Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21226709

Identifier: 21226709

GI number: 21226709

Start: 738207

End: 738368

Strand: Reverse

Name: 21226709

Synonym: MM_0607

Alternate gene names: NA

Gene position: 738368-738207 (Counterclockwise)

Preceding gene: 21226712

Following gene: 21226708

Centisome position: 18.03

GC content: 40.74

Gene sequence:

>162_bases
GTGGTTTTCGGCTGTAAAAGGTGCGGCAAGTGCAGGGATGTATGTCCTGTGGGCGCTATTTATGAAGAAAACGAGCTTGC
TAAAATCGATACTGAAAAATGTAACCTCTGCATGAAATGCATAGACGAATGTACCAACAGATCCATTATTTATATGGAAT
GA

Upstream 100 bases:

>100_bases
ATGATTTTTTATGAAATATAATTTCCCTGTGCCTGTTCAGAAACTAATATATTCTTCAGCTTCCAAAGGTTCACTGATGT
CAGAGATGAATGGGTATGTT

Downstream 100 bases:

>100_bases
TGTGACAGCAAAGCAAGATGGGAACTGAAGAAAATTAGAATGAATTTAGAGAAAAAACTAAAATGAAACCTAAAAGAGTC
AGAAAATTCAGGAAAAGGTG

Product: ferredoxin

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 53; Mature: 53

Protein sequence:

>53_residues
MVFGCKRCGKCRDVCPVGAIYEENELAKIDTEKCNLCMKCIDECTNRSIIYME

Sequences:

>Translated_53_residues
MVFGCKRCGKCRDVCPVGAIYEENELAKIDTEKCNLCMKCIDECTNRSIIYME
>Mature_53_residues
MVFGCKRCGKCRDVCPVGAIYEENELAKIDTEKCNLCMKCIDECTNRSIIYME

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 6071; Mature: 6071

Theoretical pI: Translated: 4.97; Mature: 4.97

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

15.1 %Cys     (Translated Protein)
5.7 %Met     (Translated Protein)
20.8 %Cys+Met (Translated Protein)
15.1 %Cys     (Mature Protein)
5.7 %Met     (Mature Protein)
20.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVFGCKRCGKCRDVCPVGAIYEENELAKIDTEKCNLCMKCIDECTNRSIIYME
CCCCCCCCCCCCCCCCCCCEECCCCCEECCCHHHHHHHHHHHHHCCCCEEEEC
>Mature Secondary Structure
MVFGCKRCGKCRDVCPVGAIYEENELAKIDTEKCNLCMKCIDECTNRSIIYME
CCCCCCCCCCCCCCCCCCCEECCCCCEECCCHHHHHHHHHHHHHCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA