Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21226626

Identifier: 21226626

GI number: 21226626

Start: 651915

End: 653207

Strand: Reverse

Name: 21226626

Synonym: MM_0524

Alternate gene names: NA

Gene position: 653207-651915 (Counterclockwise)

Preceding gene: 21226627

Following gene: 21226625

Centisome position: 15.95

GC content: 49.27

Gene sequence:

>1293_bases
ATGCGTCTGGTCCAGGTGCTTATACCCGAAGGGAAACGCGAGTCTGTCTTGAGCGTTCTTGATAATGAACAGATCGACTA
TGCTGTCTGGGATGAAACAGGAAGAGGGGATTTCGAAGCTCTTGTTCAGTTCCCTATTCCCTCCATAGGCGTCGAGCCCA
TACTTGACAAACTCCGCGAAGCCGGGGTAATTAGGGGAGTTTACACCATAGTATTGTCTCCTGAAACGGTAATTTCCGAG
CATATAGATATGCTGAAGAGCCGGTATGCAGGGGAACGTATTTCAAGGGAAGAACTGATTGCGCGTGCACGGAGCCTTGC
ACCTGCAGCTTCAACCTATTTTGCTTTTCTGATCCTGAGCACGATCATTGCAACTGCCGGGCTTTTGCTAGATTCGGCTG
CGACGATTATAGGGGCAATGGTAGTGGCTCCGTTGATGGGACCTGCAATAACTGCCAGTGTCGGGACGGTTGTGGATGAC
AGGAAGCTTGCCTCTCGAGGAGTAGTGCTTCAGGTCACAGGTCTCGTGATGGCAATTGCAGTTTCTGCACTCGTAGGTTT
CTTTATCAAGGAATCTTTCTTCCTGCCTCCTGGCCTCGATATTCGGGATGTGACCCAGATTGCTGAACGCATAAGCCCCA
ATTTCCTTTATGTGTTGCTTGCCCTGGGGTCCGGCCTTGCAGGCGCTATCAGCGTAATTCGAAACGTAGGATCTGCTCTT
GTAGGAGTTGCCATCGCCATTGCTCTTATCCCTCCTGCCGCAACATCAGGGCTTGGAATTGCATGGGGACTGCCTGGGGT
GGCTCTTGCTGCTGCTTTGCTTGTGGTCATCAACATGCTTGCAGTCAATGTCTCTACACTTGTCCTGTTCTGGCTTTCCG
GGTTCAGGCCGCCTGAATTCTCTGCAATCAACCATGCACGTTATGCCGTGATCTCCCGCAGTGCTCTTCTCCTTATTGCA
ATCACCATTCTTTCTGTAGTTCTGATCCTTGTCAGTTTTTCATCCTACCAGACCTATGTAATTGAACAGAAGGTGAACGA
GGAAGTCAATTACATGTTTGAAGAGCCCATGTACAGTGGAATTGGGCTGACACCTGTCGAAGTCTCTATAGGTTACGACT
CTGGCAATATCCTTTTAGAAGAACCTGTAAGGGTTGATATTGTTGTGGCCCATCCTGCAGCACAGGAAGTCCCGGAGGAT
ATTGCAATTCAAATAGACAGACGCCTCACTGAGGCTATAAATAGAAATTTCGAGGTCAGAGTCGGTTTCGTTGAGACTCA
GCAGACTGCATAA

Upstream 100 bases:

>100_bases
ATGGCTCCCGGGTGTTTTTTCCGGAACAATTCTTACTCTGCGCGGGTTAATACCGATTATTCTTTACAATTCATATATCC
AGACAGCTTTATATTATATC

Downstream 100 bases:

>100_bases
AATTCGTTATTTTTGTGTAATTTAAAGCGAGAAGATGGGAGTGAAAAGATAGACGAGCCTGCTTTTTACTGCTGTGCCCA
GAATTTTATTGATCGAATCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 430; Mature: 430

Protein sequence:

>430_residues
MRLVQVLIPEGKRESVLSVLDNEQIDYAVWDETGRGDFEALVQFPIPSIGVEPILDKLREAGVIRGVYTIVLSPETVISE
HIDMLKSRYAGERISREELIARARSLAPAASTYFAFLILSTIIATAGLLLDSAATIIGAMVVAPLMGPAITASVGTVVDD
RKLASRGVVLQVTGLVMAIAVSALVGFFIKESFFLPPGLDIRDVTQIAERISPNFLYVLLALGSGLAGAISVIRNVGSAL
VGVAIAIALIPPAATSGLGIAWGLPGVALAAALLVVINMLAVNVSTLVLFWLSGFRPPEFSAINHARYAVISRSALLLIA
ITILSVVLILVSFSSYQTYVIEQKVNEEVNYMFEEPMYSGIGLTPVEVSIGYDSGNILLEEPVRVDIVVAHPAAQEVPED
IAIQIDRRLTEAINRNFEVRVGFVETQQTA

Sequences:

>Translated_430_residues
MRLVQVLIPEGKRESVLSVLDNEQIDYAVWDETGRGDFEALVQFPIPSIGVEPILDKLREAGVIRGVYTIVLSPETVISE
HIDMLKSRYAGERISREELIARARSLAPAASTYFAFLILSTIIATAGLLLDSAATIIGAMVVAPLMGPAITASVGTVVDD
RKLASRGVVLQVTGLVMAIAVSALVGFFIKESFFLPPGLDIRDVTQIAERISPNFLYVLLALGSGLAGAISVIRNVGSAL
VGVAIAIALIPPAATSGLGIAWGLPGVALAAALLVVINMLAVNVSTLVLFWLSGFRPPEFSAINHARYAVISRSALLLIA
ITILSVVLILVSFSSYQTYVIEQKVNEEVNYMFEEPMYSGIGLTPVEVSIGYDSGNILLEEPVRVDIVVAHPAAQEVPED
IAIQIDRRLTEAINRNFEVRVGFVETQQTA
>Mature_430_residues
MRLVQVLIPEGKRESVLSVLDNEQIDYAVWDETGRGDFEALVQFPIPSIGVEPILDKLREAGVIRGVYTIVLSPETVISE
HIDMLKSRYAGERISREELIARARSLAPAASTYFAFLILSTIIATAGLLLDSAATIIGAMVVAPLMGPAITASVGTVVDD
RKLASRGVVLQVTGLVMAIAVSALVGFFIKESFFLPPGLDIRDVTQIAERISPNFLYVLLALGSGLAGAISVIRNVGSAL
VGVAIAIALIPPAATSGLGIAWGLPGVALAAALLVVINMLAVNVSTLVLFWLSGFRPPEFSAINHARYAVISRSALLLIA
ITILSVVLILVSFSSYQTYVIEQKVNEEVNYMFEEPMYSGIGLTPVEVSIGYDSGNILLEEPVRVDIVVAHPAAQEVPED
IAIQIDRRLTEAINRNFEVRVGFVETQQTA

Specific function: Unknown

COG id: COG1808

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Drosophila melanogaster, GI19921100, Length=193, Percent_Identity=33.160621761658, Blast_Score=76, Evalue=3e-14,
Organism=Drosophila melanogaster, GI20129117, Length=181, Percent_Identity=32.5966850828729, Blast_Score=74, Evalue=2e-13,
Organism=Drosophila melanogaster, GI281364738, Length=339, Percent_Identity=22.1238938053097, Blast_Score=70, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005233
- InterPro:   IPR013031
- InterPro:   IPR005240 [H]

Pfam domain/function: PF04087 DUF389 [H]

EC number: NA

Molecular weight: Translated: 46076; Mature: 46076

Theoretical pI: Translated: 4.50; Mature: 4.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLVQVLIPEGKRESVLSVLDNEQIDYAVWDETGRGDFEALVQFPIPSIGVEPILDKLRE
CCEEEEECCCCCHHHHHHHHCCCCCCEEEECCCCCCCHHHHHCCCCCCCCHHHHHHHHHH
AGVIRGVYTIVLSPETVISEHIDMLKSRYAGERISREELIARARSLAPAASTYFAFLILS
CCHHEEEEEEEECCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHH
TIIATAGLLLDSAATIIGAMVVAPLMGPAITASVGTVVDDRKLASRGVVLQVTGLVMAIA
HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHCCEEEEHHHHHHHHH
VSALVGFFIKESFFLPPGLDIRDVTQIAERISPNFLYVLLALGSGLAGAISVIRNVGSAL
HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHH
VGVAIAIALIPPAATSGLGIAWGLPGVALAAALLVVINMLAVNVSTLVLFWLSGFRPPEF
HHHHHHHHHCCCCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
SAINHARYAVISRSALLLIAITILSVVLILVSFSSYQTYVIEQKVNEEVNYMFEEPMYSG
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEEHHHHHCHHHHHHHHCCCCCC
IGLTPVEVSIGYDSGNILLEEPVRVDIVVAHPAAQEVPEDIAIQIDRRLTEAINRNFEVR
CCCCEEEEEEEECCCCEEEECCCEEEEEEECCCHHHCCHHHHHHHHHHHHHHHCCCCEEE
VGFVETQQTA
EEEEECCCCC
>Mature Secondary Structure
MRLVQVLIPEGKRESVLSVLDNEQIDYAVWDETGRGDFEALVQFPIPSIGVEPILDKLRE
CCEEEEECCCCCHHHHHHHHCCCCCCEEEECCCCCCCHHHHHCCCCCCCCHHHHHHHHHH
AGVIRGVYTIVLSPETVISEHIDMLKSRYAGERISREELIARARSLAPAASTYFAFLILS
CCHHEEEEEEEECCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHH
TIIATAGLLLDSAATIIGAMVVAPLMGPAITASVGTVVDDRKLASRGVVLQVTGLVMAIA
HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHCCEEEEHHHHHHHHH
VSALVGFFIKESFFLPPGLDIRDVTQIAERISPNFLYVLLALGSGLAGAISVIRNVGSAL
HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHH
VGVAIAIALIPPAATSGLGIAWGLPGVALAAALLVVINMLAVNVSTLVLFWLSGFRPPEF
HHHHHHHHHCCCCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
SAINHARYAVISRSALLLIAITILSVVLILVSFSSYQTYVIEQKVNEEVNYMFEEPMYSG
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEEHHHHHCHHHHHHHHCCCCCC
IGLTPVEVSIGYDSGNILLEEPVRVDIVVAHPAAQEVPEDIAIQIDRRLTEAINRNFEVR
CCCCEEEEEEEECCCCEEEECCCEEEEEEECCCHHHCCHHHHHHHHHHHHHHHCCCCEEE
VGFVETQQTA
EEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]