPGNAYVTEAKLQVSSIFNGPQIDMLAGPSEL HHHHCCCHHHHHHHHHCCCCCCCHHHHCCCCCCEEEEEEEEEEHHCCCCCEEEEECCCEE LIIADEASNADFIAADLLSQAEHSISSQVILLTPSLQLAKKVIISINNQLKNLSKSDDIS EEEEECCCCCCHHHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHHHHCCCCCCCHH TALDNSVIILTKDLFECIKISNIYAPEHLIIQTKEPRLILKEILNASSIFLGPWSPESAG HHHCCCEEEEEHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHCCCCCEEECCCCCCCCC DYASGTNHVLPTYGKSVSSSALGLCDFKKRVLIQELTSQGFINLSNTLKILSEAEKLEAH CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHH KNAVKIRVDFLKEKI HCCEEEEEHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9767718; 12089438