Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

Click here to switch to the map view.

The map label for this gene is 21226649

Identifier: 21226649

GI number: 21226649

Start: 675845

End: 676567

Strand: Direct

Name: 21226649

Synonym: MM_0547

Alternate gene names: NA

Gene position: 675845-676567 (Clockwise)

Preceding gene: 21226648

Following gene: 21226650

Centisome position: 16.5

GC content: 49.65

Gene sequence:

>723_bases
ATGCGAATCTATAAAATCATCTTTTTTGTCACAGCGGTTTCGCAGATTTTCAGCATTTTTTTCTCGTCTTTTAGCGGAGG
CAGTAATTTCAATGAACTGCTCATCACCCCAGCCGGGTATACTTTTGCCATTTGGGGAGTGATAACCATGTTTTCAAGCA
TCTACGCGCTGCTGCATCTCTTTGGCACACGGACATTTTCAAGGCCGGTGTATCTCTGGCTCTCGTCGGTATACGTCTGT
TTTACCCTCTGGCTCATGGCGGCTGAGCGGGAATTGCTGCTGTTGACGGTGCTCATTTTCCTCTTTATGTACTTCGCTTT
GCTCAAGGCGTTTCCCCAACTATTGGAACAGGGTTTTGCGAATATCCAGGAGAAGCTATTCCTGCAGGGCGGAGTCGGGA
TGTATCTGGGGTGGTCAAGCGTTGCGGTGCTAGCTAATATCGGCGTGTATGCTTTTTCCTTTGGCATCCAGAGTAGCTCC
CAGCTCGGAATCTATCTTCAAATGCTCCTCGTGCTTCTCGCGGCGCTCTCTGCGGGCTACGCACTCTATCAAAGCAAGCG
CAACGCCGTGGTGTTCGCCACCCACTGGTGGGCCTTTGTCGGGATTCTCGTGGGACTTTTTTCTAGGGAGCAGACCGAAC
TCCTGATCGCCTGGACGCTCGTCTGCGTTGTCGGACTGAACGTGTTTTATTTCAAAAAGCGGTTGAGATCTATAAAAAAT
TAA

Upstream 100 bases:

>100_bases
CCAAAATGCTGATTGAAATTTACGGGCAAAAAACTCAAAAGAACATCGCCAAACTTTGGGCAGAATAATTAAAATGCTAT
GAACATCCAACCATAACAAT

Downstream 100 bases:

>100_bases
CAATTGAATAAACCAAAAACAAAAACCATTATTATCGCCATTATTTCCTTTTTTGTAGTTCCCCTGGTAGGTTTGTGGCT
CTTCGCTGTTTTGTGTGGGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 240; Mature: 240

Protein sequence:

>240_residues
MRIYKIIFFVTAVSQIFSIFFSSFSGGSNFNELLITPAGYTFAIWGVITMFSSIYALLHLFGTRTFSRPVYLWLSSVYVC
FTLWLMAAERELLLLTVLIFLFMYFALLKAFPQLLEQGFANIQEKLFLQGGVGMYLGWSSVAVLANIGVYAFSFGIQSSS
QLGIYLQMLLVLLAALSAGYALYQSKRNAVVFATHWWAFVGILVGLFSREQTELLIAWTLVCVVGLNVFYFKKRLRSIKN

Sequences:

>Translated_240_residues
MRIYKIIFFVTAVSQIFSIFFSSFSGGSNFNELLITPAGYTFAIWGVITMFSSIYALLHLFGTRTFSRPVYLWLSSVYVC
FTLWLMAAERELLLLTVLIFLFMYFALLKAFPQLLEQGFANIQEKLFLQGGVGMYLGWSSVAVLANIGVYAFSFGIQSSS
QLGIYLQMLLVLLAALSAGYALYQSKRNAVVFATHWWAFVGILVGLFSREQTELLIAWTLVCVVGLNVFYFKKRLRSIKN
>Mature_240_residues
MRIYKIIFFVTAVSQIFSIFFSSFSGGSNFNELLITPAGYTFAIWGVITMFSSIYALLHLFGTRTFSRPVYLWLSSVYVC
FTLWLMAAERELLLLTVLIFLFMYFALLKAFPQLLEQGFANIQEKLFLQGGVGMYLGWSSVAVLANIGVYAFSFGIQSSS
QLGIYLQMLLVLLAALSAGYALYQSKRNAVVFATHWWAFVGILVGLFSREQTELLIAWTLVCVVGLNVFYFKKRLRSIKN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27188; Mature: 27188

Theoretical pI: Translated: 9.86; Mature: 9.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIYKIIFFVTAVSQIFSIFFSSFSGGSNFNELLITPAGYTFAIWGVITMFSSIYALLHL
CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHH
FGTRTFSRPVYLWLSSVYVCFTLWLMAAERELLLLTVLIFLFMYFALLKAFPQLLEQGFA
HHCHHCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NIQEKLFLQGGVGMYLGWSSVAVLANIGVYAFSFGIQSSSQLGIYLQMLLVLLAALSAGY
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH
ALYQSKRNAVVFATHWWAFVGILVGLFSREQTELLIAWTLVCVVGLNVFYFKKRLRSIKN
HHHHCCCCEEEEEHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MRIYKIIFFVTAVSQIFSIFFSSFSGGSNFNELLITPAGYTFAIWGVITMFSSIYALLHL
CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHH
FGTRTFSRPVYLWLSSVYVCFTLWLMAAERELLLLTVLIFLFMYFALLKAFPQLLEQGFA
HHCHHCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NIQEKLFLQGGVGMYLGWSSVAVLANIGVYAFSFGIQSSSQLGIYLQMLLVLLAALSAGY
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH
ALYQSKRNAVVFATHWWAFVGILVGLFSREQTELLIAWTLVCVVGLNVFYFKKRLRSIKN
HHHHCCCCEEEEEHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA