Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21226793

Identifier: 21226793

GI number: 21226793

Start: 829810

End: 831009

Strand: Direct

Name: 21226793

Synonym: MM_0691

Alternate gene names: NA

Gene position: 829810-831009 (Clockwise)

Preceding gene: 21226792

Following gene: 21226794

Centisome position: 20.26

GC content: 48.83

Gene sequence:

>1200_bases
ATGCAGAATATCCTTGCAATTGGCTTTGACACGCGAAACATTGTCTGCTCCGCAAGCAGGGCAGGCTATACTGTCTGCTC
CATAGATGCATTCCGTGACCTTGACCTTCAGGAATGTGCATATGCATCAGCTCTTCTCGAATGCAGGACTTCAGGCGAAC
TCCGCCAGCTTGACCCTGGATGGATAGTAGCTAAAATGAATGGTTTCGGGCTTGACTTTGATGCCATCGTGCCTGGCTCG
GGGATGGAGATGCTGGACCCGTCTCGTTTTCCCTGCCCCGTGCTTGCCAGCAGCCCTGAAGCAGTGAAGGAAGCTTCAAA
CAAGCTTCACCTTGCAAAAAGGCTTGAAGCTATGGGAATGCCACATCCTCGCTGTTATTCTTCCAACGAGCCGGAAGCAA
TCGAATATCCTGTTATTCTCAAACCGGCTACAGGAGGAGGAGGGATATTCAACAGGGTTGCAAATAACAGACAGGAAATG
CTGGAAGTGCTGGAAGAATTATCCGGTCCTGACCAGGGCCTTACGGAAAATGAAATCGTGATTCAGCAGTTTCTGGAAGG
AACCCCTTCAAGCGTCTCTGTGCTTTCTACAAAGGATGAAGCCCTGGCAGTTGCTGTGAACGAGCAATTAACAGGCATAC
CCTGGCTTTCAAGGCTGCCGTTTGCCTACTGCGGAAATATAACCCCTTTCATAACAGAGTACGCAGAAGAGATGGAAAAA
CTTGCAGAAGAACTGATACTTGAACTCGGGCTCCTCGGGTCATGTGGAGTTGATTTTCTGGTCACAGAACAGGGGCCTGT
GGTGCTTGAAGTAAATCCCAGGTTCCAGGGAAGCCTGGACACGGTTGAGAAAGCGATGGGAATTAACCTTTTCGAAGCTC
ATGCCGGTTGTTTCAGGGGAGAACTTCCTGAAAAACCGAAAGCAAAACTATTTGCAGCAAGAGGAGTTCTTTATTCGGAT
CGAGAGCTTTTTATAGACAGAAAACTCATGGAAGTCATTCTCAGGGAAAAAAGCGCGGACATTCCGCCTCAGAAAACTGT
TATCGAGCCTGATTGGCCTCTGACCTCCCTGTTTGAATTCGCCTCAACAAGAGAAGAGGCAATCAAATCTCTCGAGGGAG
GGGCAGAGCGGATAAAGACTTTTATTGCAGAACGAATTACAGGAAAAGCAGAGTCCCTGAGTCCTGCCGGAGAAGCATGA

Upstream 100 bases:

>100_bases
AGGCGGGAAGCGAGATTCCTGTCCTGAAAACAGAATATGGAATCTTTGCACTGGCACACACCGATATTCCGCAGGAAAAA
TAAAAGTTTAACGAGGAAAT

Downstream 100 bases:

>100_bases
GGTTCAGCTGCTGAGATTGCAGTTTTTTCCGGACATGGAATCTTTTAAATAAAAATTTTAATGTAAGCTTTAATAATGGT
ATGTTCAATTCATATAAGGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 399; Mature: 399

Protein sequence:

>399_residues
MQNILAIGFDTRNIVCSASRAGYTVCSIDAFRDLDLQECAYASALLECRTSGELRQLDPGWIVAKMNGFGLDFDAIVPGS
GMEMLDPSRFPCPVLASSPEAVKEASNKLHLAKRLEAMGMPHPRCYSSNEPEAIEYPVILKPATGGGGIFNRVANNRQEM
LEVLEELSGPDQGLTENEIVIQQFLEGTPSSVSVLSTKDEALAVAVNEQLTGIPWLSRLPFAYCGNITPFITEYAEEMEK
LAEELILELGLLGSCGVDFLVTEQGPVVLEVNPRFQGSLDTVEKAMGINLFEAHAGCFRGELPEKPKAKLFAARGVLYSD
RELFIDRKLMEVILREKSADIPPQKTVIEPDWPLTSLFEFASTREEAIKSLEGGAERIKTFIAERITGKAESLSPAGEA

Sequences:

>Translated_399_residues
MQNILAIGFDTRNIVCSASRAGYTVCSIDAFRDLDLQECAYASALLECRTSGELRQLDPGWIVAKMNGFGLDFDAIVPGS
GMEMLDPSRFPCPVLASSPEAVKEASNKLHLAKRLEAMGMPHPRCYSSNEPEAIEYPVILKPATGGGGIFNRVANNRQEM
LEVLEELSGPDQGLTENEIVIQQFLEGTPSSVSVLSTKDEALAVAVNEQLTGIPWLSRLPFAYCGNITPFITEYAEEMEK
LAEELILELGLLGSCGVDFLVTEQGPVVLEVNPRFQGSLDTVEKAMGINLFEAHAGCFRGELPEKPKAKLFAARGVLYSD
RELFIDRKLMEVILREKSADIPPQKTVIEPDWPLTSLFEFASTREEAIKSLEGGAERIKTFIAERITGKAESLSPAGEA
>Mature_399_residues
MQNILAIGFDTRNIVCSASRAGYTVCSIDAFRDLDLQECAYASALLECRTSGELRQLDPGWIVAKMNGFGLDFDAIVPGS
GMEMLDPSRFPCPVLASSPEAVKEASNKLHLAKRLEAMGMPHPRCYSSNEPEAIEYPVILKPATGGGGIFNRVANNRQEM
LEVLEELSGPDQGLTENEIVIQQFLEGTPSSVSVLSTKDEALAVAVNEQLTGIPWLSRLPFAYCGNITPFITEYAEEMEK
LAEELILELGLLGSCGVDFLVTEQGPVVLEVNPRFQGSLDTVEKAMGINLFEAHAGCFRGELPEKPKAKLFAARGVLYSD
RELFIDRKLMEVILREKSADIPPQKTVIEPDWPLTSLFEFASTREEAIKSLEGGAERIKTFIAERITGKAESLSPAGEA

Specific function: Unknown

COG id: COG2232

COG function: function code R; Predicted ATP-dependent carboligase related to biotin carboxylase

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ATP-grasp domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011761
- InterPro:   IPR003806
- InterPro:   IPR013815
- InterPro:   IPR013816
- InterPro:   IPR016677 [H]

Pfam domain/function: PF02655 ATP-grasp_3 [H]

EC number: NA

Molecular weight: Translated: 43609; Mature: 43609

Theoretical pI: Translated: 4.36; Mature: 4.36

Prosite motif: PS50975 ATP_GRASP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQNILAIGFDTRNIVCSASRAGYTVCSIDAFRDLDLQECAYASALLECRTSGELRQLDPG
CCCEEEEECCCCCEEEECCCCCCEEEEEHHHHCCCHHHHHHHHHHHHHHCCCCCEECCCC
WIVAKMNGFGLDFDAIVPGSGMEMLDPSRFPCPVLASSPEAVKEASNKLHLAKRLEAMGM
EEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
PHPRCYSSNEPEAIEYPVILKPATGGGGIFNRVANNRQEMLEVLEELSGPDQGLTENEIV
CCCCCCCCCCCCEEECCEEEEECCCCCHHHHHHHCCHHHHHHHHHHHCCCCCCCCCHHHH
IQQFLEGTPSSVSVLSTKDEALAVAVNEQLTGIPWLSRLPFAYCGNITPFITEYAEEMEK
HHHHHCCCCCCEEEEECCCCEEEEEECCCCCCCCHHHHCCHHHHCCCCHHHHHHHHHHHH
LAEELILELGLLGSCGVDFLVTEQGPVVLEVNPRFQGSLDTVEKAMGINLFEAHAGCFRG
HHHHHHHHHCCCCCCCCCEEEECCCCEEEEECCCCCCCHHHHHHHHCCCHHHHHCCHHCC
ELPEKPKAKLFAARGVLYSDRELFIDRKLMEVILREKSADIPPQKTVIEPDWPLTSLFEF
CCCCCCHHHHHHHCCCEECCHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCCHHHHHHH
ASTREEAIKSLEGGAERIKTFIAERITGKAESLSPAGEA
HHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHCCCCCCCC
>Mature Secondary Structure
MQNILAIGFDTRNIVCSASRAGYTVCSIDAFRDLDLQECAYASALLECRTSGELRQLDPG
CCCEEEEECCCCCEEEECCCCCCEEEEEHHHHCCCHHHHHHHHHHHHHHCCCCCEECCCC
WIVAKMNGFGLDFDAIVPGSGMEMLDPSRFPCPVLASSPEAVKEASNKLHLAKRLEAMGM
EEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
PHPRCYSSNEPEAIEYPVILKPATGGGGIFNRVANNRQEMLEVLEELSGPDQGLTENEIV
CCCCCCCCCCCCEEECCEEEEECCCCCHHHHHHHCCHHHHHHHHHHHCCCCCCCCCHHHH
IQQFLEGTPSSVSVLSTKDEALAVAVNEQLTGIPWLSRLPFAYCGNITPFITEYAEEMEK
HHHHHCCCCCCEEEEECCCCEEEEEECCCCCCCCHHHHCCHHHHCCCCHHHHHHHHHHHH
LAEELILELGLLGSCGVDFLVTEQGPVVLEVNPRFQGSLDTVEKAMGINLFEAHAGCFRG
HHHHHHHHHCCCCCCCCCEEEECCCCEEEEECCCCCCCHHHHHHHHCCCHHHHHCCHHCC
ELPEKPKAKLFAARGVLYSDRELFIDRKLMEVILREKSADIPPQKTVIEPDWPLTSLFEF
CCCCCCHHHHHHHCCCEECCHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCCHHHHHHH
ASTREEAIKSLEGGAERIKTFIAERITGKAESLSPAGEA
HHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]